RNA–Protein interactions for RNA: ENST00000458059.7

CNEP1R1-203, Transcript of CTD nuclear envelope phosphatase 1 regulatory subunit 1, humanhuman

TSL 1 (best) BASIC

Gene CNEP1R1, Length 2,965 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNEP1R1-203ENST00000458059 BBC3Q96PG8 261 aaPredicted RBP13.95□□□□□ -0.18
CNEP1R1-203ENST00000458059 C11orf68Q9H3H3 251 aaKnown RBP13.95□□□□□ -0.18
CNEP1R1-203ENST00000458059 GAGE6Q13070 117 aa13.94□□□□□ -0.18
CNEP1R1-203ENST00000458059 H3BT86 120 aa13.94□□□□□ -0.18
CNEP1R1-203ENST00000458059 M0QXV9 152 aa13.94□□□□□ -0.18
CNEP1R1-203ENST00000458059 IFITM1P13164 125 aa13.94□□□□□ -0.18
CNEP1R1-203ENST00000458059 Q9HAA7 133 aa13.94□□□□□ -0.18
CNEP1R1-203ENST00000458059 NOTCH2Q04721 2471 aa13.94□□□□□ -0.18
CNEP1R1-203ENST00000458059 IGLV5-45A0A087WSX0 123 aa13.93□□□□□ -0.18
CNEP1R1-203ENST00000458059 HIST2H2BCQ6DN03 193 aa13.92□□□□□ -0.18
CNEP1R1-203ENST00000458059 IGLV5-39A0A0G2JS06 123 aa13.92□□□□□ -0.18
CNEP1R1-203ENST00000458059 CCL24O00175 119 aa13.92□□□□□ -0.18
CNEP1R1-203ENST00000458059 CDC42SE2Q9NRR3 84 aa13.92□□□□□ -0.18
CNEP1R1-203ENST00000458059 ITPR2Q14571 2701 aa13.91□□□□□ -0.18
CNEP1R1-203ENST00000458059 FAM218AQ96MZ4 157 aa13.91□□□□□ -0.18
CNEP1R1-203ENST00000458059 TIMM17BO60830 172 aa13.9□□□□□ -0.18
CNEP1R1-203ENST00000458059 DEFB113Q30KQ7 82 aa13.89□□□□□ -0.19
CNEP1R1-203ENST00000458059 CHCHD5Q9BSY4 110 aa13.89□□□□□ -0.19
CNEP1R1-203ENST00000458059 DNAJC9-AS1A6NH13 148 aa13.88□□□□□ -0.19
CNEP1R1-203ENST00000458059 F5H768 121 aa13.88□□□□□ -0.19
CNEP1R1-203ENST00000458059 COX7A2LO14548 114 aa13.88□□□□□ -0.19
CNEP1R1-203ENST00000458059 MIR7-3HGQ8N6C7 128 aa13.88□□□□□ -0.19
CNEP1R1-203ENST00000458059 WFDC11Q8NEX6 87 aa13.88□□□□□ -0.19
CNEP1R1-203ENST00000458059 TMEM243Q9BU79 118 aa13.88□□□□□ -0.19
CNEP1R1-203ENST00000458059 PFN2P35080 140 aa13.87□□□□□ -0.19
CNEP1R1-203ENST00000458059 DAZ2Q13117 558 aaKnown RBP13.87□□□□□ -0.19
CNEP1R1-203ENST00000458059 DAZ4Q86SG3 579 aaKnown RBP13.87□□□□□ -0.19
CNEP1R1-203ENST00000458059 DAZ3Q9NR90 486 aaKnown RBP13.87□□□□□ -0.19
CNEP1R1-203ENST00000458059 TRGV4A0A0C4DH28 118 aa13.87□□□□□ -0.19
CNEP1R1-203ENST00000458059 ESM1Q9NQ30 184 aa13.87□□□□□ -0.19
CNEP1R1-203ENST00000458059 C5orf38Q86SI9 138 aa13.86□□□□□ -0.19
