RNA–Protein interactions for RNA: ENST00000456133.5

EPCAM-204, Transcript of epithelial cell adhesion molecule, humanhuman

TSL 5

Gene EPCAM, Length 1,501 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPCAM-204ENST00000456133 TIMM21Q9BVV7 248 aa7.83□□□□□ -1.16
EPCAM-204ENST00000456133 C9orf129Q5T035 196 aaKnown RBP7.83□□□□□ -1.16
EPCAM-204ENST00000456133 TYMSOSQ8TAI1 123 aa7.83□□□□□ -1.16
EPCAM-204ENST00000456133 RETNLBQ9BQ08 111 aa7.83□□□□□ -1.16
EPCAM-204ENST00000456133 A0A1B0GUT8 65 aa7.82□□□□□ -1.16
EPCAM-204ENST00000456133 FAM231DQ6ZW35 169 aa7.82□□□□□ -1.16
EPCAM-204ENST00000456133 NRACQ8N912 160 aa7.82□□□□□ -1.16
EPCAM-204ENST00000456133 FAM104AQ969W3 186 aa7.82□□□□□ -1.16
EPCAM-204ENST00000456133 KIR2DL4Q99706 377 aa7.82□□□□□ -1.16
EPCAM-204ENST00000456133 hCG_2014768A0A024R1R8 64 aa7.81□□□□□ -1.16
EPCAM-204ENST00000456133 SUMO2P61956 95 aaKnown RBP7.81□□□□□ -1.16
EPCAM-204ENST00000456133 KIAA0087Q14695 138 aa7.81□□□□□ -1.16
EPCAM-204ENST00000456133 TMEM18Q96B42 140 aa7.81□□□□□ -1.16
EPCAM-204ENST00000456133 CDIP1Q9H305 208 aa7.81□□□□□ -1.16
EPCAM-204ENST00000456133 RPL39P62891 51 aaKnown RBP7.8□□□□□ -1.16
EPCAM-204ENST00000456133 HIGD1CA8MV81 97 aa7.79□□□□□ -1.16
EPCAM-204ENST00000456133 NDUFC2-KCTD14E9PQ53 114 aa7.79□□□□□ -1.16
EPCAM-204ENST00000456133 NUPR1O60356 82 aa7.79□□□□□ -1.16
EPCAM-204ENST00000456133 CRYGAP11844 174 aa7.79□□□□□ -1.16
EPCAM-204ENST00000456133 CT83Q5H943 113 aa7.79□□□□□ -1.16
EPCAM-204ENST00000456133 CTDSP1Q9GZU7 261 aa7.79□□□□□ -1.16
EPCAM-204ENST00000456133 TRBV30A0A0K0K1B3 111 aa7.78□□□□□ -1.16
EPCAM-204ENST00000456133 TAGLN2P37802 199 aaKnown RBP7.78□□□□□ -1.16
EPCAM-204ENST00000456133 C2orf82Q6UX34 121 aa7.78□□□□□ -1.16
EPCAM-204ENST00000456133 IFITM10A6NMD0 228 aa7.78□□□□□ -1.16
EPCAM-204ENST00000456133 PPP1R17O96001 155 aa7.78□□□□□ -1.16
EPCAM-204ENST00000456133 PPP1R2P9O14990 202 aa7.77□□□□□ -1.17
EPCAM-204ENST00000456133 TPRXLQ17RH7 258 aa7.77□□□□□ -1.17
EPCAM-204ENST00000456133 PACRGQ96M98 296 aaPredicted RBP7.77□□□□□ -1.17
EPCAM-204ENST00000456133 ANAPC11Q9NYG5 84 aa7.77□□□□□ -1.17
EPCAM-204ENST00000456133 C22orf24Q9Y442 160 aa7.77□□□□□ -1.17
