RNA–Protein interactions for RNA: ENST00000457039.6

SMPD4-215, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 5

Gene SMPD4, Length 940 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-215ENST00000457039 FAM19A3Q7Z5A8 133 aa9.2□□□□□ -0.94
SMPD4-215ENST00000457039 C2orf88Q9BSF0 95 aa9.2□□□□□ -0.94
SMPD4-215ENST00000457039 HERC2O95714 4834 aa9.19□□□□□ -0.94
SMPD4-215ENST00000457039 GVQW2A0A096LPI5 108 aaPredicted RBP9.19□□□□□ -0.94
SMPD4-215ENST00000457039 IGHV1-58A0A0C4DH39 117 aa9.19□□□□□ -0.94
SMPD4-215ENST00000457039 COX7A2LO14548 114 aa9.19□□□□□ -0.94
SMPD4-215ENST00000457039 GCSHP23434 173 aa9.19□□□□□ -0.94
SMPD4-215ENST00000457039 KRTAP10-1P60331 282 aa9.19□□□□□ -0.94
SMPD4-215ENST00000457039 hDV102S1A0JD36 115 aa9.18□□□□□ -0.94
SMPD4-215ENST00000457039 SLPIP03973 132 aa9.18□□□□□ -0.94
SMPD4-215ENST00000457039 CNBPP62633 177 aaKnown RBP9.18□□□□□ -0.94
SMPD4-215ENST00000457039 HSPG2P98160 4391 aa9.18□□□□□ -0.94
SMPD4-215ENST00000457039 COX6A2Q02221 97 aa9.18□□□□□ -0.94
SMPD4-215ENST00000457039 C5orf38Q86SI9 138 aa9.18□□□□□ -0.94
SMPD4-215ENST00000457039 BAGE3Q86Y29 109 aa9.18□□□□□ -0.94
SMPD4-215ENST00000457039 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP9.17□□□□□ -0.94
SMPD4-215ENST00000457039 HIGD2BQ4VC39 106 aa9.17□□□□□ -0.94
SMPD4-215ENST00000457039 HIST1H2BKO60814 126 aa9.16□□□□□ -0.94
SMPD4-215ENST00000457039 SERF1AO75920 110 aa9.16□□□□□ -0.94
SMPD4-215ENST00000457039 HIST1H2BJP06899 126 aa9.16□□□□□ -0.94
SMPD4-215ENST00000457039 HIST1H2BOP23527 126 aa9.16□□□□□ -0.94
SMPD4-215ENST00000457039 HIST1H2BBP33778 126 aa9.16□□□□□ -0.94
SMPD4-215ENST00000457039 HIST1H2BDP58876 126 aa9.16□□□□□ -0.94
SMPD4-215ENST00000457039 HIST1H2BCP62807 126 aa9.16□□□□□ -0.94
SMPD4-215ENST00000457039 HIST2H2BEQ16778 126 aa9.16□□□□□ -0.94
SMPD4-215ENST00000457039 HIST2H2BFQ5QNW6 126 aaPredicted RBP9.16□□□□□ -0.94
SMPD4-215ENST00000457039 HIST1H2BHQ93079 126 aa9.16□□□□□ -0.94
SMPD4-215ENST00000457039 HIST1H2BNQ99877 126 aa9.16□□□□□ -0.94
SMPD4-215ENST00000457039 HIST1H2BMQ99879 126 aa9.16□□□□□ -0.94
SMPD4-215ENST00000457039 CST9LQ9H4G1 147 aa9.16□□□□□ -0.94
SMPD4-215ENST00000457039 A0A087WZ39 114 aa9.15□□□□□ -0.94
SMPD4-215ENST00000457039 NUPR1O60356 82 aa9.15□□□□□ -0.94
SMPD4-215ENST00000457039 HSBP1O75506 76 aa9.15□□□□□ -0.94
SMPD4-215ENST00000457039 ATP5LO75964 103 aa9.15□□□□□ -0.94
SMPD4-215ENST00000457039 MALP21145 153 aa9.15□□□□□ -0.94
SMPD4-215ENST00000457039 PMVKQ15126 192 aa9.15□□□□□ -0.94
SMPD4-215ENST00000457039 LINC01620Q4KN68 170 aa9.15□□□□□ -0.94
SMPD4-215ENST00000457039 C9orf163Q8N9P6 203 aa9.15□□□□□ -0.94
SMPD4-215ENST00000457039 IGHV3-64A0A075B6Q5 118 aa9.14□□□□□ -0.95
SMPD4-215ENST00000457039 A0A0J9YXV3 536 aa9.14□□□□□ -0.95
SMPD4-215ENST00000457039 SEC11AP67812 179 aa9.14□□□□□ -0.95
SMPD4-215ENST00000457039 FAM19A2Q8N3H0 131 aa9.14□□□□□ -0.95
SMPD4-215ENST00000457039 CDK2AP2O75956 126 aa9.13□□□□□ -0.95
SMPD4-215ENST00000457039 APOMO95445 188 aa9.13□□□□□ -0.95
SMPD4-215ENST00000457039 HERVK_113P63121 156 aa9.13□□□□□ -0.95
SMPD4-215ENST00000457039 LINC01561Q8N1V8 128 aa9.13□□□□□ -0.95
SMPD4-215ENST00000457039 LINC00526Q96FQ7 95 aa9.13□□□□□ -0.95
SMPD4-215ENST00000457039 IGLV5-45A0A087WSX0 123 aa9.12□□□□□ -0.95
SMPD4-215ENST00000457039 TINCRA0A1B0GVN0 87 aa9.12□□□□□ -0.95
SMPD4-215ENST00000457039 Q6ZSA8 131 aa9.12□□□□□ -0.95
SMPD4-215ENST00000457039 OR10D4PQ8NGN7 298 aa9.12□□□□□ -0.95
SMPD4-215ENST00000457039 IGLV4-69A0A075B6H9 119 aa9.11□□□□□ -0.95
SMPD4-215ENST00000457039 TRAV16A0A0A6YYK6 109 aaPredicted RBP9.11□□□□□ -0.95
SMPD4-215ENST00000457039 ZNF561-AS1K7EIQ3 104 aa9.11□□□□□ -0.95
SMPD4-215ENST00000457039 IFI27L1Q96BM0 104 aa9.11□□□□□ -0.95
SMPD4-215ENST00000457039 GEMIN7Q9H840 131 aaKnown RBP9.11□□□□□ -0.95
SMPD4-215ENST00000457039 FAM30AQ9NZY2 134 aa9.11□□□□□ -0.95
SMPD4-215ENST00000457039 CDKN2A-AS1Q9UH64 79 aa9.11□□□□□ -0.95
SMPD4-215ENST00000457039 IGLC3P0DOY3 106 aa9.1□□□□□ -0.95
SMPD4-215ENST00000457039 SPAG11BQ08648 103 aa9.1□□□□□ -0.95
SMPD4-215ENST00000457039 SDIM1Q6ZPB5 146 aa9.1□□□□□ -0.95
SMPD4-215ENST00000457039 ORAOV1Q8WV07 137 aa9.1□□□□□ -0.95
SMPD4-215ENST00000457039 C2orf48Q96LS8 159 aa9.1□□□□□ -0.95
SMPD4-215ENST00000457039 XGP55808 180 aa9.09□□□□□ -0.95
SMPD4-215ENST00000457039 NDUFA6P56556 154 aa9.09□□□□□ -0.95
SMPD4-215ENST00000457039 KIAA0087Q14695 138 aa9.09□□□□□ -0.95
SMPD4-215ENST00000457039 COA6Q5JTJ3 125 aaKnown RBP9.09□□□□□ -0.95
SMPD4-215ENST00000457039 TRAV12-1A0A0B4J245 112 aa9.08□□□□□ -0.96
SMPD4-215ENST00000457039 LEPROTL1O95214 131 aa9.08□□□□□ -0.96
SMPD4-215ENST00000457039 SYCNQ0VAF6 134 aa9.08□□□□□ -0.96
SMPD4-215ENST00000457039 LINC00469Q8N7U9 141 aa9.08□□□□□ -0.96
SMPD4-215ENST00000457039 FAT1Q14517 4588 aa9.08□□□□□ -0.96
SMPD4-215ENST00000457039 F8WDY8 70 aa9.07□□□□□ -0.96
SMPD4-215ENST00000457039 Q6ZRU5 148 aa9.07□□□□□ -0.96
SMPD4-215ENST00000457039 CARD19Q96LW7 228 aa9.07□□□□□ -0.96
SMPD4-215ENST00000457039 CAMK2N2Q96S95 79 aa9.07□□□□□ -0.96
SMPD4-215ENST00000457039 CHAC1Q9BUX1 264 aa9.07□□□□□ -0.96
SMPD4-215ENST00000457039 SMIM1B2RUZ4 78 aa9.06□□□□□ -0.96
SMPD4-215ENST00000457039 C11orf86A6NJI1 115 aa9.05□□□□□ -0.96
SMPD4-215ENST00000457039 ZNF22P17026 224 aaPredicted RBP9.05□□□□□ -0.96
SMPD4-215ENST00000457039 HSPB8Q9UJY1 196 aa9.05□□□□□ -0.96
SMPD4-215ENST00000457039 CHTOPQ9Y3Y2 248 aaKnown RBP9.05□□□□□ -0.96
SMPD4-215ENST00000457039 PANO1I0J062 215 aa9.04□□□□□ -0.96
SMPD4-215ENST00000457039 NDUFA1O15239 70 aa9.04□□□□□ -0.96
SMPD4-215ENST00000457039 FABP4P15090 132 aa9.04□□□□□ -0.96
SMPD4-215ENST00000457039 CIRBPQ14011 172 aaKnown RBP9.04□□□□□ -0.96
SMPD4-215ENST00000457039 RNF151Q2KHN1 245 aa9.04□□□□□ -0.96
SMPD4-215ENST00000457039 C10orf25Q5T742 122 aa9.04□□□□□ -0.96
SMPD4-215ENST00000457039 Q8IZM0 81 aa9.04□□□□□ -0.96
SMPD4-215ENST00000457039 PACRGQ96M98 296 aaPredicted RBP9.04□□□□□ -0.96
SMPD4-215ENST00000457039 MRPL35Q9NZE8 188 aaKnown RBP9.04□□□□□ -0.96
SMPD4-215ENST00000457039 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP9.04□□□□□ -0.96
SMPD4-215ENST00000457039 F8VRH5 84 aa9.03□□□□□ -0.96
SMPD4-215ENST00000457039 HAMPP81172 84 aa9.03□□□□□ -0.96
SMPD4-215ENST00000457039 ODF1Q14990 250 aa9.03□□□□□ -0.96
SMPD4-215ENST00000457039 UNQ6190/PRO20217Q6UXQ8 127 aa9.03□□□□□ -0.96
SMPD4-215ENST00000457039 KRTAP17-1Q9BYP8 105 aa9.03□□□□□ -0.96
SMPD4-215ENST00000457039 H3BRM9 83 aa9.02□□□□□ -0.97
SMPD4-215ENST00000457039 SPINK8P0C7L1 97 aa9.02□□□□□ -0.97
SMPD4-215ENST00000457039 C2orf82Q6UX34 121 aa9.02□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 67.3 ms