RNA–Protein interactions for RNA: ENST00000462258.1

SF3A3-204, Transcript of splicing factor 3a subunit 3, humanhuman

TSL 2

Gene SF3A3, Length 527 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A3-204ENST00000462258 RAB5AP20339 215 aa6.42□□□□□ -1.38
SF3A3-204ENST00000462258 IFI27P40305 119 aaPredicted RBP6.42□□□□□ -1.38
SF3A3-204ENST00000462258 MRPS36P82909 103 aaKnown RBP6.42□□□□□ -1.38
SF3A3-204ENST00000462258 SPAG11BQ08648 103 aa6.42□□□□□ -1.38
SF3A3-204ENST00000462258 C5orf38Q86SI9 138 aa6.42□□□□□ -1.38
SF3A3-204ENST00000462258 FAM104AQ969W3 186 aa6.42□□□□□ -1.38
SF3A3-204ENST00000462258 CAMK2N2Q96S95 79 aa6.42□□□□□ -1.38
SF3A3-204ENST00000462258 OPRPNQ99935 248 aaPredicted RBP6.42□□□□□ -1.38
SF3A3-204ENST00000462258 MAP1LC3AQ9H492 121 aa6.42□□□□□ -1.38
SF3A3-204ENST00000462258 LINC00474Q9P2X8 69 aa6.42□□□□□ -1.38
SF3A3-204ENST00000462258 UQCC3Q6UW78 93 aa6.41□□□□□ -1.38
SF3A3-204ENST00000462258 Q6ZRU5 148 aa6.41□□□□□ -1.38
SF3A3-204ENST00000462258 IGLV4-3A0A075B6K6 122 aa6.4□□□□□ -1.38
SF3A3-204ENST00000462258 LOC389332A0A1B0GUA5 103 aa6.4□□□□□ -1.38
SF3A3-204ENST00000462258 IFITM2Q01629 132 aa6.4□□□□□ -1.38
SF3A3-204ENST00000462258 OR10D4PQ8NGN7 298 aa6.4□□□□□ -1.38
SF3A3-204ENST00000462258 C2orf48Q96LS8 159 aa6.4□□□□□ -1.38
SF3A3-204ENST00000462258 IGHV3OR16-9A0A0B4J2B5 98 aa6.39□□□□□ -1.39
SF3A3-204ENST00000462258 LOC107984640A0A0U1RRK4 108 aa6.39□□□□□ -1.39
SF3A3-204ENST00000462258 PRSS47A8MTI9 375 aa6.39□□□□□ -1.39
SF3A3-204ENST00000462258 PTTG1IPP53801 180 aa6.39□□□□□ -1.39
SF3A3-204ENST00000462258 PRR3P79522 188 aaKnown RBP6.39□□□□□ -1.39
SF3A3-204ENST00000462258 Q8N8P6 123 aa6.39□□□□□ -1.39
SF3A3-204ENST00000462258 ORAOV1Q8WV07 137 aa6.39□□□□□ -1.39
SF3A3-204ENST00000462258 IMMP2LQ96T52 175 aa6.39□□□□□ -1.39
SF3A3-204ENST00000462258 PYGO1Q9Y3Y4 419 aa6.39□□□□□ -1.39
SF3A3-204ENST00000462258 TGIF2-C20orf24A0A0A6YYL0 155 aa6.38□□□□□ -1.39
SF3A3-204ENST00000462258 TMEM218A2RU14 115 aa6.38□□□□□ -1.39
SF3A3-204ENST00000462258 RPL18AQ02543 176 aaKnown RBP6.38□□□□□ -1.39
SF3A3-204ENST00000462258 GAGE2BQ13066 116 aa6.38□□□□□ -1.39
SF3A3-204ENST00000462258 ORMDL2Q53FV1 153 aa6.38□□□□□ -1.39
