RNA–Protein interactions for RNA: ENST00000462306.5

ERCC3-206, Transcript of ERCC excision repair 3, TFIIH core complex helicase subunit, humanhuman

TSL 1 (best)

Gene ERCC3, Length 963 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3-206ENST00000462306 MALP21145 153 aa10.16□□□□□ -0.78
ERCC3-206ENST00000462306 Q5VSD8 79 aa10.16□□□□□ -0.78
ERCC3-206ENST00000462306 TRAPPC1Q9Y5R8 145 aa10.16□□□□□ -0.78
ERCC3-206ENST00000462306 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP10.16□□□□□ -0.78
ERCC3-206ENST00000462306 NPSP0C0P6 89 aa10.15□□□□□ -0.78
ERCC3-206ENST00000462306 G0S2P27469 103 aa10.15□□□□□ -0.78
ERCC3-206ENST00000462306 LINC00173Q6ZV60 143 aa10.15□□□□□ -0.78
ERCC3-206ENST00000462306 TOMM6Q96B49 74 aa10.15□□□□□ -0.78
ERCC3-206ENST00000462306 AMELXQ99217 191 aa10.15□□□□□ -0.78
ERCC3-206ENST00000462306 CIRBPQ14011 172 aaKnown RBP10.14□□□□□ -0.79
ERCC3-206ENST00000462306 LINC00242Q5T6M2 205 aa10.14□□□□□ -0.79
ERCC3-206ENST00000462306 ZC2HC1BQ5TFG8 222 aa10.14□□□□□ -0.79
ERCC3-206ENST00000462306 TEX43Q6ZNM6 134 aa10.14□□□□□ -0.79
ERCC3-206ENST00000462306 ZNF561-AS1K7EIQ3 104 aa10.13□□□□□ -0.79
ERCC3-206ENST00000462306 UBE2D1P51668 147 aa10.13□□□□□ -0.79
ERCC3-206ENST00000462306 TIMM17AQ99595 171 aa10.13□□□□□ -0.79
ERCC3-206ENST00000462306 VCX2Q9H322 139 aa10.13□□□□□ -0.79
ERCC3-206ENST00000462306 IGLV4-69A0A075B6H9 119 aa10.12□□□□□ -0.79
ERCC3-206ENST00000462306 FAM229AH3BQW9 127 aa10.12□□□□□ -0.79
ERCC3-206ENST00000462306 COX6A2Q02221 97 aa10.12□□□□□ -0.79
ERCC3-206ENST00000462306 Q6ZN92 141 aa10.12□□□□□ -0.79
ERCC3-206ENST00000462306 CBLN2Q8IUK8 224 aa10.12□□□□□ -0.79
ERCC3-206ENST00000462306 C18orf32Q8TCD1 76 aa10.12□□□□□ -0.79
ERCC3-206ENST00000462306 VPS13BQ7Z7G8 4022 aa10.11□□□□□ -0.79
ERCC3-206ENST00000462306 APOMO95445 188 aa10.11□□□□□ -0.79
ERCC3-206ENST00000462306 CHTF8P0CG12 524 aa10.11□□□□□ -0.79
ERCC3-206ENST00000462306 SYCNQ0VAF6 134 aa10.11□□□□□ -0.79
ERCC3-206ENST00000462306 FA2HQ7L5A8 372 aa10.11□□□□□ -0.79
ERCC3-206ENST00000462306 ERASQ7Z444 233 aa10.11□□□□□ -0.79
ERCC3-206ENST00000462306 LINC00528Q8N1L1 170 aa10.11□□□□□ -0.79
ERCC3-206ENST00000462306 URB1-AS1Q96HZ7 61 aa10.11□□□□□ -0.79
ERCC3-206ENST00000462306 CARD19Q96LW7 228 aa10.11□□□□□ -0.79
ERCC3-206ENST00000462306 C2orf88Q9BSF0 95 aa10.11□□□□□ -0.79
ERCC3-206ENST00000462306 A0A087WZ39 114 aa10.1□□□□□ -0.79
ERCC3-206ENST00000462306 FAM19A3Q7Z5A8 133 aa10.1□□□□□ -0.79
ERCC3-206ENST00000462306 OR10D4PQ8NGN7 298 aa10.1□□□□□ -0.79
ERCC3-206ENST00000462306 SCGB3A1Q96QR1 104 aa10.1□□□□□ -0.79
ERCC3-206ENST00000462306 SMCO4Q9NRQ5 59 aa10.1□□□□□ -0.79
ERCC3-206ENST00000462306 LINC01549A6NIU2 74 aa10.09□□□□□ -0.79
ERCC3-206ENST00000462306 SPAG11BQ08648 103 aa10.09□□□□□ -0.79
ERCC3-206ENST00000462306 PAPPA-AS1Q5QFB9 102 aa10.09□□□□□ -0.79
ERCC3-206ENST00000462306 SPACA4Q8TDM5 124 aa10.09□□□□□ -0.79
ERCC3-206ENST00000462306 C2orf48Q96LS8 159 aa10.09□□□□□ -0.79
ERCC3-206ENST00000462306 Q6ZRU5 148 aa10.08□□□□□ -0.8
ERCC3-206ENST00000462306 ORAOV1Q8WV07 137 aa10.08□□□□□ -0.8
ERCC3-206ENST00000462306 SRRM2Q9UQ35 2752 aaKnown RBP10.08□□□□□ -0.8
ERCC3-206ENST00000462306 A0A096LNJ9 63 aa10.07□□□□□ -0.8
ERCC3-206ENST00000462306 LINC00614P0C842 121 aa10.07□□□□□ -0.8
ERCC3-206ENST00000462306 CAMK2N2Q96S95 79 aa10.07□□□□□ -0.8
