RNA–Protein interactions for RNA: ENST00000460211.5

ATG4B-213, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 2

Gene ATG4B, Length 871 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-213ENST00000460211 OPRPNQ99935 248 aaPredicted RBP9.61□□□□□ -0.87
ATG4B-213ENST00000460211 PKIGQ9Y2B9 76 aa9.61□□□□□ -0.87
ATG4B-213ENST00000460211 C5orf38Q86SI9 138 aa9.6□□□□□ -0.87
ATG4B-213ENST00000460211 LINC00528Q8N1L1 170 aa9.6□□□□□ -0.87
ATG4B-213ENST00000460211 TMEM141Q96I45 108 aa9.6□□□□□ -0.87
ATG4B-213ENST00000460211 DNAH8Q96JB1 4490 aa9.59□□□□□ -0.87
ATG4B-213ENST00000460211 NPSP0C0P6 89 aa9.59□□□□□ -0.87
ATG4B-213ENST00000460211 FABP9Q0Z7S8 132 aa9.59□□□□□ -0.87
ATG4B-213ENST00000460211 TEX43Q6ZNM6 134 aa9.59□□□□□ -0.87
ATG4B-213ENST00000460211 C2orf88Q9BSF0 95 aa9.59□□□□□ -0.87
ATG4B-213ENST00000460211 MRPL18Q9H0U6 180 aaKnown RBP9.59□□□□□ -0.87
ATG4B-213ENST00000460211 IGLV4-3A0A075B6K6 122 aa9.58□□□□□ -0.88
ATG4B-213ENST00000460211 SYCNQ0VAF6 134 aa9.58□□□□□ -0.88
ATG4B-213ENST00000460211 PAPPA-AS1Q5QFB9 102 aa9.58□□□□□ -0.88
ATG4B-213ENST00000460211 FAM104AQ969W3 186 aa9.58□□□□□ -0.88
ATG4B-213ENST00000460211 VCX2Q9H322 139 aa9.58□□□□□ -0.88
ATG4B-213ENST00000460211 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP9.58□□□□□ -0.88
ATG4B-213ENST00000460211 TGIF2-C20orf24A0A0A6YYL0 155 aa9.57□□□□□ -0.88
ATG4B-213ENST00000460211 COX6A2Q02221 97 aa9.57□□□□□ -0.88
ATG4B-213ENST00000460211 CARD19Q96LW7 228 aa9.57□□□□□ -0.88
ATG4B-213ENST00000460211 ALKBH7Q9BT30 221 aaPredicted RBP9.57□□□□□ -0.88
ATG4B-213ENST00000460211 IGHV3OR16-9A0A0B4J2B5 98 aa9.56□□□□□ -0.88
ATG4B-213ENST00000460211 LINC01549A6NIU2 74 aa9.56□□□□□ -0.88
ATG4B-213ENST00000460211 LINC00526Q96FQ7 95 aa9.56□□□□□ -0.88
ATG4B-213ENST00000460211 TRAPPC1Q9Y5R8 145 aa9.56□□□□□ -0.88
ATG4B-213ENST00000460211 IGLV4-69A0A075B6H9 119 aa9.55□□□□□ -0.88
ATG4B-213ENST00000460211 CIRBPQ14011 172 aaKnown RBP9.55□□□□□ -0.88
ATG4B-213ENST00000460211 FA2HQ7L5A8 372 aa9.55□□□□□ -0.88
ATG4B-213ENST00000460211 OR10D4PQ8NGN7 298 aa9.55□□□□□ -0.88
ATG4B-213ENST00000460211 CAMK2N2Q96S95 79 aa9.55□□□□□ -0.88
ATG4B-213ENST00000460211 LINC00474Q9P2X8 69 aa9.55□□□□□ -0.88
