RNA–Protein interactions for RNA: ENST00000459625.5

HDAC7-217, Transcript of histone deacetylase 7, humanhuman

TSL 2

Gene HDAC7, Length 6,414 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC7-217ENST00000459625 REG3GQ6UW15 175 aa11.74□□□□□ -0.53
HDAC7-217ENST00000459625 Q6ZTC4 211 aa11.74□□□□□ -0.53
HDAC7-217ENST00000459625 SONP18583 2426 aaKnown RBP11.74□□□□□ -0.53
HDAC7-217ENST00000459625 NDUFA7O95182 113 aa11.74□□□□□ -0.53
HDAC7-217ENST00000459625 FAM19A3Q7Z5A8 133 aa11.74□□□□□ -0.53
HDAC7-217ENST00000459625 LST1O00453 97 aa11.74□□□□□ -0.53
HDAC7-217ENST00000459625 XGP55808 180 aa11.73□□□□□ -0.53
HDAC7-217ENST00000459625 MRGPRG-AS1Q2M3A8 158 aa11.72□□□□□ -0.53
HDAC7-217ENST00000459625 C11orf71Q6IPW1 123 aa11.72□□□□□ -0.53
HDAC7-217ENST00000459625 UNQ6190/PRO20217Q6UXQ8 127 aa11.72□□□□□ -0.53
HDAC7-217ENST00000459625 PRR3P79522 188 aaKnown RBP11.71□□□□□ -0.53
HDAC7-217ENST00000459625 TRBV7-6A0A0J9YX20 115 aa11.71□□□□□ -0.53
HDAC7-217ENST00000459625 CRIP1P50238 77 aa11.71□□□□□ -0.53
HDAC7-217ENST00000459625 SBSPONQ8IVN8 264 aa11.71□□□□□ -0.54
HDAC7-217ENST00000459625 TSHBP01222 138 aa11.71□□□□□ -0.54
HDAC7-217ENST00000459625 PRRC2AP48634 2157 aaKnown RBP11.7□□□□□ -0.54
HDAC7-217ENST00000459625 PRR9Q5T870 116 aa11.7□□□□□ -0.54
HDAC7-217ENST00000459625 MUC4Q99102 2169 aa11.7□□□□□ -0.54
HDAC7-217ENST00000459625 CDSNQ15517 529 aa11.69□□□□□ -0.54
HDAC7-217ENST00000459625 MRPS12O15235 138 aaKnown RBP11.69□□□□□ -0.54
HDAC7-217ENST00000459625 MBD6Q96DN6 1003 aa11.69□□□□□ -0.54
HDAC7-217ENST00000459625 COX6A2Q02221 97 aa11.68□□□□□ -0.54
HDAC7-217ENST00000459625 LINC00208Q96KT6 92 aa11.68□□□□□ -0.54
HDAC7-217ENST00000459625 CRIP2P52943 208 aaPredicted RBP11.67□□□□□ -0.54
HDAC7-217ENST00000459625 SPG11Q96JI7 2443 aa11.67□□□□□ -0.54
HDAC7-217ENST00000459625 A0A1B0GXF2 115 aa11.67□□□□□ -0.54
HDAC7-217ENST00000459625 AVPP01185 164 aa11.67□□□□□ -0.54
HDAC7-217ENST00000459625 C2orf48Q96LS8 159 aa11.66□□□□□ -0.54
HDAC7-217ENST00000459625 NOTCH2Q04721 2471 aa11.66□□□□□ -0.54
HDAC7-217ENST00000459625 TECTAO75443 2155 aa11.66□□□□□ -0.54
HDAC7-217ENST00000459625 RNF185Q96GF1 192 aa11.66□□□□□ -0.54
HDAC7-217ENST00000459625 Q9BRP9 147 aa11.66□□□□□ -0.54
HDAC7-217ENST00000459625 TIMM17BO60830 172 aa11.65□□□□□ -0.54
HDAC7-217ENST00000459625 EXPH5Q8NEV8 1989 aa11.65□□□□□ -0.54
HDAC7-217ENST00000459625 RNASE3P12724 160 aaKnown RBP11.65□□□□□ -0.54
HDAC7-217ENST00000459625 UQCRQO14949 82 aa11.65□□□□□ -0.54
HDAC7-217ENST00000459625 PYGO1Q9Y3Y4 419 aa11.65□□□□□ -0.54
HDAC7-217ENST00000459625 CSPG4Q6UVK1 2322 aa11.65□□□□□ -0.55
HDAC7-217ENST00000459625 LINC01547P58512 204 aaPredicted RBP11.64□□□□□ -0.55
HDAC7-217ENST00000459625 V9GYY9 64 aa11.64□□□□□ -0.55
HDAC7-217ENST00000459625 HIVEP3Q5T1R4 2406 aa11.63□□□□□ -0.55
HDAC7-217ENST00000459625 BRWD1-AS2P59051 145 aa11.63□□□□□ -0.55
HDAC7-217ENST00000459625 ATP5EP2Q5VTU8 51 aa11.63□□□□□ -0.55
HDAC7-217ENST00000459625 BEAN1Q3B7T3 259 aa11.63□□□□□ -0.55
HDAC7-217ENST00000459625 TRBV10-3A0A0K0K1G6 114 aa11.63□□□□□ -0.55
HDAC7-217ENST00000459625 IGKV2D-30A0A075B6S6 120 aa11.62□□□□□ -0.55
HDAC7-217ENST00000459625 IGKV2-30P06310 120 aa11.62□□□□□ -0.55
HDAC7-217ENST00000459625 SOSTDC1Q6X4U4 206 aa11.61□□□□□ -0.55