ERCC3-206ENST00000462306 A0A087WYN8 130 aa10.06□□□□□ -0.8
ERCC3-206ENST00000462306 A0A096LNI7 61 aa10.06□□□□□ -0.8
ERCC3-206ENST00000462306 IGKV2-24A0A0C4DH68 120 aa10.05□□□□□ -0.8
ERCC3-206ENST00000462306 PLA2G1BP04054 148 aaKnown RBP10.05□□□□□ -0.8
ERCC3-206ENST00000462306 INAFM2P0DMQ5 153 aa10.05□□□□□ -0.8
ERCC3-206ENST00000462306 KRTAP10-4P60372 401 aaPredicted RBP10.05□□□□□ -0.8
ERCC3-206ENST00000462306 KIAA0087Q14695 138 aa10.05□□□□□ -0.8
ERCC3-206ENST00000462306 LINC01561Q8N1V8 128 aa10.05□□□□□ -0.8
ERCC3-206ENST00000462306 DPH3Q96FX2 82 aa10.05□□□□□ -0.8
ERCC3-206ENST00000462306 F8WDY8 70 aa10.04□□□□□ -0.8
ERCC3-206ENST00000462306 MAJINQ3KP22 176 aa10.04□□□□□ -0.8
ERCC3-206ENST00000462306 PLAC8Q9NZF1 115 aa10.04□□□□□ -0.8
ERCC3-206ENST00000462306 PKIGQ9Y2B9 76 aa10.04□□□□□ -0.8
ERCC3-206ENST00000462306 A0A0J9YXV3 536 aa10.03□□□□□ -0.8
ERCC3-206ENST00000462306 RAB5BP61020 215 aa10.03□□□□□ -0.8
ERCC3-206ENST00000462306 HERVK_113P63121 156 aa10.03□□□□□ -0.8
ERCC3-206ENST00000462306 SEC11AP67812 179 aa10.03□□□□□ -0.8
ERCC3-206ENST00000462306 RNF151Q2KHN1 245 aa10.03□□□□□ -0.8
ERCC3-206ENST00000462306 CST9LQ9H4G1 147 aa10.03□□□□□ -0.8
ERCC3-206ENST00000462306 LOC107984640A0A0U1RRK4 108 aa10.02□□□□□ -0.81
ERCC3-206ENST00000462306 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP10.02□□□□□ -0.81
ERCC3-206ENST00000462306 PMCHL1Q16048 86 aa10.02□□□□□ -0.81
ERCC3-206ENST00000462306 C10orf25Q5T742 122 aa10.02□□□□□ -0.81
ERCC3-206ENST00000462306 MRPL35Q9NZE8 188 aaKnown RBP10.02□□□□□ -0.81
ERCC3-206ENST00000462306 CDKN2A-AS1Q9UH64 79 aa10.02□□□□□ -0.81
ERCC3-206ENST00000462306 NDUFA1O15239 70 aa10.01□□□□□ -0.81
ERCC3-206ENST00000462306 HBDP02042 147 aa10.01□□□□□ -0.81
ERCC3-206ENST00000462306 PMVKQ15126 192 aa10.01□□□□□ -0.81
ERCC3-206ENST00000462306 PDZD11Q5EBL8 140 aa10.01□□□□□ -0.81
ERCC3-206ENST00000462306 UNQ6190/PRO20217Q6UXQ8 127 aa10.01□□□□□ -0.81
ERCC3-206ENST00000462306 GEMIN7Q9H840 131 aaKnown RBP10.01□□□□□ -0.81
ERCC3-206ENST00000462306 LINC00474Q9P2X8 69 aa10.01□□□□□ -0.81
ERCC3-206ENST00000462306 TINCRA0A1B0GVN0 87 aa10□□□□□ -0.81
ERCC3-206ENST00000462306 TRGC2P03986 189 aa10□□□□□ -0.81
ERCC3-206ENST00000462306 PTTG1IPP53801 180 aa10□□□□□ -0.81
ERCC3-206ENST00000462306 STPG4Q8N801 248 aa10□□□□□ -0.81
ERCC3-206ENST00000462306 IGLV5-45A0A087WSX0 123 aa9.99□□□□□ -0.81
ERCC3-206ENST00000462306 COLCA2A8K830 154 aa9.99□□□□□ -0.81
ERCC3-206ENST00000462306 GAGE2BQ13066 116 aa9.99□□□□□ -0.81
ERCC3-206ENST00000462306 C6orf48Q9UBA6 75 aa9.99□□□□□ -0.81
ERCC3-206ENST00000462306 RPL37AP61513 92 aaKnown RBP9.98□□□□□ -0.81
ERCC3-206ENST00000462306 C2orf82Q6UX34 121 aa9.98□□□□□ -0.81
ERCC3-206ENST00000462306 LINC00469Q8N7U9 141 aa9.98□□□□□ -0.81
ERCC3-206ENST00000462306 CHCHD1Q96BP2 118 aaKnown RBP9.98□□□□□ -0.81
ERCC3-206ENST00000462306 FLG2Q5D862 2391 aaPredicted RBP9.97□□□□□ -0.81
ERCC3-206ENST00000462306 Q8IZM0 81 aa9.97□□□□□ -0.81
ERCC3-206ENST00000462306 SMIM1B2RUZ4 78 aa9.96□□□□□ -0.82
ERCC3-206ENST00000462306 ATP5LO75964 103 aa9.96□□□□□ -0.82
ERCC3-206ENST00000462306 TLX1NBP0CAT3 122 aa9.96□□□□□ -0.82
ERCC3-206ENST00000462306 RPL18AQ02543 176 aaKnown RBP9.96□□□□□ -0.82
ERCC3-206ENST00000462306 PACRGQ96M98 296 aaPredicted RBP9.96□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 58.9 ms