RNA–Protein interactions for RNA: ENST00000459756.5

COL7A1-203, Transcript of collagen type VII alpha 1 chain, humanhuman

TSL 5

Gene COL7A1, Length 818 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL7A1-203ENST00000459756 SPANXA1Q9NS26 97 aa10.27□□□□□ -0.77
COL7A1-203ENST00000459756 TRAV13-1A0A0B4J241 112 aa10.26□□□□□ -0.77
COL7A1-203ENST00000459756 COX7A2LO14548 114 aa10.26□□□□□ -0.77
COL7A1-203ENST00000459756 PKIGQ9Y2B9 76 aa10.26□□□□□ -0.77
COL7A1-203ENST00000459756 A0A087WYN8 130 aa10.25□□□□□ -0.77
COL7A1-203ENST00000459756 PRSS47A8MTI9 375 aa10.25□□□□□ -0.77
COL7A1-203ENST00000459756 ZNF561-AS1K7EIQ3 104 aa10.25□□□□□ -0.77
COL7A1-203ENST00000459756 SCO1O75880 301 aa10.25□□□□□ -0.77
COL7A1-203ENST00000459756 MALP21145 153 aa10.25□□□□□ -0.77
COL7A1-203ENST00000459756 PRSS3P2Q8NHM4 247 aa10.25□□□□□ -0.77
COL7A1-203ENST00000459756 MRPS36P82909 103 aaKnown RBP10.24□□□□□ -0.77
COL7A1-203ENST00000459756 LINC00526Q96FQ7 95 aa10.24□□□□□ -0.77
COL7A1-203ENST00000459756 CARD19Q96LW7 228 aa10.24□□□□□ -0.77
COL7A1-203ENST00000459756 NXT2Q9NPJ8 142 aaKnown RBP10.24□□□□□ -0.77
COL7A1-203ENST00000459756 J3QL48 77 aa10.23□□□□□ -0.77
COL7A1-203ENST00000459756 PLAC8Q9NZF1 115 aa10.23□□□□□ -0.77
COL7A1-203ENST00000459756 KRTAP29-1A8MX34 341 aaPredicted RBP10.22□□□□□ -0.77
COL7A1-203ENST00000459756 SYCNQ0VAF6 134 aa10.22□□□□□ -0.77
COL7A1-203ENST00000459756 ORMDL2Q53FV1 153 aa10.22□□□□□ -0.77
COL7A1-203ENST00000459756 FAM104AQ969W3 186 aa10.22□□□□□ -0.77
COL7A1-203ENST00000459756 LINC00474Q9P2X8 69 aa10.22□□□□□ -0.77
COL7A1-203ENST00000459756 IGKV2-24A0A0C4DH68 120 aa10.21□□□□□ -0.77
COL7A1-203ENST00000459756 APOMO95445 188 aa10.21□□□□□ -0.77
COL7A1-203ENST00000459756 MAJINQ3KP22 176 aa10.21□□□□□ -0.77
COL7A1-203ENST00000459756 OPRPNQ99935 248 aaPredicted RBP10.21□□□□□ -0.77
COL7A1-203ENST00000459756 IGLV4-69A0A075B6H9 119 aa10.2□□□□□ -0.78
COL7A1-203ENST00000459756 IFITM10A6NMD0 228 aa10.2□□□□□ -0.78
COL7A1-203ENST00000459756 C2orf66Q6UXQ4 117 aa10.2□□□□□ -0.78
COL7A1-203ENST00000459756 FA2HQ7L5A8 372 aa10.2□□□□□ -0.78
COL7A1-203ENST00000459756 C5orf38Q86SI9 138 aa10.2□□□□□ -0.78
COL7A1-203ENST00000459756 PYGO1Q9Y3Y4 419 aa10.2□□□□□ -0.78
COL7A1-203ENST00000459756 A0A096LNI7 61 aa10.19□□□□□ -0.78
COL7A1-203ENST00000459756 C18orf32Q8TCD1 76 aa10.19□□□□□ -0.78
COL7A1-203ENST00000459756 CYSLTR1Q9Y271 337 aa10.19□□□□□ -0.78
COL7A1-203ENST00000459756 PKHD1L1Q86WI1 4243 aa10.19□□□□□ -0.78
COL7A1-203ENST00000459756 TRGC2P03986 189 aa10.18□□□□□ -0.78
COL7A1-203ENST00000459756 STPG4Q8N801 248 aa10.18□□□□□ -0.78
COL7A1-203ENST00000459756 C7orf33Q8WU49 177 aa10.18□□□□□ -0.78
COL7A1-203ENST00000459756 C2orf48Q96LS8 159 aa10.18□□□□□ -0.78
COL7A1-203ENST00000459756 IGHV3OR16-9A0A0B4J2B5 98 aa10.17□□□□□ -0.78
COL7A1-203ENST00000459756 COLCA2A8K830 154 aa10.17□□□□□ -0.78
COL7A1-203ENST00000459756 K7EMI3 77 aa10.17□□□□□ -0.78
COL7A1-203ENST00000459756 ATP6V1G1O75348 118 aa10.17□□□□□ -0.78
COL7A1-203ENST00000459756 OXTP01178 125 aa10.17□□□□□ -0.78
COL7A1-203ENST00000459756 OR10D4PQ8NGN7 298 aa10.17□□□□□ -0.78
COL7A1-203ENST00000459756 CAMK2N2Q96S95 79 aa10.17□□□□□ -0.78
COL7A1-203ENST00000459756 IGLV4-3A0A075B6K6 122 aa10.16□□□□□ -0.78
COL7A1-203ENST00000459756 HNRNPA3P51991 378 aaKnown RBP10.16□□□□□ -0.78
COL7A1-203ENST00000459756 SPAG11BQ08648 103 aa10.16□□□□□ -0.78