CNEP1R1-203ENST00000458059 IGLV4-60A0A075B6I1 120 aa13.86□□□□□ -0.19
CNEP1R1-203ENST00000458059 LINC00158P58513 81 aa13.86□□□□□ -0.19
CNEP1R1-203ENST00000458059 BAALC-AS2P0C853 105 aa13.86□□□□□ -0.19
CNEP1R1-203ENST00000458059 CLPSL2Q6UWE3 100 aa13.85□□□□□ -0.19
CNEP1R1-203ENST00000458059 GIG44P09565 113 aaPredicted RBP13.84□□□□□ -0.19
CNEP1R1-203ENST00000458059 DEFB130BP0DP73 79 aa13.84□□□□□ -0.19
CNEP1R1-203ENST00000458059 DEFB130AP0DP74 79 aa13.84□□□□□ -0.19
CNEP1R1-203ENST00000458059 A0A096LPF7 62 aa13.83□□□□□ -0.19
CNEP1R1-203ENST00000458059 LINC00337Q8N6G1 96 aa13.83□□□□□ -0.2
CNEP1R1-203ENST00000458059 VWFP04275 2813 aa13.82□□□□□ -0.2
CNEP1R1-203ENST00000458059 IL17DQ8TAD2 202 aa13.82□□□□□ -0.2
CNEP1R1-203ENST00000458059 SMCR5Q8TEV8 140 aa13.82□□□□□ -0.2
CNEP1R1-203ENST00000458059 ATP5G1P05496 136 aa13.82□□□□□ -0.2
CNEP1R1-203ENST00000458059 SHISA2Q6UWI4 295 aa13.82□□□□□ -0.2
CNEP1R1-203ENST00000458059 TRBV10-1A0A0K0K1A3 114 aa13.81□□□□□ -0.2
CNEP1R1-203ENST00000458059 COX7B2Q8TF08 81 aa13.81□□□□□ -0.2
CNEP1R1-203ENST00000458059 SND1-IT1Q9HBX3 110 aa13.81□□□□□ -0.2
CNEP1R1-203ENST00000458059 CRPP02741 224 aa13.8□□□□□ -0.2
CNEP1R1-203ENST00000458059 GAGE2AQ6NT46 116 aa13.8□□□□□ -0.2
CNEP1R1-203ENST00000458059 TENM4Q6N022 2769 aa13.79□□□□□ -0.2
CNEP1R1-203ENST00000458059 PLAC8L1A1L4L8 177 aa13.79□□□□□ -0.2
CNEP1R1-203ENST00000458059 FAM236AA0A1B0GUQ0 79 aa13.79□□□□□ -0.2
CNEP1R1-203ENST00000458059 FAM236BA0A1B0GV22 79 aa13.79□□□□□ -0.2
CNEP1R1-203ENST00000458059 OR13C6PQ8NH95 151 aa13.79□□□□□ -0.2
CNEP1R1-203ENST00000458059 LINC01600Q96MT4 127 aa13.79□□□□□ -0.2
CNEP1R1-203ENST00000458059 CSDC2Q9Y534 153 aaKnown RBP13.78□□□□□ -0.2
CNEP1R1-203ENST00000458059 C9orf129Q5T035 196 aaKnown RBP13.77□□□□□ -0.2
CNEP1R1-203ENST00000458059 IGKV2-28A0A075B6P5 120 aa13.77□□□□□ -0.21
CNEP1R1-203ENST00000458059 A0A087WYN8 130 aa13.77□□□□□ -0.21
CNEP1R1-203ENST00000458059 IGKV2D-28P01615 120 aa13.77□□□□□ -0.21
CNEP1R1-203ENST00000458059 KRTAP1-3Q8IUG1 177 aa13.77□□□□□ -0.21
CNEP1R1-203ENST00000458059 XCL1P47992 114 aa13.76□□□□□ -0.21
CNEP1R1-203ENST00000458059 PAX4O43316 350 aa13.75□□□□□ -0.21
CNEP1R1-203ENST00000458059 SLPIP03973 132 aa13.75□□□□□ -0.21
CNEP1R1-203ENST00000458059 HERV-K104P63124 156 aa13.75□□□□□ -0.21
