RNA–Protein interactions for RNA: ENST00000463048.3

NUP43-205, Transcript of nucleoporin 43, humanhuman

TSL 3

Gene NUP43, Length 523 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP43-205ENST00000463048 NPSP0C0P6 89 aa13.23□□□□□ -0.29
NUP43-205ENST00000463048 LINC00242Q5T6M2 205 aa13.23□□□□□ -0.29
NUP43-205ENST00000463048 CDPF1Q6NVV7 123 aa13.23□□□□□ -0.29
NUP43-205ENST00000463048 LINC00526Q96FQ7 95 aa13.23□□□□□ -0.29
NUP43-205ENST00000463048 DYNC1H1Q14204 4646 aaKnown RBP13.22□□□□□ -0.29
NUP43-205ENST00000463048 GCSHP23434 173 aa13.22□□□□□ -0.29
NUP43-205ENST00000463048 LINC00310P59036 64 aa13.22□□□□□ -0.29
NUP43-205ENST00000463048 PDZD11Q5EBL8 140 aa13.22□□□□□ -0.29
NUP43-205ENST00000463048 NUPR1O60356 82 aa13.21□□□□□ -0.29
NUP43-205ENST00000463048 HIST1H2BKO60814 126 aa13.21□□□□□ -0.29
NUP43-205ENST00000463048 HIST1H2BJP06899 126 aa13.21□□□□□ -0.29
NUP43-205ENST00000463048 HIST1H2BOP23527 126 aa13.21□□□□□ -0.29
NUP43-205ENST00000463048 HIST1H2BBP33778 126 aa13.21□□□□□ -0.29
NUP43-205ENST00000463048 HIST1H2BDP58876 126 aa13.21□□□□□ -0.29
NUP43-205ENST00000463048 KRTAP10-1P60331 282 aa13.21□□□□□ -0.29
NUP43-205ENST00000463048 HIST1H2BCP62807 126 aa13.21□□□□□ -0.29
NUP43-205ENST00000463048 HIST2H2BEQ16778 126 aa13.21□□□□□ -0.29
NUP43-205ENST00000463048 HIST2H2BFQ5QNW6 126 aaPredicted RBP13.21□□□□□ -0.29
NUP43-205ENST00000463048 HIST1H2BHQ93079 126 aa13.21□□□□□ -0.29
NUP43-205ENST00000463048 HIST1H2BNQ99877 126 aa13.21□□□□□ -0.29
NUP43-205ENST00000463048 HIST1H2BMQ99879 126 aa13.21□□□□□ -0.29
NUP43-205ENST00000463048 DNAH5Q8TE73 4624 aa13.2□□□□□ -0.3
NUP43-205ENST00000463048 IGHV1-58A0A0C4DH39 117 aa13.2□□□□□ -0.3
NUP43-205ENST00000463048 A0A0J9YXV3 536 aa13.2□□□□□ -0.3
NUP43-205ENST00000463048 CST9LQ9H4G1 147 aa13.2□□□□□ -0.3
NUP43-205ENST00000463048 IGHV3OR16-9A0A0B4J2B5 98 aa13.19□□□□□ -0.3
NUP43-205ENST00000463048 PMVKQ15126 192 aa13.19□□□□□ -0.3
NUP43-205ENST00000463048 GVQW2A0A096LPI5 108 aaPredicted RBP13.17□□□□□ -0.3
NUP43-205ENST00000463048 ATP5LO75964 103 aa13.17□□□□□ -0.3
NUP43-205ENST00000463048 SLPIP03973 132 aa13.17□□□□□ -0.3
NUP43-205ENST00000463048 GEMIN7Q9H840 131 aaKnown RBP13.17□□□□□ -0.3
NUP43-205ENST00000463048 BIRC6Q9NR09 4857 aa13.17□□□□□ -0.3
NUP43-205ENST00000463048 ZNF561-AS1K7EIQ3 104 aa13.16□□□□□ -0.3
NUP43-205ENST00000463048 ORAOV1Q8WV07 137 aa13.16□□□□□ -0.3
NUP43-205ENST00000463048 APOMO95445 188 aa13.15□□□□□ -0.3
NUP43-205ENST00000463048 FABP4P15090 132 aa13.14□□□□□ -0.31
NUP43-205ENST00000463048 IFI27L1Q96BM0 104 aa13.14□□□□□ -0.31
NUP43-205ENST00000463048 IGLV4-69A0A075B6H9 119 aa13.13□□□□□ -0.31
NUP43-205ENST00000463048 A0A087WZ39 114 aa13.13□□□□□ -0.31
NUP43-205ENST00000463048 H0Y8G0 127 aa13.13□□□□□ -0.31
NUP43-205ENST00000463048 HERVK_113P63121 156 aa13.13□□□□□ -0.31
NUP43-205ENST00000463048 SPAG11BQ08648 103 aa13.13□□□□□ -0.31
NUP43-205ENST00000463048 LINC00469Q8N7U9 141 aa13.13□□□□□ -0.31
NUP43-205ENST00000463048 CDKN2A-AS1Q9UH64 79 aa13.13□□□□□ -0.31
NUP43-205ENST00000463048 IGHV3-64A0A075B6Q5 118 aa13.12□□□□□ -0.31
NUP43-205ENST00000463048 SEC11AP67812 179 aa13.12□□□□□ -0.31
NUP43-205ENST00000463048 HAMPP81172 84 aa13.12□□□□□ -0.31
NUP43-205ENST00000463048 FAM19A3Q7Z5A8 133 aa13.12□□□□□ -0.31
NUP43-205ENST00000463048 LRP1BQ9NZR2 4599 aa13.12□□□□□ -0.31
