RNA–Protein interactions for RNA: ENST00000456173.6

NEDD4L-208, Transcript of neural precursor cell expressed, developmentally down-regulated 4-like, E3 ubiquitin protein ligase, humanhuman

TSL 1 (best) BASIC

Gene NEDD4L, Length 4,978 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4L-208ENST00000456173 TMEM131Q92545 1883 aa9.06□□□□□ -0.96
NEDD4L-208ENST00000456173 CHCHD10Q8WYQ3 142 aaPredicted RBP9.06□□□□□ -0.96
NEDD4L-208ENST00000456173 C9orf85Q96MD7 179 aa9.06□□□□□ -0.96
NEDD4L-208ENST00000456173 IGHV4-61A0A0C4DH41 118 aa9.06□□□□□ -0.96
NEDD4L-208ENST00000456173 TMEM254Q8TBM7 123 aa9.05□□□□□ -0.96
NEDD4L-208ENST00000456173 NHLRC4P0CG21 123 aaPredicted RBP9.05□□□□□ -0.96
NEDD4L-208ENST00000456173 FHL3Q13643 280 aa9.05□□□□□ -0.96
NEDD4L-208ENST00000456173 A0A096LNI7 61 aa9.05□□□□□ -0.96
NEDD4L-208ENST00000456173 K7EQG2 157 aa9.05□□□□□ -0.96
NEDD4L-208ENST00000456173 APOC4P55056 127 aa9.05□□□□□ -0.96
NEDD4L-208ENST00000456173 NUP210LQ5VU65 1888 aa9.04□□□□□ -0.96
NEDD4L-208ENST00000456173 CHD8Q9HCK8 2581 aa9.04□□□□□ -0.96
NEDD4L-208ENST00000456173 FSTL3O95633 263 aa9.04□□□□□ -0.96
NEDD4L-208ENST00000456173 REG3AQ06141 175 aa9.04□□□□□ -0.96
NEDD4L-208ENST00000456173 LINC00242Q5T6M2 205 aa9.04□□□□□ -0.96
NEDD4L-208ENST00000456173 MYO18BQ8IUG5 2567 aa9.04□□□□□ -0.96
NEDD4L-208ENST00000456173 ESRGQ1W209 222 aa9.04□□□□□ -0.96
NEDD4L-208ENST00000456173 PSMG3-AS1Q96PY0 264 aa9.04□□□□□ -0.96
NEDD4L-208ENST00000456173 MAP6D1Q9H9H5 199 aa9.04□□□□□ -0.96
NEDD4L-208ENST00000456173 UNC80Q8N2C7 3258 aa9.04□□□□□ -0.96
NEDD4L-208ENST00000456173 LTBP2Q14767 1821 aa9.04□□□□□ -0.96
NEDD4L-208ENST00000456173 ODF3BA8MYP8 253 aa9.03□□□□□ -0.96
NEDD4L-208ENST00000456173 Q8N814 137 aa9.03□□□□□ -0.96
NEDD4L-208ENST00000456173 KIAA1549LQ6ZVL6 1849 aa9.03□□□□□ -0.96
NEDD4L-208ENST00000456173 COX6A2Q02221 97 aa9.03□□□□□ -0.96
NEDD4L-208ENST00000456173 PRR3P79522 188 aaKnown RBP9.02□□□□□ -0.96
NEDD4L-208ENST00000456173 A0A087WZ39 114 aa9.02□□□□□ -0.97
NEDD4L-208ENST00000456173 KLLNB2CW77 178 aa9.02□□□□□ -0.97
NEDD4L-208ENST00000456173 SMIM1B2RUZ4 78 aa9.02□□□□□ -0.97
NEDD4L-208ENST00000456173 SBSPONQ8IVN8 264 aa9.02□□□□□ -0.97
NEDD4L-208ENST00000456173 LY6LH3BQJ8 138 aa9.01□□□□□ -0.97
NEDD4L-208ENST00000456173 PLA2G2CQ5R387 149 aa9.01□□□□□ -0.97
NEDD4L-208ENST00000456173 ZNF843Q8N446 348 aa9.01□□□□□ -0.97
NEDD4L-208ENST00000456173 ZNF462Q96JM2 2506 aa9.01□□□□□ -0.97
NEDD4L-208ENST00000456173 HIGD2AQ9BW72 106 aa9.01□□□□□ -0.97
NEDD4L-208ENST00000456173 PRO0255Q9UI72 69 aa9.01□□□□□ -0.97
NEDD4L-208ENST00000456173 TRBV6-8A0A0A6YYG3 113 aa9.01□□□□□ -0.97
NEDD4L-208ENST00000456173 DEFB121Q5J5C9 76 aa9.01□□□□□ -0.97
NEDD4L-208ENST00000456173 PRRC2AP48634 2157 aaKnown RBP9□□□□□ -0.97
NEDD4L-208ENST00000456173 SONP18583 2426 aaKnown RBP9□□□□□ -0.97
NEDD4L-208ENST00000456173 FAM19A4Q96LR4 140 aa9□□□□□ -0.97
NEDD4L-208ENST00000456173 LINC00208Q96KT6 92 aa9□□□□□ -0.97
NEDD4L-208ENST00000456173 TRBV6-4A0A1B0GX49 114 aa9□□□□□ -0.97
NEDD4L-208ENST00000456173 BEAN1Q3B7T3 259 aa8.99□□□□□ -0.97
NEDD4L-208ENST00000456173 IGFL2Q6UWQ7 119 aa8.99□□□□□ -0.97
NEDD4L-208ENST00000456173 EXPH5Q8NEV8 1989 aa8.99□□□□□ -0.97
NEDD4L-208ENST00000456173 Q6ZVQ6 151 aa8.99□□□□□ -0.97
NEDD4L-208ENST00000456173 MYO9AB2RTY4 2548 aa8.98□□□□□ -0.97
NEDD4L-208ENST00000456173 LINC01547P58512 204 aaPredicted RBP8.98□□□□□ -0.97
NEDD4L-208ENST00000456173 LOC100131303A0A0U1RQF7 123 aa8.98□□□□□ -0.97
NEDD4L-208ENST00000456173 WFDC10AQ9H1F0 79 aa8.98□□□□□ -0.97
NEDD4L-208ENST00000456173 TLN1Q9Y490 2541 aaKnown RBP8.98□□□□□ -0.97
NEDD4L-208ENST00000456173 CDC42SE2Q9NRR3 84 aa8.97□□□□□ -0.97
NEDD4L-208ENST00000456173 IGKV2-28A0A075B6P5 120 aa8.97□□□□□ -0.97
NEDD4L-208ENST00000456173 DNAJC9-AS1A6NH13 148 aa8.97□□□□□ -0.97
NEDD4L-208ENST00000456173 IGKV2D-28P01615 120 aa8.97□□□□□ -0.97
NEDD4L-208ENST00000456173 SPART-AS1P0CW21 52 aa8.97□□□□□ -0.97
NEDD4L-208ENST00000456173 Q8N6K4 173 aa8.97□□□□□ -0.97
NEDD4L-208ENST00000456173 COX8CQ7Z4L0 72 aa8.96□□□□□ -0.97
NEDD4L-208ENST00000456173 Q8N2B8 174 aa8.96□□□□□ -0.97
NEDD4L-208ENST00000456173 AMELXQ99217 191 aa8.96□□□□□ -0.97
NEDD4L-208ENST00000456173 LINC00959A0A1B0GUT2 108 aa8.96□□□□□ -0.98
NEDD4L-208ENST00000456173 A0A1W2PNU3 283 aaPredicted RBP8.95□□□□□ -0.98
NEDD4L-208ENST00000456173 ZNF73O43830 326 aaPredicted RBP8.95□□□□□ -0.98
NEDD4L-208ENST00000456173 DEFB135Q30KP9 77 aa8.95□□□□□ -0.98
NEDD4L-208ENST00000456173 A6NDX4 124 aa8.95□□□□□ -0.98
NEDD4L-208ENST00000456173 Q8N9L7 120 aa8.95□□□□□ -0.98
NEDD4L-208ENST00000456173 CHCHD7Q9BUK0 85 aa8.95□□□□□ -0.98
NEDD4L-208ENST00000456173 LINC00337Q8N6G1 96 aa8.95□□□□□ -0.98
NEDD4L-208ENST00000456173 ANKRD11Q6UB99 2663 aaPredicted RBP8.95□□□□□ -0.98
NEDD4L-208ENST00000456173 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP8.94□□□□□ -0.98
NEDD4L-208ENST00000456173 Q96MF0 132 aa8.94□□□□□ -0.98
NEDD4L-208ENST00000456173 CDH23Q9H251 3354 aa8.94□□□□□ -0.98
NEDD4L-208ENST00000456173 FHL2Q14192 279 aa8.94□□□□□ -0.98
NEDD4L-208ENST00000456173 K7ENP7 123 aa8.93□□□□□ -0.98
NEDD4L-208ENST00000456173 C9orf116Q5BN46 136 aaPredicted RBP8.93□□□□□ -0.98
NEDD4L-208ENST00000456173 C10orf99Q6UWK7 81 aa8.93□□□□□ -0.98
NEDD4L-208ENST00000456173 LINC00336Q6ZUF6 198 aa8.93□□□□□ -0.98
NEDD4L-208ENST00000456173 LINC01546A6NGU7 62 aa8.92□□□□□ -0.98
NEDD4L-208ENST00000456173 IGHV4-30-4P0DP06 118 aa8.92□□□□□ -0.98
NEDD4L-208ENST00000456173 IGHV4-31P0DP07 118 aa8.92□□□□□ -0.98
NEDD4L-208ENST00000456173 IGKV2-24A0A0C4DH68 120 aa8.92□□□□□ -0.98
NEDD4L-208ENST00000456173 CASC2Q6XLA1 102 aa8.92□□□□□ -0.98
NEDD4L-208ENST00000456173 CHD9Q3L8U1 2897 aa8.92□□□□□ -0.98
NEDD4L-208ENST00000456173 A8MTW9 85 aa8.91□□□□□ -0.98
NEDD4L-208ENST00000456173 SMCR5Q8TEV8 140 aa8.91□□□□□ -0.98
NEDD4L-208ENST00000456173 FAM218AQ96MZ4 157 aa8.91□□□□□ -0.98
NEDD4L-208ENST00000456173 LINC00575Q6W349 94 aa8.91□□□□□ -0.98
NEDD4L-208ENST00000456173 CD164L2Q6UWJ8 174 aa8.91□□□□□ -0.98
NEDD4L-208ENST00000456173 PTPRSQ13332 1948 aa8.91□□□□□ -0.98
NEDD4L-208ENST00000456173 Q9UF83 564 aa8.91□□□□□ -0.98
NEDD4L-208ENST00000456173 TRBV10-3A0A0K0K1G6 114 aa8.9□□□□□ -0.98
NEDD4L-208ENST00000456173 TMEM89A2RUT3 159 aa8.9□□□□□ -0.98
NEDD4L-208ENST00000456173 PIP4P1Q86T03 277 aa8.9□□□□□ -0.99
NEDD4L-208ENST00000456173 ZFYVE26Q68DK2 2539 aa8.9□□□□□ -0.99
NEDD4L-208ENST00000456173 EDN2P20800 178 aa8.9□□□□□ -0.99
NEDD4L-208ENST00000456173 F8W735 103 aaPredicted RBP8.89□□□□□ -0.99
NEDD4L-208ENST00000456173 DOPEY1Q5JWR5 2465 aa8.89□□□□□ -0.99
NEDD4L-208ENST00000456173 Q8IZM0 81 aa8.89□□□□□ -0.99
NEDD4L-208ENST00000456173 CCDC168Q8NDH2 2452 aa8.89□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 64.5 ms