HDAC7-217ENST00000459625 BDP1A6H8Y1 2624 aa11.61□□□□□ -0.55
HDAC7-217ENST00000459625 EBI3Q14213 229 aa11.61□□□□□ -0.55
HDAC7-217ENST00000459625 PRLHP81277 87 aa11.61□□□□□ -0.55
HDAC7-217ENST00000459625 SPACA4Q8TDM5 124 aa11.61□□□□□ -0.55
HDAC7-217ENST00000459625 TRBV30A0A0K0K1B3 111 aa11.6□□□□□ -0.55
HDAC7-217ENST00000459625 GAS8-AS1O95177 125 aa11.59□□□□□ -0.55
HDAC7-217ENST00000459625 C11orf21Q9P2W6 132 aa11.59□□□□□ -0.55
HDAC7-217ENST00000459625 COX17Q14061 63 aa11.58□□□□□ -0.56
HDAC7-217ENST00000459625 CDC42SE2Q9NRR3 84 aa11.58□□□□□ -0.56
HDAC7-217ENST00000459625 IGLV4-60A0A075B6I1 120 aa11.58□□□□□ -0.56
HDAC7-217ENST00000459625 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP11.57□□□□□ -0.56
HDAC7-217ENST00000459625 Q8IZM0 81 aa11.57□□□□□ -0.56
HDAC7-217ENST00000459625 ARHGAP32A7KAX9 2087 aa11.57□□□□□ -0.56
HDAC7-217ENST00000459625 A0A087WSZ3 146 aa11.56□□□□□ -0.56
HDAC7-217ENST00000459625 CUL9Q8IWT3 2517 aa11.55□□□□□ -0.56
HDAC7-217ENST00000459625 PLXNB1O43157 2135 aa11.55□□□□□ -0.56
HDAC7-217ENST00000459625 IGLV1-40P01703 118 aa11.55□□□□□ -0.56
HDAC7-217ENST00000459625 Q6ZPA2 131 aa11.55□□□□□ -0.56
HDAC7-217ENST00000459625 ODF3L2Q3SX64 289 aa11.54□□□□□ -0.56
HDAC7-217ENST00000459625 C7orf65Q6ZTY9 151 aa11.54□□□□□ -0.56
HDAC7-217ENST00000459625 NRACQ8N912 160 aa11.54□□□□□ -0.56
HDAC7-217ENST00000459625 LINC00574Q9H8X3 128 aa11.53□□□□□ -0.56
HDAC7-217ENST00000459625 A8MTW9 85 aa11.53□□□□□ -0.56
HDAC7-217ENST00000459625 CRYGAP11844 174 aa11.53□□□□□ -0.56
HDAC7-217ENST00000459625 NUP210LQ5VU65 1888 aa11.53□□□□□ -0.56
HDAC7-217ENST00000459625 P0C879 139 aa11.52□□□□□ -0.57
HDAC7-217ENST00000459625 RAI1Q7Z5J4 1906 aaPredicted RBP11.52□□□□□ -0.57
HDAC7-217ENST00000459625 HCG22E2RYF7 251 aa11.52□□□□□ -0.57
HDAC7-217ENST00000459625 Q9UF83 564 aa11.52□□□□□ -0.57
HDAC7-217ENST00000459625 ALPK3Q96L96 1907 aa11.52□□□□□ -0.57
HDAC7-217ENST00000459625 NTM-AS1Q6ZSK4 140 aa11.52□□□□□ -0.57
HDAC7-217ENST00000459625 MDFIQ99750 246 aa11.51□□□□□ -0.57
HDAC7-217ENST00000459625 PSPHP1O15172 72 aa11.51□□□□□ -0.57
HDAC7-217ENST00000459625 LINC00694P0DN24 101 aa11.51□□□□□ -0.57
HDAC7-217ENST00000459625 EGFEM1PQ0D2K5 195 aa11.51□□□□□ -0.57
HDAC7-217ENST00000459625 A0A087WYN8 130 aa11.51□□□□□ -0.57
HDAC7-217ENST00000459625 J3QL48 77 aa11.51□□□□□ -0.57
HDAC7-217ENST00000459625 H0Y9P7 68 aa11.5□□□□□ -0.57
HDAC7-217ENST00000459625 KLLNB2CW77 178 aa11.5□□□□□ -0.57
HDAC7-217ENST00000459625 SERTAD4-AS1Q5TG53 156 aa11.5□□□□□ -0.57
HDAC7-217ENST00000459625 NDUFC1O43677 76 aa11.5□□□□□ -0.57
HDAC7-217ENST00000459625 C11orf1Q9H5F2 150 aa11.49□□□□□ -0.57
HDAC7-217ENST00000459625 LINC00575Q6W349 94 aa11.49□□□□□ -0.57
HDAC7-217ENST00000459625 MRPS36P82909 103 aaKnown RBP11.49□□□□□ -0.57
HDAC7-217ENST00000459625 LIMD2Q9BT23 127 aa11.49□□□□□ -0.57
HDAC7-217ENST00000459625 FHL2Q14192 279 aa11.49□□□□□ -0.57
HDAC7-217ENST00000459625 Q8N814 137 aa11.48□□□□□ -0.57
HDAC7-217ENST00000459625 PCDH15Q96QU1 1955 aa11.48□□□□□ -0.57
HDAC7-217ENST00000459625 FAM229AH3BQW9 127 aa11.48□□□□□ -0.57
HDAC7-217ENST00000459625 CEP192Q8TEP8 1941 aa11.47□□□□□ -0.57
HDAC7-217ENST00000459625 Q8N6K4 173 aa11.47□□□□□ -0.57
HDAC7-217ENST00000459625 TET2Q6N021 2002 aaPredicted RBP11.47□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 166.7 ms