RNA–Protein interactions for RNA: ENST00000463477.5

PTPRD-207, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

TSL 1 (best) BASIC

Gene PTPRD, Length 1,697 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-207ENST00000463477 RNF151Q2KHN1 245 aa6.99□□□□□ -1.29
PTPRD-207ENST00000463477 LITAFQ99732 161 aa6.99□□□□□ -1.29
PTPRD-207ENST00000463477 VPS25Q9BRG1 176 aa6.99□□□□□ -1.29
PTPRD-207ENST00000463477 GEMIN7Q9H840 131 aaKnown RBP6.99□□□□□ -1.29
PTPRD-207ENST00000463477 RETNQ9HD89 108 aa6.99□□□□□ -1.29
PTPRD-207ENST00000463477 IGHV3-38A0A0C4DH36 116 aa6.98□□□□□ -1.29
PTPRD-207ENST00000463477 HERVK_113P63121 156 aa6.98□□□□□ -1.29
PTPRD-207ENST00000463477 DGAT2L7PQ6IED9 249 aa6.98□□□□□ -1.29
PTPRD-207ENST00000463477 NDUFA12Q9UI09 145 aa6.98□□□□□ -1.29
PTPRD-207ENST00000463477 TRAV8-3A0A0A6YYJ7 113 aa6.97□□□□□ -1.29
PTPRD-207ENST00000463477 IGLV5-39A0A0G2JS06 123 aa6.97□□□□□ -1.29
PTPRD-207ENST00000463477 A4D1N5 150 aa6.97□□□□□ -1.29
PTPRD-207ENST00000463477 C3orf84H3BNL1 204 aa6.97□□□□□ -1.29
PTPRD-207ENST00000463477 ATP6V0E2Q8NHE4 81 aa6.97□□□□□ -1.29
PTPRD-207ENST00000463477 MUC7Q8TAX7 377 aa6.97□□□□□ -1.29
PTPRD-207ENST00000463477 NOP10Q9NPE3 64 aaKnown RBP6.97□□□□□ -1.29
PTPRD-207ENST00000463477 IGHV3-64A0A075B6Q5 118 aa6.96□□□□□ -1.29
PTPRD-207ENST00000463477 TEX48A0A1B0GUV7 120 aa6.96□□□□□ -1.29
PTPRD-207ENST00000463477 J3QR89 54 aa6.96□□□□□ -1.29
PTPRD-207ENST00000463477 NDUFA1O15239 70 aa6.96□□□□□ -1.29
PTPRD-207ENST00000463477 IGHV3-33P01772 117 aa6.96□□□□□ -1.29
PTPRD-207ENST00000463477 IFITM1P13164 125 aa6.96□□□□□ -1.29
PTPRD-207ENST00000463477 WFDC2Q14508 124 aa6.96□□□□□ -1.29
PTPRD-207ENST00000463477 DEFB135Q30KP9 77 aa6.96□□□□□ -1.29
PTPRD-207ENST00000463477 RNASE13Q5GAN3 156 aaKnown RBP6.96□□□□□ -1.29
PTPRD-207ENST00000463477 NTM-AS1Q6ZSK4 140 aa6.96□□□□□ -1.29
PTPRD-207ENST00000463477 MUSTN1Q8IVN3 82 aa6.96□□□□□ -1.29
PTPRD-207ENST00000463477 MIAQ16674 131 aa6.96□□□□□ -1.3
PTPRD-207ENST00000463477 LINC00242Q5T6M2 205 aa6.96□□□□□ -1.3
PTPRD-207ENST00000463477 PPDPFQ9H3Y8 114 aa6.96□□□□□ -1.3
PTPRD-207ENST00000463477 CDKN2A-AS1Q9UH64 79 aa6.96□□□□□ -1.3