ATG4B-213ENST00000460211 IGIPA6NJ69 53 aa9.54□□□□□ -0.88
ATG4B-213ENST00000460211 SPAG11BQ08648 103 aa9.54□□□□□ -0.88
ATG4B-213ENST00000460211 TOMM6Q96B49 74 aa9.54□□□□□ -0.88
ATG4B-213ENST00000460211 C2orf48Q96LS8 159 aa9.54□□□□□ -0.88
ATG4B-213ENST00000460211 SMCO4Q9NRQ5 59 aa9.54□□□□□ -0.88
ATG4B-213ENST00000460211 PANO1I0J062 215 aa9.53□□□□□ -0.88
ATG4B-213ENST00000460211 CHTF8P0CG12 524 aa9.53□□□□□ -0.88
ATG4B-213ENST00000460211 LINC00242Q5T6M2 205 aa9.53□□□□□ -0.88
ATG4B-213ENST00000460211 SPACA4Q8TDM5 124 aa9.53□□□□□ -0.88
ATG4B-213ENST00000460211 ORAOV1Q8WV07 137 aa9.53□□□□□ -0.88
ATG4B-213ENST00000460211 SCGB3A1Q96QR1 104 aa9.53□□□□□ -0.88
ATG4B-213ENST00000460211 AMELXQ99217 191 aa9.53□□□□□ -0.88
ATG4B-213ENST00000460211 TIMM17AQ99595 171 aa9.53□□□□□ -0.88
ATG4B-213ENST00000460211 A0A087WYN8 130 aa9.52□□□□□ -0.89
ATG4B-213ENST00000460211 IGKV2-24A0A0C4DH68 120 aa9.52□□□□□ -0.89
ATG4B-213ENST00000460211 F8WDY8 70 aa9.52□□□□□ -0.89
ATG4B-213ENST00000460211 UBE2D1P51668 147 aa9.52□□□□□ -0.89
ATG4B-213ENST00000460211 SEC11AP67812 179 aa9.52□□□□□ -0.89
ATG4B-213ENST00000460211 MAJINQ3KP22 176 aa9.52□□□□□ -0.89
ATG4B-213ENST00000460211 ERASQ7Z444 233 aa9.52□□□□□ -0.89
ATG4B-213ENST00000460211 A0A087WZ39 114 aa9.51□□□□□ -0.89
ATG4B-213ENST00000460211 LINC01546A6NGU7 62 aa9.51□□□□□ -0.89
ATG4B-213ENST00000460211 LOC107984640A0A0U1RRK4 108 aa9.5□□□□□ -0.89
ATG4B-213ENST00000460211 KRTAP29-1A8MX34 341 aaPredicted RBP9.5□□□□□ -0.89
ATG4B-213ENST00000460211 RPL37AP61513 92 aaKnown RBP9.5□□□□□ -0.89
ATG4B-213ENST00000460211 Q6ZRU5 148 aa9.5□□□□□ -0.89
ATG4B-213ENST00000460211 LINC01561Q8N1V8 128 aa9.5□□□□□ -0.89
ATG4B-213ENST00000460211 NDUFA1O15239 70 aa9.49□□□□□ -0.89
ATG4B-213ENST00000460211 RNF151Q2KHN1 245 aa9.49□□□□□ -0.89
ATG4B-213ENST00000460211 ZC2HC1BQ5TFG8 222 aa9.49□□□□□ -0.89
ATG4B-213ENST00000460211 LINC00173Q6ZV60 143 aa9.49□□□□□ -0.89
ATG4B-213ENST00000460211 PLAC8Q9NZF1 115 aa9.49□□□□□ -0.89
ATG4B-213ENST00000460211 A0A096LNI7 61 aa9.48□□□□□ -0.89
ATG4B-213ENST00000460211 RAB5BP61020 215 aa9.48□□□□□ -0.89
ATG4B-213ENST00000460211 HERVK_113P63121 156 aa9.48□□□□□ -0.89
ATG4B-213ENST00000460211 STPG4Q8N801 248 aa9.48□□□□□ -0.89
