RNA–Protein interactions for RNA: ENST00000447873.5

SGCE-207, Transcript of sarcoglycan epsilon, humanhuman

TSL 1 (best) BASIC

Gene SGCE, Length 1,597 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCE-207ENST00000447873 COX6A2Q02221 97 aa13.11□□□□□ -0.31
SGCE-207ENST00000447873 NFE4Q86UQ8 179 aa13.11□□□□□ -0.31
SGCE-207ENST00000447873 C1orf43Q9BWL3 253 aa13.11□□□□□ -0.31
SGCE-207ENST00000447873 PYY3Q5JQD4 70 aa13.1□□□□□ -0.31
SGCE-207ENST00000447873 ATOH7Q8N100 152 aa13.1□□□□□ -0.31
SGCE-207ENST00000447873 LINC00469Q8N7U9 141 aa13.1□□□□□ -0.31
SGCE-207ENST00000447873 IGKV2D-24A0A075B6R9 120 aa13.09□□□□□ -0.31
SGCE-207ENST00000447873 M0R2N4 97 aa13.09□□□□□ -0.31
SGCE-207ENST00000447873 TMEM170BQ5T4T1 132 aa13.09□□□□□ -0.31
SGCE-207ENST00000447873 CD164L2Q6UWJ8 174 aa13.09□□□□□ -0.31
SGCE-207ENST00000447873 RMI2Q96E14 147 aa13.08□□□□□ -0.32
SGCE-207ENST00000447873 GAGE12HA6NDE8 117 aa13.07□□□□□ -0.32
SGCE-207ENST00000447873 ZNF22P17026 224 aaPredicted RBP13.07□□□□□ -0.32
SGCE-207ENST00000447873 CDKN2A-AS1Q9UH64 79 aa13.07□□□□□ -0.32
SGCE-207ENST00000447873 IGLV5-45A0A087WSX0 123 aa13.07□□□□□ -0.32
SGCE-207ENST00000447873 IGHV3OR16-9A0A0B4J2B5 98 aa13.07□□□□□ -0.32
SGCE-207ENST00000447873 H3BRM9 83 aa13.06□□□□□ -0.32
SGCE-207ENST00000447873 FOXI1Q12951 378 aa13.05□□□□□ -0.32
SGCE-207ENST00000447873 C5orf38Q86SI9 138 aa13.05□□□□□ -0.32
SGCE-207ENST00000447873 Q6ZR54 194 aa13.04□□□□□ -0.32
SGCE-207ENST00000447873 COX11Q9Y6N1 276 aa13.04□□□□□ -0.32
SGCE-207ENST00000447873 KMT2AQ03164 3969 aa13.03□□□□□ -0.32
SGCE-207ENST00000447873 COX7A2LO14548 114 aa13.03□□□□□ -0.32
SGCE-207ENST00000447873 KRTAP26-1Q6PEX3 210 aa13.03□□□□□ -0.32
SGCE-207ENST00000447873 TM2D2Q9BX73 214 aa13.03□□□□□ -0.32
SGCE-207ENST00000447873 DNAH6Q9C0G6 4158 aa13.03□□□□□ -0.32
SGCE-207ENST00000447873 A0A087WZ39 114 aa13.03□□□□□ -0.32
SGCE-207ENST00000447873 STPG4Q8N801 248 aa13.03□□□□□ -0.32
SGCE-207ENST00000447873 hDV102S1A0JD36 115 aa13.02□□□□□ -0.33
SGCE-207ENST00000447873 TMEM223A0PJW6 202 aa13.01□□□□□ -0.33
SGCE-207ENST00000447873 HSBP1L1C9JCN9 74 aa13.01□□□□□ -0.33
SGCE-207ENST00000447873 SPINK8P0C7L1 97 aa13.01□□□□□ -0.33
SGCE-207ENST00000447873 SMIM6P0DI80 62 aa13.01□□□□□ -0.33
SGCE-207ENST00000447873 MALP21145 153 aa13.01□□□□□ -0.33
SGCE-207ENST00000447873 HERVK_113P61574 105 aa13.01□□□□□ -0.33
SGCE-207ENST00000447873 LCE6AA0A183 80 aa13□□□□□ -0.33
SGCE-207ENST00000447873 MAJINQ3KP22 176 aa13□□□□□ -0.33
SGCE-207ENST00000447873 CDPF1Q6NVV7 123 aa12.99□□□□□ -0.33
SGCE-207ENST00000447873 IGHV3-64A0A075B6Q5 118 aa12.98□□□□□ -0.33
SGCE-207ENST00000447873 PSCAO43653 123 aa12.98□□□□□ -0.33
SGCE-207ENST00000447873 LINC01561Q8N1V8 128 aa12.98□□□□□ -0.33
SGCE-207ENST00000447873 SMIM1B2RUZ4 78 aa12.98□□□□□ -0.33
SGCE-207ENST00000447873 C6orf223Q8N319 242 aa12.98□□□□□ -0.33
SGCE-207ENST00000447873 VAMP8Q9BV40 100 aa12.98□□□□□ -0.33
SGCE-207ENST00000447873 APOMO95445 188 aa12.97□□□□□ -0.33
SGCE-207ENST00000447873 IGHV1-58A0A0C4DH39 117 aa12.96□□□□□ -0.33
SGCE-207ENST00000447873 MAPKAPK5-AS1Q8N8E1 139 aa12.96□□□□□ -0.33
SGCE-207ENST00000447873 PAM16Q9Y3D7 125 aa12.96□□□□□ -0.33
SGCE-207ENST00000447873 E9PLD3 99 aa12.95□□□□□ -0.34