PTPRD-207ENST00000463477 LOC107984156A0A0G2JMH3 177 aa6.95□□□□□ -1.3
PTPRD-207ENST00000463477 M0QXV9 152 aa6.95□□□□□ -1.3
PTPRD-207ENST00000463477 SPINK8P0C7L1 97 aa6.95□□□□□ -1.3
PTPRD-207ENST00000463477 LINC00694P0DN24 101 aa6.95□□□□□ -1.3
PTPRD-207ENST00000463477 ARL17AQ8IVW1 177 aa6.95□□□□□ -1.3
PTPRD-207ENST00000463477 LINC00612Q8N6U2 182 aa6.95□□□□□ -1.3
PTPRD-207ENST00000463477 TMEM101Q96IK0 257 aa6.95□□□□□ -1.3
PTPRD-207ENST00000463477 TMEM243Q9BU79 118 aa6.95□□□□□ -1.3
PTPRD-207ENST00000463477 CDC42SE2Q9NRR3 84 aa6.95□□□□□ -1.3
PTPRD-207ENST00000463477 TRGV2A0A075B6R0 118 aa6.94□□□□□ -1.3
PTPRD-207ENST00000463477 EIF4EBP3O60516 100 aaPredicted RBP6.94□□□□□ -1.3
PTPRD-207ENST00000463477 PCP4P48539 62 aa6.94□□□□□ -1.3
PTPRD-207ENST00000463477 ERG28Q9UKR5 140 aa6.94□□□□□ -1.3
PTPRD-207ENST00000463477 GAGE12JA6NER3 117 aa6.93□□□□□ -1.3
PTPRD-207ENST00000463477 GAGE7O76087 117 aa6.93□□□□□ -1.3
PTPRD-207ENST00000463477 GAGE12FP0CL80 117 aa6.93□□□□□ -1.3
PTPRD-207ENST00000463477 GAGE12GP0CL81 117 aa6.93□□□□□ -1.3
PTPRD-207ENST00000463477 GAGE12IP0CL82 117 aa6.93□□□□□ -1.3
PTPRD-207ENST00000463477 GAGE4Q13068 117 aa6.93□□□□□ -1.3
PTPRD-207ENST00000463477 GAGE5Q13069 117 aa6.93□□□□□ -1.3
PTPRD-207ENST00000463477 CASC10Q5T4H9 136 aa6.93□□□□□ -1.3
PTPRD-207ENST00000463477 LINC01600Q96MT4 127 aa6.93□□□□□ -1.3
PTPRD-207ENST00000463477 CSMD3Q7Z407 3707 aa6.93□□□□□ -1.3
PTPRD-207ENST00000463477 TRBV30A0A0K0K1B3 111 aa6.93□□□□□ -1.3
PTPRD-207ENST00000463477 SMIM9A6NGZ8 99 aa6.93□□□□□ -1.3
PTPRD-207ENST00000463477 TCL1BO95988 128 aa6.93□□□□□ -1.3
PTPRD-207ENST00000463477 PSMB2P49721 201 aa6.93□□□□□ -1.3
PTPRD-207ENST00000463477 COX6A2Q02221 97 aa6.93□□□□□ -1.3
PTPRD-207ENST00000463477 FHL2Q14192 279 aa6.93□□□□□ -1.3
PTPRD-207ENST00000463477 ETDBQ3ZM63 59 aa6.93□□□□□ -1.3
PTPRD-207ENST00000463477 TRGV4A0A0C4DH28 118 aa6.92□□□□□ -1.3
PTPRD-207ENST00000463477 A0A0J9YWU9 116 aa6.92□□□□□ -1.3
PTPRD-207ENST00000463477 SMIM1B2RUZ4 78 aa6.92□□□□□ -1.3
PTPRD-207ENST00000463477 UBE2L6O14933 153 aa6.92□□□□□ -1.3
PTPRD-207ENST00000463477 SMCPP49901 116 aaPredicted RBP6.92□□□□□ -1.3