NUP43-205ENST00000463048 TRAV16A0A0A6YYK6 109 aaPredicted RBP13.11□□□□□ -0.31
NUP43-205ENST00000463048 TINCRA0A1B0GVN0 87 aa13.11□□□□□ -0.31
NUP43-205ENST00000463048 LEPROTL1O95214 131 aa13.11□□□□□ -0.31
NUP43-205ENST00000463048 CNBPP62633 177 aaKnown RBP13.11□□□□□ -0.31
NUP43-205ENST00000463048 C9orf163Q8N9P6 203 aa13.1□□□□□ -0.31
NUP43-205ENST00000463048 CHAC1Q9BUX1 264 aa13.1□□□□□ -0.31
NUP43-205ENST00000463048 OR10D4PQ8NGN7 298 aa13.09□□□□□ -0.31
NUP43-205ENST00000463048 PACRGQ96M98 296 aaPredicted RBP13.09□□□□□ -0.31
NUP43-205ENST00000463048 CAMK2N2Q96S95 79 aa13.09□□□□□ -0.31
NUP43-205ENST00000463048 FAM30AQ9NZY2 134 aa13.09□□□□□ -0.31
NUP43-205ENST00000463048 TOMM7Q9P0U1 55 aa13.09□□□□□ -0.31
NUP43-205ENST00000463048 SYCNQ0VAF6 134 aa13.08□□□□□ -0.32
NUP43-205ENST00000463048 CARD19Q96LW7 228 aa13.08□□□□□ -0.32
NUP43-205ENST00000463048 CHTOPQ9Y3Y2 248 aaKnown RBP13.08□□□□□ -0.32
NUP43-205ENST00000463048 SPINK8P0C7L1 97 aa13.07□□□□□ -0.32
NUP43-205ENST00000463048 Q6ZRU5 148 aa13.07□□□□□ -0.32
NUP43-205ENST00000463048 IGLC3P0DOY3 106 aa13.06□□□□□ -0.32
NUP43-205ENST00000463048 HSPB8Q9UJY1 196 aa13.06□□□□□ -0.32
NUP43-205ENST00000463048 C11orf86A6NJI1 115 aa13.05□□□□□ -0.32
NUP43-205ENST00000463048 PRSS2P07478 247 aa13.04□□□□□ -0.32
NUP43-205ENST00000463048 C2orf82Q6UX34 121 aa13.04□□□□□ -0.32
NUP43-205ENST00000463048 LINC01561Q8N1V8 128 aa13.04□□□□□ -0.32
NUP43-205ENST00000463048 MRPL35Q9NZE8 188 aaKnown RBP13.04□□□□□ -0.32
NUP43-205ENST00000463048 IGLV5-45A0A087WSX0 123 aa13.03□□□□□ -0.32
NUP43-205ENST00000463048 TRAV12-1A0A0B4J245 112 aa13.03□□□□□ -0.32
NUP43-205ENST00000463048 ZNF22P17026 224 aaPredicted RBP13.03□□□□□ -0.32
NUP43-205ENST00000463048 KIAA0087Q14695 138 aa13.03□□□□□ -0.32
NUP43-205ENST00000463048 TMEM170BQ5T4T1 132 aa13.03□□□□□ -0.32
NUP43-205ENST00000463048 SDIM1Q6ZPB5 146 aa13.03□□□□□ -0.32
NUP43-205ENST00000463048 C2orf48Q96LS8 159 aa13.03□□□□□ -0.32
NUP43-205ENST00000463048 SMIM1B2RUZ4 78 aa13.02□□□□□ -0.33
NUP43-205ENST00000463048 H3BRM9 83 aa13.02□□□□□ -0.33
NUP43-205ENST00000463048 CHTF8P0CG12 524 aa13.02□□□□□ -0.33
NUP43-205ENST00000463048 C10orf25Q5T742 122 aa13.02□□□□□ -0.33
NUP43-205ENST00000463048 UNQ6190/PRO20217Q6UXQ8 127 aa13.02□□□□□ -0.33
NUP43-205ENST00000463048 NDUFA1O15239 70 aa13.01□□□□□ -0.33
NUP43-205ENST00000463048 CDK2AP2O75956 126 aa13.01□□□□□ -0.33
NUP43-205ENST00000463048 XGP55808 180 aa13.01□□□□□ -0.33
NUP43-205ENST00000463048 C6orf226Q5I0X4 101 aa13.01□□□□□ -0.33
NUP43-205ENST00000463048 PMCHL2Q9BQD1 86 aa13.01□□□□□ -0.33
NUP43-205ENST00000463048 APOBP04114 4563 aaKnown RBP13□□□□□ -0.33
NUP43-205ENST00000463048 IGKV2-24A0A0C4DH68 120 aa13□□□□□ -0.33
NUP43-205ENST00000463048 PANO1I0J062 215 aa13□□□□□ -0.33
NUP43-205ENST00000463048 ODF1Q14990 250 aa13□□□□□ -0.33
NUP43-205ENST00000463048 COA6Q5JTJ3 125 aaKnown RBP13□□□□□ -0.33
NUP43-205ENST00000463048 MAP1LC3CQ9BXW4 147 aa13□□□□□ -0.33
NUP43-205ENST00000463048 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP13□□□□□ -0.33
NUP43-205ENST00000463048 KIAA1109Q2LD37 5005 aa12.99□□□□□ -0.33
NUP43-205ENST00000463048 F8VRH5 84 aa12.99□□□□□ -0.33
NUP43-205ENST00000463048 CKS1BP61024 79 aa12.99□□□□□ -0.33
NUP43-205ENST00000463048 DPH3Q96FX2 82 aa12.99□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 61.7 ms