SF3A3-204ENST00000462258 TMEM141Q96I45 108 aa6.38□□□□□ -1.39
SF3A3-204ENST00000462258 CTDSP1Q9GZU7 261 aa6.38□□□□□ -1.39
SF3A3-204ENST00000462258 CYSLTR1Q9Y271 337 aa6.38□□□□□ -1.39
SF3A3-204ENST00000462258 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP6.37□□□□□ -1.39
SF3A3-204ENST00000462258 LCE2CQ5TA81 110 aa6.37□□□□□ -1.39
SF3A3-204ENST00000462258 C2orf66Q6UXQ4 117 aa6.37□□□□□ -1.39
SF3A3-204ENST00000462258 TEX43Q6ZNM6 134 aa6.37□□□□□ -1.39
SF3A3-204ENST00000462258 C2orf88Q9BSF0 95 aa6.37□□□□□ -1.39
SF3A3-204ENST00000462258 TRAV9-1A0A075B6T8 112 aa6.36□□□□□ -1.39
SF3A3-204ENST00000462258 K7EMI3 77 aa6.36□□□□□ -1.39
SF3A3-204ENST00000462258 NDUFA1O15239 70 aa6.36□□□□□ -1.39
SF3A3-204ENST00000462258 LINC00242Q5T6M2 205 aa6.36□□□□□ -1.39
SF3A3-204ENST00000462258 Q6ZN92 141 aa6.36□□□□□ -1.39
SF3A3-204ENST00000462258 COMMD7Q86VX2 200 aa6.36□□□□□ -1.39
SF3A3-204ENST00000462258 SEC11CQ9BY50 192 aa6.36□□□□□ -1.39
SF3A3-204ENST00000462258 NXT2Q9NPJ8 142 aaKnown RBP6.36□□□□□ -1.39
SF3A3-204ENST00000462258 MRPL35Q9NZE8 188 aaKnown RBP6.36□□□□□ -1.39
SF3A3-204ENST00000462258 TNXBP22105 4242 aa6.35□□□□□ -1.39
SF3A3-204ENST00000462258 A0A087WZ39 114 aa6.35□□□□□ -1.39
SF3A3-204ENST00000462258 A0A0J9YXV3 536 aa6.35□□□□□ -1.39
SF3A3-204ENST00000462258 F8WDY8 70 aa6.35□□□□□ -1.39
SF3A3-204ENST00000462258 S100PP25815 95 aa6.35□□□□□ -1.39
SF3A3-204ENST00000462258 UBE2D1P51668 147 aa6.35□□□□□ -1.39
SF3A3-204ENST00000462258 RNF151Q2KHN1 245 aa6.35□□□□□ -1.39
SF3A3-204ENST00000462258 LCE2AQ5TA79 106 aaPredicted RBP6.35□□□□□ -1.39
SF3A3-204ENST00000462258 LINC00173Q6ZV60 143 aa6.35□□□□□ -1.39
SF3A3-204ENST00000462258 NPSP0C0P6 89 aa6.34□□□□□ -1.39
SF3A3-204ENST00000462258 KIAA1644Q3SXP7 199 aa6.34□□□□□ -1.39
SF3A3-204ENST00000462258 ZC2HC1BQ5TFG8 222 aa6.34□□□□□ -1.39
SF3A3-204ENST00000462258 A0A1W2PNN7 141 aa6.33□□□□□ -1.4
SF3A3-204ENST00000462258 C9orf116Q5BN46 136 aaPredicted RBP6.33□□□□□ -1.4
SF3A3-204ENST00000462258 C10orf25Q5T742 122 aa6.33□□□□□ -1.4
SF3A3-204ENST00000462258 Q6ZRP5 223 aa6.33□□□□□ -1.4
SF3A3-204ENST00000462258 AMELXQ99217 191 aa6.33□□□□□ -1.4
SF3A3-204ENST00000462258 VCX2Q9H322 139 aa6.33□□□□□ -1.4