PTPRD-207ENST00000463477 CIRBPQ14011 172 aaKnown RBP6.92□□□□□ -1.3
PTPRD-207ENST00000463477 ADAMTSL4-AS1Q5T5F5 129 aa6.92□□□□□ -1.3
PTPRD-207ENST00000463477 COPS9Q8WXC6 57 aa6.92□□□□□ -1.3
PTPRD-207ENST00000463477 F5H768 121 aa6.91□□□□□ -1.3
PTPRD-207ENST00000463477 HERV-K104P63124 156 aa6.91□□□□□ -1.3
PTPRD-207ENST00000463477 KMT2CQ8NEZ4 4911 aaKnown RBP6.91□□□□□ -1.3
PTPRD-207ENST00000463477 SH2D6Q7Z4S9 175 aa6.9□□□□□ -1.3
PTPRD-207ENST00000463477 TRBV6-8A0A0A6YYG3 113 aa6.9□□□□□ -1.31
PTPRD-207ENST00000463477 PRSS2P07478 247 aa6.9□□□□□ -1.31
PTPRD-207ENST00000463477 SCGB1C2P0DMR2 95 aa6.9□□□□□ -1.31
PTPRD-207ENST00000463477 MIFP14174 115 aa6.9□□□□□ -1.31
PTPRD-207ENST00000463477 TEN1Q86WV5 123 aa6.9□□□□□ -1.31
PTPRD-207ENST00000463477 ZNF625Q96I27 306 aaPredicted RBP6.9□□□□□ -1.31
PTPRD-207ENST00000463477 C11orf68Q9H3H3 251 aaKnown RBP6.9□□□□□ -1.31
PTPRD-207ENST00000463477 X6R8D5 127 aa6.9□□□□□ -1.31
PTPRD-207ENST00000463477 FOXI1Q12951 378 aa6.89□□□□□ -1.31
PTPRD-207ENST00000463477 Q8NAQ8 132 aa6.89□□□□□ -1.31
PTPRD-207ENST00000463477 TENM2Q9NT68 2774 aa6.88□□□□□ -1.31
PTPRD-207ENST00000463477 TRAV13-1A0A0B4J241 112 aa6.88□□□□□ -1.31
PTPRD-207ENST00000463477 LOC100131303A0A0U1RQF7 123 aa6.88□□□□□ -1.31
PTPRD-207ENST00000463477 ATXN8Q156A1 80 aa6.88□□□□□ -1.31
PTPRD-207ENST00000463477 SFTA2Q6UW10 78 aa6.88□□□□□ -1.31
PTPRD-207ENST00000463477 PPDPFLQ8WWR9 84 aa6.88□□□□□ -1.31
PTPRD-207ENST00000463477 Q9H8V8 135 aa6.88□□□□□ -1.31
PTPRD-207ENST00000463477 STARD9Q9P2P6 4700 aa6.88□□□□□ -1.31
PTPRD-207ENST00000463477 LYRM9A8MSI8 78 aa6.87□□□□□ -1.31
PTPRD-207ENST00000463477 MTURNQ8N3F0 131 aa6.87□□□□□ -1.31
PTPRD-207ENST00000463477 LINC00308Q8TCZ7 52 aa6.87□□□□□ -1.31
PTPRD-207ENST00000463477 ICOSQ9Y6W8 199 aa6.87□□□□□ -1.31
PTPRD-207ENST00000463477 IGHV4-28A0A0C4DH34 117 aa6.87□□□□□ -1.31
PTPRD-207ENST00000463477 GAGE12HA6NDE8 117 aa6.87□□□□□ -1.31
PTPRD-207ENST00000463477 COX6CP09669 75 aa6.87□□□□□ -1.31
PTPRD-207ENST00000463477 Q1RN00 199 aa6.87□□□□□ -1.31
PTPRD-207ENST00000463477 A0A1B0GUV1 79 aa6.86□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 93.5 ms