EPCAM-204ENST00000456133 TGIF2-C20orf24A0A0A6YYL0 155 aa7.76□□□□□ -1.17
EPCAM-204ENST00000456133 HBBP68871 147 aa7.76□□□□□ -1.17
EPCAM-204ENST00000456133 MRPS36P82909 103 aaKnown RBP7.76□□□□□ -1.17
EPCAM-204ENST00000456133 CRCT1Q9UGL9 99 aa7.76□□□□□ -1.17
EPCAM-204ENST00000456133 IGLV7-46A0A075B6I9 117 aa7.75□□□□□ -1.17
EPCAM-204ENST00000456133 RPL28P46779 137 aaKnown RBP7.75□□□□□ -1.17
EPCAM-204ENST00000456133 RIGQ13278 110 aa7.75□□□□□ -1.17
EPCAM-204ENST00000456133 KRTAP13-2Q52LG2 175 aa7.75□□□□□ -1.17
EPCAM-204ENST00000456133 LINC00469Q8N7U9 141 aa7.75□□□□□ -1.17
EPCAM-204ENST00000456133 SPANXA1Q9NS26 97 aa7.75□□□□□ -1.17
EPCAM-204ENST00000456133 MRPL51Q4U2R6 128 aaKnown RBP7.74□□□□□ -1.17
EPCAM-204ENST00000456133 LBHQ53QV2 105 aaPredicted RBP7.74□□□□□ -1.17
EPCAM-204ENST00000456133 TMEM250H0YL14 139 aa7.73□□□□□ -1.17
EPCAM-204ENST00000456133 CEBPGP53567 150 aa7.73□□□□□ -1.17
EPCAM-204ENST00000456133 C20orf78Q9BR46 151 aa7.73□□□□□ -1.17
EPCAM-204ENST00000456133 BCE1O60756 84 aa7.73□□□□□ -1.17
EPCAM-204ENST00000456133 LINC00242Q5T6M2 205 aa7.73□□□□□ -1.17
EPCAM-204ENST00000456133 LINC00173Q6ZV60 143 aa7.73□□□□□ -1.17
EPCAM-204ENST00000456133 LINC00304Q8N9R0 145 aa7.73□□□□□ -1.17
EPCAM-204ENST00000456133 XAGE1AQ9HD64 81 aa7.73□□□□□ -1.17
EPCAM-204ENST00000456133 ZNF727A8MUV8 499 aa7.72□□□□□ -1.17
EPCAM-204ENST00000456133 TCAPO15273 167 aa7.72□□□□□ -1.17
EPCAM-204ENST00000456133 RPL32P62910 135 aaKnown RBP7.72□□□□□ -1.17
EPCAM-204ENST00000456133 FAM104BQ5XKR9 115 aa7.72□□□□□ -1.17
EPCAM-204ENST00000456133 TRBV24-1A0A075B6N3 115 aa7.71□□□□□ -1.18
EPCAM-204ENST00000456133 SMIM2Q9BVW6 85 aa7.71□□□□□ -1.18
EPCAM-204ENST00000456133 OSTCQ9NRP0 149 aa7.71□□□□□ -1.18
EPCAM-204ENST00000456133 TNFRSF6BO95407 300 aa7.7□□□□□ -1.18
EPCAM-204ENST00000456133 CKS2P33552 79 aa7.7□□□□□ -1.18
EPCAM-204ENST00000456133 MRPL55Q7Z7F7 128 aaKnown RBP7.7□□□□□ -1.18
EPCAM-204ENST00000456133 LINC01551Q86U37 167 aa7.7□□□□□ -1.18
EPCAM-204ENST00000456133 AKAP14Q86UN6 197 aa7.7□□□□□ -1.18
EPCAM-204ENST00000456133 LINC00862A6NCI5 91 aa7.69□□□□□ -1.18
EPCAM-204ENST00000456133 LINC01547P58512 204 aaPredicted RBP7.69□□□□□ -1.18