CNEP1R1-203ENST00000458059 C22orf24Q9Y442 160 aa13.75□□□□□ -0.21
CNEP1R1-203ENST00000458059 SMIM11BQ8TCY0 68 aa13.74□□□□□ -0.21
CNEP1R1-203ENST00000458059 FASNP49327 2511 aaKnown RBP13.74□□□□□ -0.21
CNEP1R1-203ENST00000458059 CCL18P55774 89 aa13.74□□□□□ -0.21
CNEP1R1-203ENST00000458059 DEFB121Q5J5C9 76 aa13.74□□□□□ -0.21
CNEP1R1-203ENST00000458059 Q6Q795 121 aa13.74□□□□□ -0.21
CNEP1R1-203ENST00000458059 COPS9Q8WXC6 57 aa13.74□□□□□ -0.21
CNEP1R1-203ENST00000458059 TRAV25A0A0B4J276 109 aa13.74□□□□□ -0.21
CNEP1R1-203ENST00000458059 ZNF843Q8N446 348 aa13.73□□□□□ -0.21
CNEP1R1-203ENST00000458059 C16orf74Q96GX8 76 aa13.73□□□□□ -0.21
CNEP1R1-203ENST00000458059 FAM240AA0A1B0GVK7 77 aa13.73□□□□□ -0.21
CNEP1R1-203ENST00000458059 LINC01006Q8NI28 216 aa13.73□□□□□ -0.21
CNEP1R1-203ENST00000458059 DNAL4O96015 105 aa13.72□□□□□ -0.21
CNEP1R1-203ENST00000458059 C14orf132Q9NPU4 83 aa13.72□□□□□ -0.21
CNEP1R1-203ENST00000458059 TRBV6-8A0A0A6YYG3 113 aa13.72□□□□□ -0.21
CNEP1R1-203ENST00000458059 DEFB4AO15263 64 aa13.71□□□□□ -0.22
CNEP1R1-203ENST00000458059 TRACP01848 142 aa13.71□□□□□ -0.22
CNEP1R1-203ENST00000458059 PRR3P79522 188 aaKnown RBP13.71□□□□□ -0.22
CNEP1R1-203ENST00000458059 FHL2Q14192 279 aa13.71□□□□□ -0.22
CNEP1R1-203ENST00000458059 FAM19A3Q7Z5A8 133 aa13.71□□□□□ -0.22
CNEP1R1-203ENST00000458059 TRAV13-2A0A0B4J235 113 aa13.7□□□□□ -0.22
CNEP1R1-203ENST00000458059 MALP21145 153 aa13.7□□□□□ -0.22
CNEP1R1-203ENST00000458059 LECT2O14960 151 aa13.7□□□□□ -0.22
CNEP1R1-203ENST00000458059 C6orf226Q5I0X4 101 aa13.7□□□□□ -0.22
CNEP1R1-203ENST00000458059 HELZ2Q9BYK8 2649 aaKnown RBP13.69□□□□□ -0.22
CNEP1R1-203ENST00000458059 IGHV3OR16-9A0A0B4J2B5 98 aa13.69□□□□□ -0.22
CNEP1R1-203ENST00000458059 SMIM20Q8N5G0 67 aa13.69□□□□□ -0.22
CNEP1R1-203ENST00000458059 TRBV6-4A0A1B0GX49 114 aa13.68□□□□□ -0.22
CNEP1R1-203ENST00000458059 IGLV10-54A0A075B6I4 117 aa13.67□□□□□ -0.22
CNEP1R1-203ENST00000458059 GYPEP15421 78 aa13.67□□□□□ -0.22
CNEP1R1-203ENST00000458059 Q8N3U1 123 aa13.67□□□□□ -0.22
CNEP1R1-203ENST00000458059 C19orf73Q9NVV2 129 aa13.67□□□□□ -0.22
CNEP1R1-203ENST00000458059 NCR3O14931 201 aa13.66□□□□□ -0.22
CNEP1R1-203ENST00000458059 RPL28P46779 137 aaKnown RBP13.66□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms