RNA–Protein interactions for RNA: ENST00000456459.1

PCDH9-AS4-201, PCDH9 antisense RNA 4, humanhuman

TSL 3 BASIC

Gene PCDH9-AS4, Length 436 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH9-AS4-201ENST00000456459 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP1.3□□□□□ -2.2
PCDH9-AS4-201ENST00000456459 CCL25O15444 150 aa1.3□□□□□ -2.2
PCDH9-AS4-201ENST00000456459 SSSCA1O60232 199 aa1.3□□□□□ -2.2
PCDH9-AS4-201ENST00000456459 TCRAP04437 139 aa1.3□□□□□ -2.2
PCDH9-AS4-201ENST00000456459 MGPP08493 103 aa1.3□□□□□ -2.2
PCDH9-AS4-201ENST00000456459 NBEAP1P0C6P0 100 aa1.3□□□□□ -2.2
PCDH9-AS4-201ENST00000456459 FAM236CP0DP71 79 aa1.3□□□□□ -2.2
PCDH9-AS4-201ENST00000456459 PYYP10082 97 aa1.3□□□□□ -2.2
PCDH9-AS4-201ENST00000456459 TAS2R45P59539 299 aa1.3□□□□□ -2.2
PCDH9-AS4-201ENST00000456459 RANP62826 216 aaKnown RBP1.3□□□□□ -2.2
PCDH9-AS4-201ENST00000456459 BAXQ07812 192 aa1.3□□□□□ -2.2
PCDH9-AS4-201ENST00000456459 SMAGPQ0VAQ4 97 aa1.3□□□□□ -2.2
PCDH9-AS4-201ENST00000456459 PPP1R1AQ13522 171 aa1.3□□□□□ -2.2
PCDH9-AS4-201ENST00000456459 C6orf99Q4VX62 202 aa1.3□□□□□ -2.2
PCDH9-AS4-201ENST00000456459 KHDC3LQ587J8 217 aa1.3□□□□□ -2.2
PCDH9-AS4-201ENST00000456459 SPANXN2Q5MJ10 180 aa1.3□□□□□ -2.2
PCDH9-AS4-201ENST00000456459 IZUMO2Q6UXV1 221 aa1.3□□□□□ -2.2
PCDH9-AS4-201ENST00000456459 PATE2Q6UY27 113 aa1.3□□□□□ -2.2
PCDH9-AS4-201ENST00000456459 GOLT1AQ6ZVE7 132 aa1.3□□□□□ -2.2
PCDH9-AS4-201ENST00000456459 LHFPL1Q86WI0 220 aa1.3□□□□□ -2.2
PCDH9-AS4-201ENST00000456459 SNX29P2Q8IUI4 249 aa1.3□□□□□ -2.2
PCDH9-AS4-201ENST00000456459 NUP35Q8NFH5 326 aa1.3□□□□□ -2.2
PCDH9-AS4-201ENST00000456459 GLYATL2Q8WU03 294 aa1.3□□□□□ -2.2
PCDH9-AS4-201ENST00000456459 AP3S1Q92572 193 aa1.3□□□□□ -2.2
PCDH9-AS4-201ENST00000456459 SFRP2Q96HF1 295 aa1.3□□□□□ -2.2
PCDH9-AS4-201ENST00000456459 AP1S3Q96PC3 154 aa1.3□□□□□ -2.2
PCDH9-AS4-201ENST00000456459 KRTAP2-1Q9BYU5 128 aa1.3□□□□□ -2.2
PCDH9-AS4-201ENST00000456459 NDUFB11Q9NX14 153 aa1.3□□□□□ -2.2
PCDH9-AS4-201ENST00000456459 PSENENQ9NZ42 101 aa1.3□□□□□ -2.2
PCDH9-AS4-201ENST00000456459 TPRKBQ9Y3C4 175 aa1.3□□□□□ -2.2
PCDH9-AS4-201ENST00000456459 MDN1Q9NU22 5596 aa1.3□□□□□ -2.2
PCDH9-AS4-201ENST00000456459 UBE2L5PA0A1B0GUS4 154 aa1.29□□□□□ -2.2
PCDH9-AS4-201ENST00000456459 TRDV1A0A1B0GX56 115 aa1.29□□□□□ -2.2
PCDH9-AS4-201ENST00000456459 C20orf202A1L168 122 aa1.29□□□□□ -2.2
PCDH9-AS4-201ENST00000456459 METTL15P1P0C7V9 234 aa1.29□□□□□ -2.2
PCDH9-AS4-201ENST00000456459 SLC25A6P12236 298 aa1.29□□□□□ -2.2
PCDH9-AS4-201ENST00000456459 RNASE3P12724 160 aaKnown RBP1.29□□□□□ -2.2
PCDH9-AS4-201ENST00000456459 ZNF25P17030 456 aaPredicted RBP1.29□□□□□ -2.2
PCDH9-AS4-201ENST00000456459 SAPCD1Q5SSQ6 148 aa1.29□□□□□ -2.2
PCDH9-AS4-201ENST00000456459 SPANXN1Q5VSR9 72 aa1.29□□□□□ -2.2
PCDH9-AS4-201ENST00000456459 STX12Q86Y82 276 aa1.29□□□□□ -2.2
PCDH9-AS4-201ENST00000456459 PYDC1Q8WXC3 89 aa1.29□□□□□ -2.2
PCDH9-AS4-201ENST00000456459 PACRGQ96M98 296 aaPredicted RBP1.29□□□□□ -2.2
PCDH9-AS4-201ENST00000456459 PRRT1Q99946 306 aa1.29□□□□□ -2.2
PCDH9-AS4-201ENST00000456459 GGACTQ9BVM4 153 aa1.29□□□□□ -2.2
PCDH9-AS4-201ENST00000456459 ZNF471Q9BX82 626 aaPredicted RBP1.29□□□□□ -2.2
PCDH9-AS4-201ENST00000456459 OTORQ9NRC9 128 aa1.29□□□□□ -2.2
PCDH9-AS4-201ENST00000456459 BLOC1S6Q9UL45 172 aa1.29□□□□□ -2.2
PCDH9-AS4-201ENST00000456459 ANAPC10Q9UM13 185 aa1.29□□□□□ -2.2
PCDH9-AS4-201ENST00000456459 ALG5Q9Y673 324 aa1.29□□□□□ -2.2
PCDH9-AS4-201ENST00000456459 RAB19A4D1S5 217 aa1.28□□□□□ -2.2
PCDH9-AS4-201ENST00000456459 C9orf92A6NGG3 77 aa1.28□□□□□ -2.2
PCDH9-AS4-201ENST00000456459 HPGDSO60760 199 aa1.28□□□□□ -2.2
PCDH9-AS4-201ENST00000456459 OR5AL1P0C617 328 aa1.28□□□□□ -2.2
PCDH9-AS4-201ENST00000456459 ARMS2P0C7Q2 107 aa1.28□□□□□ -2.2
PCDH9-AS4-201ENST00000456459 FGF7P21781 194 aa1.28□□□□□ -2.2
PCDH9-AS4-201ENST00000456459 BCAP31P51572 246 aa1.28□□□□□ -2.2
PCDH9-AS4-201ENST00000456459 TMBIM6P55061 237 aa1.28□□□□□ -2.2
PCDH9-AS4-201ENST00000456459 NCS1P62166 190 aa1.28□□□□□ -2.2
PCDH9-AS4-201ENST00000456459 RPS29P62273 56 aaKnown RBP1.28□□□□□ -2.2
PCDH9-AS4-201ENST00000456459 HBG1P69891 147 aa1.28□□□□□ -2.2
PCDH9-AS4-201ENST00000456459 HBG2P69892 147 aa1.28□□□□□ -2.2
PCDH9-AS4-201ENST00000456459 TMEM241Q24JQ0 296 aa1.28□□□□□ -2.2
PCDH9-AS4-201ENST00000456459 RNASE13Q5GAN3 156 aaKnown RBP1.28□□□□□ -2.2
PCDH9-AS4-201ENST00000456459 MIC13Q5XKP0 118 aa1.28□□□□□ -2.2
PCDH9-AS4-201ENST00000456459 MRPL55Q7Z7F7 128 aaKnown RBP1.28□□□□□ -2.2
PCDH9-AS4-201ENST00000456459 OR10D4PQ8NGN7 298 aa1.28□□□□□ -2.2
PCDH9-AS4-201ENST00000456459 OR5H6Q8NGV6 325 aa1.28□□□□□ -2.2
PCDH9-AS4-201ENST00000456459 ORAOV1Q8WV07 137 aa1.28□□□□□ -2.2
PCDH9-AS4-201ENST00000456459 MGST2Q99735 147 aa1.28□□□□□ -2.2
PCDH9-AS4-201ENST00000456459 LIMD2Q9BT23 127 aa1.28□□□□□ -2.2
PCDH9-AS4-201ENST00000456459 GNB1LQ9BYB4 327 aa1.28□□□□□ -2.2
PCDH9-AS4-201ENST00000456459 SMDT1Q9H4I9 107 aa1.28□□□□□ -2.2
PCDH9-AS4-201ENST00000456459 GEMIN7Q9H840 131 aaKnown RBP1.28□□□□□ -2.2
PCDH9-AS4-201ENST00000456459 C8orf17Q9NRJ1 99 aa1.28□□□□□ -2.2
PCDH9-AS4-201ENST00000456459 MRPL35Q9NZE8 188 aaKnown RBP1.28□□□□□ -2.2
PCDH9-AS4-201ENST00000456459 SCP2D1Q9UJQ7 156 aa1.28□□□□□ -2.2
PCDH9-AS4-201ENST00000456459 LSM2Q9Y333 95 aaKnown RBP1.28□□□□□ -2.2
PCDH9-AS4-201ENST00000456459 TMSB15BA0A087X1C1 80 aa1.27□□□□□ -2.21
PCDH9-AS4-201ENST00000456459 FABP5P3A8MUU1 101 aa1.27□□□□□ -2.21
PCDH9-AS4-201ENST00000456459 C1orf196B1AJZ1 125 aa1.27□□□□□ -2.21
PCDH9-AS4-201ENST00000456459 C17orf112F2Z3M2 114 aa1.27□□□□□ -2.21
PCDH9-AS4-201ENST00000456459 MT2AP02795 61 aa1.27□□□□□ -2.21
PCDH9-AS4-201ENST00000456459 CD3DP04234 171 aa1.27□□□□□ -2.21
PCDH9-AS4-201ENST00000456459 PVALBP20472 110 aaPredicted RBP1.27□□□□□ -2.21
PCDH9-AS4-201ENST00000456459 NTF3P20783 257 aa1.27□□□□□ -2.21
PCDH9-AS4-201ENST00000456459 SDC2P34741 201 aa1.27□□□□□ -2.21
PCDH9-AS4-201ENST00000456459 NKX2-5P52952 324 aaPredicted RBP1.27□□□□□ -2.21
PCDH9-AS4-201ENST00000456459 TAS2R30P59541 319 aa1.27□□□□□ -2.21
PCDH9-AS4-201ENST00000456459 C3orf22Q8N5N4 141 aa1.27□□□□□ -2.21
PCDH9-AS4-201ENST00000456459 PACRGLQ8N7B6 248 aa1.27□□□□□ -2.21
PCDH9-AS4-201ENST00000456459 MRAP2Q96G30 205 aa1.27□□□□□ -2.21
PCDH9-AS4-201ENST00000456459 C20orf166-AS1Q96NR2 134 aa1.27□□□□□ -2.21
PCDH9-AS4-201ENST00000456459 MCUBQ9NWR8 336 aa1.27□□□□□ -2.21
PCDH9-AS4-201ENST00000456459 GSKIPQ9P0R6 139 aa1.27□□□□□ -2.21
PCDH9-AS4-201ENST00000456459 RSL24D1Q9UHA3 163 aaKnown RBP1.27□□□□□ -2.21
PCDH9-AS4-201ENST00000456459 ARL2-SNX15V9GYD0 113 aa1.27□□□□□ -2.21
PCDH9-AS4-201ENST00000456459 AHNAK2Q8IVF2 5795 aa1.26□□□□□ -2.21
PCDH9-AS4-201ENST00000456459 TRBV30A0A0K0K1B3 111 aa1.26□□□□□ -2.21
PCDH9-AS4-201ENST00000456459 LINC00959A0A1B0GUT2 108 aa1.26□□□□□ -2.21
Retrieved 100 of 20,778 RNA–protein pairs in 50.8 ms