EPCAM-204ENST00000456133 TOMM7Q9P0U1 55 aa7.69□□□□□ -1.18
EPCAM-204ENST00000456133 TP73-AS1Q9UF72 201 aa7.69□□□□□ -1.18
EPCAM-204ENST00000456133 V9GYV3 84 aa7.69□□□□□ -1.18
EPCAM-204ENST00000456133 SMIM7Q9BQ49 75 aa7.68□□□□□ -1.18
EPCAM-204ENST00000456133 FSIP2Q5CZC0 6907 aa7.68□□□□□ -1.18
EPCAM-204ENST00000456133 IGLV4-3A0A075B6K6 122 aa7.68□□□□□ -1.18
EPCAM-204ENST00000456133 RPL37AP8A6NKH3 93 aa7.68□□□□□ -1.18
EPCAM-204ENST00000456133 PRSS2P07478 247 aa7.68□□□□□ -1.18
EPCAM-204ENST00000456133 IFI27P40305 119 aaPredicted RBP7.68□□□□□ -1.18
EPCAM-204ENST00000456133 CKS1BP61024 79 aa7.68□□□□□ -1.18
EPCAM-204ENST00000456133 LINC01561Q8N1V8 128 aa7.68□□□□□ -1.18
EPCAM-204ENST00000456133 PPDPFQ9H3Y8 114 aa7.68□□□□□ -1.18
EPCAM-204ENST00000456133 FAM229BQ4G0N7 80 aa7.67□□□□□ -1.18
EPCAM-204ENST00000456133 SLC51BQ86UW2 128 aa7.67□□□□□ -1.18
EPCAM-204ENST00000456133 LINC00167Q96N53 147 aa7.67□□□□□ -1.18
EPCAM-204ENST00000456133 NPYP01303 97 aa7.66□□□□□ -1.18
EPCAM-204ENST00000456133 C6orf226Q5I0X4 101 aa7.66□□□□□ -1.18
EPCAM-204ENST00000456133 NAT8BQ9UHF3 227 aa7.66□□□□□ -1.18
EPCAM-204ENST00000456133 IGKV2D-26A0A0A0MRZ7 120 aa7.65□□□□□ -1.18
EPCAM-204ENST00000456133 D6R8Y8 96 aa7.65□□□□□ -1.18
EPCAM-204ENST00000456133 ZC2HC1BQ5TFG8 222 aa7.65□□□□□ -1.18
EPCAM-204ENST00000456133 Q6ZN92 141 aa7.65□□□□□ -1.18
EPCAM-204ENST00000456133 KRTAP13-1Q8IUC0 172 aa7.65□□□□□ -1.18
EPCAM-204ENST00000456133 TMEM141Q96I45 108 aa7.65□□□□□ -1.18
EPCAM-204ENST00000456133 PYGO1Q9Y3Y4 419 aa7.65□□□□□ -1.18
EPCAM-204ENST00000456133 GAGE10A6NGK3 116 aa7.64□□□□□ -1.19
EPCAM-204ENST00000456133 UBE2AP49459 152 aa7.64□□□□□ -1.19
EPCAM-204ENST00000456133 FAM74A3Q4VXF1 159 aa7.64□□□□□ -1.19
EPCAM-204ENST00000456133 EIF5A2Q9GZV4 153 aaKnown RBP7.64□□□□□ -1.19
EPCAM-204ENST00000456133 TEX43Q6ZNM6 134 aa7.63□□□□□ -1.19
EPCAM-204ENST00000456133 Q8IZM0 81 aa7.63□□□□□ -1.19
EPCAM-204ENST00000456133 ALKBH7Q9BT30 221 aaPredicted RBP7.63□□□□□ -1.19
EPCAM-204ENST00000456133 RAB5AP20339 215 aa7.62□□□□□ -1.19
EPCAM-204ENST00000456133 CTAG1AP78358 180 aa7.62□□□□□ -1.19
EPCAM-204ENST00000456133 KRTAP4-1Q9BYQ7 146 aa7.62□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 178 ms