SGCE-207ENST00000447873 S100A12P80511 92 aa12.95□□□□□ -0.34
SGCE-207ENST00000447873 ANKRD39Q53RE8 183 aa12.95□□□□□ -0.34
SGCE-207ENST00000447873 C1orf134Q5TEV5 83 aa12.95□□□□□ -0.34
SGCE-207ENST00000447873 IGLV5-39A0A0G2JS06 123 aa12.94□□□□□ -0.34
SGCE-207ENST00000447873 DNAH10Q8IVF4 4471 aa12.94□□□□□ -0.34
SGCE-207ENST00000447873 Q6ZRN7 208 aaPredicted RBP12.94□□□□□ -0.34
SGCE-207ENST00000447873 ORAOV1Q8WV07 137 aa12.94□□□□□ -0.34
SGCE-207ENST00000447873 TOMM7Q9P0U1 55 aa12.94□□□□□ -0.34
SGCE-207ENST00000447873 CFAP161Q6P656 301 aa12.93□□□□□ -0.34
SGCE-207ENST00000447873 HYDINQ4G0P3 5121 aa12.93□□□□□ -0.34
SGCE-207ENST00000447873 SACSQ9NZJ4 4579 aa12.92□□□□□ -0.34
SGCE-207ENST00000447873 LEPROTO15243 131 aa12.92□□□□□ -0.34
SGCE-207ENST00000447873 NMUP48645 174 aa12.92□□□□□ -0.34
SGCE-207ENST00000447873 SPATA45Q537H7 98 aa12.92□□□□□ -0.34
SGCE-207ENST00000447873 PLEKHB2Q96CS7 222 aa12.92□□□□□ -0.34
SGCE-207ENST00000447873 DNAH2Q9P225 4427 aa12.92□□□□□ -0.34
SGCE-207ENST00000447873 IGKV2D-26A0A0A0MRZ7 120 aa12.91□□□□□ -0.34
SGCE-207ENST00000447873 C12orf57Q99622 126 aa12.91□□□□□ -0.34
SGCE-207ENST00000447873 USP17L23D6RBM5 183 aa12.9□□□□□ -0.34
SGCE-207ENST00000447873 PRSS2P07478 247 aa12.9□□□□□ -0.34
SGCE-207ENST00000447873 C15orf56Q8N910 161 aa12.9□□□□□ -0.34
SGCE-207ENST00000447873 COX7B2Q8TF08 81 aa12.9□□□□□ -0.34
SGCE-207ENST00000447873 J3QQQ9 107 aa12.9□□□□□ -0.35
SGCE-207ENST00000447873 LECT2O14960 151 aa12.89□□□□□ -0.35
SGCE-207ENST00000447873 LGALS3P17931 250 aaKnown RBP12.89□□□□□ -0.35
SGCE-207ENST00000447873 TSPEAR-AS2P59090 65 aa12.89□□□□□ -0.35
SGCE-207ENST00000447873 SPAG11BQ08648 103 aa12.89□□□□□ -0.35
SGCE-207ENST00000447873 HIGD2BQ4VC39 106 aa12.89□□□□□ -0.35
SGCE-207ENST00000447873 C6orf226Q5I0X4 101 aa12.89□□□□□ -0.35
SGCE-207ENST00000447873 Q8IZM0 81 aa12.89□□□□□ -0.35
SGCE-207ENST00000447873 ZNF561-AS1K7EIQ3 104 aa12.88□□□□□ -0.35
SGCE-207ENST00000447873 LINC00518Q8N0U6 118 aa12.88□□□□□ -0.35
SGCE-207ENST00000447873 GVQW2A0A096LPI5 108 aaPredicted RBP12.86□□□□□ -0.35
SGCE-207ENST00000447873 KIAA0087Q14695 138 aa12.86□□□□□ -0.35
SGCE-207ENST00000447873 LINC00526Q96FQ7 95 aa12.86□□□□□ -0.35
SGCE-207ENST00000447873 CKS1BP61024 79 aa12.85□□□□□ -0.35
SGCE-207ENST00000447873 WFDC2Q14508 124 aa12.85□□□□□ -0.35
SGCE-207ENST00000447873 PCP2Q8IVA1 136 aa12.85□□□□□ -0.35
SGCE-207ENST00000447873 TTTY13Q9BZ97 58 aa12.85□□□□□ -0.35
SGCE-207ENST00000447873 LRCOL1A6NCL2 159 aa12.84□□□□□ -0.35
SGCE-207ENST00000447873 NDUFA12Q9UI09 145 aa12.84□□□□□ -0.35
SGCE-207ENST00000447873 C14orf177Q52M58 125 aa12.83□□□□□ -0.36
SGCE-207ENST00000447873 C14orf144Q96I85 54 aa12.83□□□□□ -0.36
SGCE-207ENST00000447873 ZNF815PA8K554 130 aa12.82□□□□□ -0.36
SGCE-207ENST00000447873 COX8AP10176 69 aa12.82□□□□□ -0.36
SGCE-207ENST00000447873 CXCL5P42830 114 aa12.82□□□□□ -0.36
SGCE-207ENST00000447873 C2orf82Q6UX34 121 aa12.82□□□□□ -0.36
SGCE-207ENST00000447873 NTN5Q8WTR8 489 aaPredicted RBP12.82□□□□□ -0.36
SGCE-207ENST00000447873 MYMXA0A1B0GTQ4 84 aa12.81□□□□□ -0.36
SGCE-207ENST00000447873 NDUFA1O15239 70 aa12.81□□□□□ -0.36
SGCE-207ENST00000447873 CAMK2N2Q96S95 79 aa12.81□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 49.9 ms