ATG4B-213ENST00000460211 C7orf33Q8WU49 177 aa9.48□□□□□ -0.89
ATG4B-213ENST00000460211 GEMIN7Q9H840 131 aaKnown RBP9.48□□□□□ -0.89
ATG4B-213ENST00000460211 GAGE2BQ13066 116 aa9.47□□□□□ -0.89
ATG4B-213ENST00000460211 FAM19A3Q7Z5A8 133 aa9.47□□□□□ -0.89
ATG4B-213ENST00000460211 MRPL35Q9NZE8 188 aaKnown RBP9.47□□□□□ -0.89
ATG4B-213ENST00000460211 UBR4Q5T4S7 5183 aa9.46□□□□□ -0.89
ATG4B-213ENST00000460211 PRSS2P07478 247 aa9.46□□□□□ -0.9
ATG4B-213ENST00000460211 LINC00614P0C842 121 aa9.46□□□□□ -0.9
ATG4B-213ENST00000460211 PTTG1IPP53801 180 aa9.46□□□□□ -0.9
ATG4B-213ENST00000460211 C18orf32Q8TCD1 76 aa9.46□□□□□ -0.9
ATG4B-213ENST00000460211 PACRGQ96M98 296 aaPredicted RBP9.46□□□□□ -0.9
ATG4B-213ENST00000460211 HMCN2Q8NDA2 5059 aa9.45□□□□□ -0.9
ATG4B-213ENST00000460211 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP9.45□□□□□ -0.9
ATG4B-213ENST00000460211 SERTAD4-AS1Q5TG53 156 aa9.45□□□□□ -0.9
ATG4B-213ENST00000460211 SLC7A5P1Q8MH63 180 aa9.45□□□□□ -0.9
ATG4B-213ENST00000460211 LRP1Q07954 4544 aaKnown RBP9.44□□□□□ -0.9
ATG4B-213ENST00000460211 RPL18AQ02543 176 aaKnown RBP9.44□□□□□ -0.9
ATG4B-213ENST00000460211 PMVKQ15126 192 aa9.43□□□□□ -0.9
ATG4B-213ENST00000460211 C6orf226Q5I0X4 101 aa9.43□□□□□ -0.9
ATG4B-213ENST00000460211 UNQ6190/PRO20217Q6UXQ8 127 aa9.43□□□□□ -0.9
ATG4B-213ENST00000460211 YPEL4Q96NS1 127 aa9.43□□□□□ -0.9
ATG4B-213ENST00000460211 CST9LQ9H4G1 147 aa9.43□□□□□ -0.9
ATG4B-213ENST00000460211 A0A0J9YXV3 536 aa9.42□□□□□ -0.9
ATG4B-213ENST00000460211 TINCRA0A1B0GVN0 87 aa9.42□□□□□ -0.9
ATG4B-213ENST00000460211 HBDP02042 147 aa9.42□□□□□ -0.9
ATG4B-213ENST00000460211 CKS1BP61024 79 aa9.42□□□□□ -0.9
ATG4B-213ENST00000460211 KIAA0087Q14695 138 aa9.42□□□□□ -0.9
ATG4B-213ENST00000460211 CBLN2Q8IUK8 224 aa9.42□□□□□ -0.9
ATG4B-213ENST00000460211 LINC00469Q8N7U9 141 aa9.42□□□□□ -0.9
ATG4B-213ENST00000460211 TOMM7Q9P0U1 55 aa9.42□□□□□ -0.9
ATG4B-213ENST00000460211 CDKN2A-AS1Q9UH64 79 aa9.42□□□□□ -0.9
ATG4B-213ENST00000460211 TRBV30A0A0K0K1B3 111 aa9.41□□□□□ -0.9
ATG4B-213ENST00000460211 KRTAP10-4P60372 401 aaPredicted RBP9.41□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 59.6 ms