SF3A3-204ENST00000462258 C6orf48Q9UBA6 75 aa6.33□□□□□ -1.4
SF3A3-204ENST00000462258 IGIPA6NJ69 53 aa6.32□□□□□ -1.4
SF3A3-204ENST00000462258 TLX1NBP0CAT3 122 aa6.32□□□□□ -1.4
SF3A3-204ENST00000462258 MT1HL1P0DM35 61 aa6.32□□□□□ -1.4
SF3A3-204ENST00000462258 KIAA0087Q14695 138 aa6.32□□□□□ -1.4
SF3A3-204ENST00000462258 SERTAD4-AS1Q5TG53 156 aa6.32□□□□□ -1.4
SF3A3-204ENST00000462258 UNQ6190/PRO20217Q6UXQ8 127 aa6.32□□□□□ -1.4
SF3A3-204ENST00000462258 TIMM17AQ99595 171 aa6.32□□□□□ -1.4
SF3A3-204ENST00000462258 G0S2P27469 103 aa6.31□□□□□ -1.4
SF3A3-204ENST00000462258 RHEBQ15382 184 aa6.31□□□□□ -1.4
SF3A3-204ENST00000462258 PAPPA-AS1Q5QFB9 102 aa6.31□□□□□ -1.4
SF3A3-204ENST00000462258 LINC01561Q8N1V8 128 aa6.31□□□□□ -1.4
SF3A3-204ENST00000462258 TOMM6Q96B49 74 aa6.31□□□□□ -1.4
SF3A3-204ENST00000462258 GNB1LQ9BYB4 327 aa6.31□□□□□ -1.4
SF3A3-204ENST00000462258 CARHSP1Q9Y2V2 147 aaKnown RBP6.31□□□□□ -1.4
SF3A3-204ENST00000462258 TRBV30A0A0K0K1B3 111 aa6.3□□□□□ -1.4
SF3A3-204ENST00000462258 MT-ND6P03923 174 aa6.3□□□□□ -1.4
SF3A3-204ENST00000462258 HERVK_113P63121 156 aa6.3□□□□□ -1.4
SF3A3-204ENST00000462258 COX19Q49B96 90 aa6.3□□□□□ -1.4
SF3A3-204ENST00000462258 C10orf91Q5T1B1 145 aa6.3□□□□□ -1.4
SF3A3-204ENST00000462258 C2orf82Q6UX34 121 aa6.3□□□□□ -1.4
SF3A3-204ENST00000462258 PHF5AQ7RTV0 110 aaKnown RBP6.3□□□□□ -1.4
SF3A3-204ENST00000462258 FAM19A3Q7Z5A8 133 aa6.3□□□□□ -1.4
SF3A3-204ENST00000462258 PACRGQ96M98 296 aaPredicted RBP6.3□□□□□ -1.4
SF3A3-204ENST00000462258 FAM168BA1KXE4 195 aa6.29□□□□□ -1.4
SF3A3-204ENST00000462258 PRSS2P07478 247 aa6.29□□□□□ -1.4
SF3A3-204ENST00000462258 SEC11AP67812 179 aa6.29□□□□□ -1.4
SF3A3-204ENST00000462258 GAGE2EQ4V326 116 aa6.29□□□□□ -1.4
SF3A3-204ENST00000462258 SPINK6Q6UWN8 80 aa6.29□□□□□ -1.4
SF3A3-204ENST00000462258 FAM19A5Q7Z5A7 132 aaPredicted RBP6.29□□□□□ -1.4
SF3A3-204ENST00000462258 ALKBH7Q9BT30 221 aaPredicted RBP6.29□□□□□ -1.4
SF3A3-204ENST00000462258 MRPL18Q9H0U6 180 aaKnown RBP6.29□□□□□ -1.4
SF3A3-204ENST00000462258 RPS10P5Q9NQ39 176 aa6.29□□□□□ -1.4
SF3A3-204ENST00000462258 TOMM7Q9P0U1 55 aa6.29□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 66.7 ms