COL7A1-203ENST00000459756 Q6ZRU5 148 aa10.16□□□□□ -0.78
COL7A1-203ENST00000459756 TMEM141Q96I45 108 aa10.16□□□□□ -0.78
COL7A1-203ENST00000459756 LOC107984640A0A0U1RRK4 108 aa10.15□□□□□ -0.78
COL7A1-203ENST00000459756 LRP1Q07954 4544 aaKnown RBP10.15□□□□□ -0.78
COL7A1-203ENST00000459756 F8WDY8 70 aa10.14□□□□□ -0.79
COL7A1-203ENST00000459756 PTTG1IPP53801 180 aa10.14□□□□□ -0.79
COL7A1-203ENST00000459756 PMCHL1Q16048 86 aa10.14□□□□□ -0.79
COL7A1-203ENST00000459756 ORAOV1Q8WV07 137 aa10.14□□□□□ -0.79
COL7A1-203ENST00000459756 URB1-AS1Q96HZ7 61 aa10.14□□□□□ -0.79
COL7A1-203ENST00000459756 NPSP0C0P6 89 aa10.13□□□□□ -0.79
COL7A1-203ENST00000459756 LINC00614P0C842 121 aa10.13□□□□□ -0.79
COL7A1-203ENST00000459756 RNF151Q2KHN1 245 aa10.13□□□□□ -0.79
COL7A1-203ENST00000459756 ZC2HC1BQ5TFG8 222 aa10.13□□□□□ -0.79
COL7A1-203ENST00000459756 Q6ZN92 141 aa10.13□□□□□ -0.79
COL7A1-203ENST00000459756 TEX43Q6ZNM6 134 aa10.13□□□□□ -0.79
COL7A1-203ENST00000459756 TOMM6Q96B49 74 aa10.13□□□□□ -0.79
COL7A1-203ENST00000459756 FAT3Q8TDW7 4589 aa10.12□□□□□ -0.79
COL7A1-203ENST00000459756 A0A087WZ39 114 aa10.12□□□□□ -0.79
COL7A1-203ENST00000459756 LINC01546A6NGU7 62 aa10.12□□□□□ -0.79
COL7A1-203ENST00000459756 S100A1P23297 94 aa10.12□□□□□ -0.79
COL7A1-203ENST00000459756 G0S2P27469 103 aa10.12□□□□□ -0.79
COL7A1-203ENST00000459756 GAGE2BQ13066 116 aa10.12□□□□□ -0.79
COL7A1-203ENST00000459756 LINC00242Q5T6M2 205 aa10.12□□□□□ -0.79
COL7A1-203ENST00000459756 SCGB3A1Q96QR1 104 aa10.12□□□□□ -0.79
COL7A1-203ENST00000459756 C2orf88Q9BSF0 95 aa10.12□□□□□ -0.79
COL7A1-203ENST00000459756 RAB5BP61020 215 aa10.11□□□□□ -0.79
COL7A1-203ENST00000459756 VCX2Q9H322 139 aa10.11□□□□□ -0.79
COL7A1-203ENST00000459756 IGIPA6NJ69 53 aa10.1□□□□□ -0.79
COL7A1-203ENST00000459756 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP10.1□□□□□ -0.79
COL7A1-203ENST00000459756 NDUFA1O15239 70 aa10.1□□□□□ -0.79
COL7A1-203ENST00000459756 UBE2D1P51668 147 aa10.1□□□□□ -0.79
COL7A1-203ENST00000459756 BAGE3Q86Y29 109 aa10.1□□□□□ -0.79
COL7A1-203ENST00000459756 AMELXQ99217 191 aa10.1□□□□□ -0.79
COL7A1-203ENST00000459756 MRPL35Q9NZE8 188 aaKnown RBP10.1□□□□□ -0.79
COL7A1-203ENST00000459756 PRR3P79522 188 aaKnown RBP10.09□□□□□ -0.79
COL7A1-203ENST00000459756 LINC00173Q6ZV60 143 aa10.09□□□□□ -0.79
COL7A1-203ENST00000459756 HBDP02042 147 aa10.08□□□□□ -0.8
COL7A1-203ENST00000459756 RPL18AQ02543 176 aaKnown RBP10.08□□□□□ -0.8
COL7A1-203ENST00000459756 PAPPA-AS1Q5QFB9 102 aa10.08□□□□□ -0.8
COL7A1-203ENST00000459756 ERASQ7Z444 233 aa10.08□□□□□ -0.8
COL7A1-203ENST00000459756 TIMM17AQ99595 171 aa10.08□□□□□ -0.8
COL7A1-203ENST00000459756 A0A096LNJ9 63 aa10.07□□□□□ -0.8
COL7A1-203ENST00000459756 A0A0J9YXV3 536 aa10.07□□□□□ -0.8
COL7A1-203ENST00000459756 LINC01561Q8N1V8 128 aa10.07□□□□□ -0.8
COL7A1-203ENST00000459756 HSBP1O75506 76 aa10.06□□□□□ -0.8
COL7A1-203ENST00000459756 KIAA0087Q14695 138 aa10.06□□□□□ -0.8
COL7A1-203ENST00000459756 CHCHD1Q96BP2 118 aaKnown RBP10.06□□□□□ -0.8
COL7A1-203ENST00000459756 LINC01549A6NIU2 74 aa10.05□□□□□ -0.8
COL7A1-203ENST00000459756 NDUFA6P56556 154 aa10.05□□□□□ -0.8
COL7A1-203ENST00000459756 C10orf25Q5T742 122 aa10.05□□□□□ -0.8
COL7A1-203ENST00000459756 UNQ6190/PRO20217Q6UXQ8 127 aa10.05□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 93.7 ms