RNA–Protein interactions for RNA: ENST00000447419.6

PTX4-203, Transcript of pentraxin 4, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene PTX4, Length 1,516 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTX4-203ENST00000447419 FA2HQ7L5A8 372 aa13.18□□□□□ -0.3
PTX4-203ENST00000447419 EPM2AB3EWF7 344 aa13.18□□□□□ -0.3
PTX4-203ENST00000447419 K7EMI3 77 aa13.18□□□□□ -0.3
PTX4-203ENST00000447419 CHTF8P0CG12 524 aa13.18□□□□□ -0.3
PTX4-203ENST00000447419 COX6A2Q02221 97 aa13.18□□□□□ -0.3
PTX4-203ENST00000447419 Q5VSD8 79 aa13.18□□□□□ -0.3
PTX4-203ENST00000447419 LINC00173Q6ZV60 143 aa13.18□□□□□ -0.3
PTX4-203ENST00000447419 CIRBP-AS1Q8TBR5 109 aa13.18□□□□□ -0.3
PTX4-203ENST00000447419 CHAC1Q9BUX1 264 aa13.18□□□□□ -0.3
PTX4-203ENST00000447419 IGHV3-64A0A075B6Q5 118 aa13.17□□□□□ -0.3
PTX4-203ENST00000447419 ZNF561-AS1K7EIQ3 104 aa13.17□□□□□ -0.3
PTX4-203ENST00000447419 Q6ZN92 141 aa13.17□□□□□ -0.3
PTX4-203ENST00000447419 TOMM6Q96B49 74 aa13.17□□□□□ -0.3
PTX4-203ENST00000447419 SMCO4Q9NRQ5 59 aa13.17□□□□□ -0.3
PTX4-203ENST00000447419 IGLV4-69A0A075B6H9 119 aa13.16□□□□□ -0.3
PTX4-203ENST00000447419 C18orf32Q8TCD1 76 aa13.16□□□□□ -0.3
PTX4-203ENST00000447419 VCX2Q9H322 139 aa13.16□□□□□ -0.3
PTX4-203ENST00000447419 LINC00242Q5T6M2 205 aa13.15□□□□□ -0.3
PTX4-203ENST00000447419 SCGB3A1Q96QR1 104 aa13.15□□□□□ -0.3
PTX4-203ENST00000447419 IGHV3OR16-9A0A0B4J2B5 98 aa13.14□□□□□ -0.31
PTX4-203ENST00000447419 UBE2D1P51668 147 aa13.14□□□□□ -0.31
PTX4-203ENST00000447419 URB1-AS1Q96HZ7 61 aa13.14□□□□□ -0.31
PTX4-203ENST00000447419 C2orf88Q9BSF0 95 aa13.14□□□□□ -0.31
PTX4-203ENST00000447419 PMCHL1Q16048 86 aa13.13□□□□□ -0.31
PTX4-203ENST00000447419 AMELXQ99217 191 aa13.13□□□□□ -0.31
PTX4-203ENST00000447419 LINC01546A6NGU7 62 aa13.13□□□□□ -0.31
PTX4-203ENST00000447419 DPH3Q96FX2 82 aa13.13□□□□□ -0.31
PTX4-203ENST00000447419 CARD19Q96LW7 228 aa13.13□□□□□ -0.31
PTX4-203ENST00000447419 IGKV2-24A0A0C4DH68 120 aa13.12□□□□□ -0.31
PTX4-203ENST00000447419 SPAG11BQ08648 103 aa13.12□□□□□ -0.31
PTX4-203ENST00000447419 ORAOV1Q8WV07 137 aa13.12□□□□□ -0.31
PTX4-203ENST00000447419 SYCNQ0VAF6 134 aa13.11□□□□□ -0.31
PTX4-203ENST00000447419 Q6ZRU5 148 aa13.11□□□□□ -0.31
PTX4-203ENST00000447419 LINC00528Q8N1L1 170 aa13.11□□□□□ -0.31
PTX4-203ENST00000447419 TIMM17AQ99595 171 aa13.11□□□□□ -0.31
PTX4-203ENST00000447419 APOMO95445 188 aa13.1□□□□□ -0.31
PTX4-203ENST00000447419 G0S2P27469 103 aa13.1□□□□□ -0.31
PTX4-203ENST00000447419 ERASQ7Z444 233 aa13.1□□□□□ -0.31
PTX4-203ENST00000447419 CAMK2N2Q96S95 79 aa13.1□□□□□ -0.31
PTX4-203ENST00000447419 FAM229AH3BQW9 127 aa13.09□□□□□ -0.31
PTX4-203ENST00000447419 LINC00614P0C842 121 aa13.09□□□□□ -0.31
PTX4-203ENST00000447419 A0A0J9YXV3 536 aa13.08□□□□□ -0.31
PTX4-203ENST00000447419 A0A096LNJ9 63 aa13.08□□□□□ -0.32
PTX4-203ENST00000447419 SCO1O75880 301 aa13.08□□□□□ -0.32
PTX4-203ENST00000447419 A0A096LNI7 61 aa13.07□□□□□ -0.32
PTX4-203ENST00000447419 A0A087WZ39 114 aa13.06□□□□□ -0.32
PTX4-203ENST00000447419 TRGC2P03986 189 aa13.06□□□□□ -0.32
PTX4-203ENST00000447419 MAJINQ3KP22 176 aa13.06□□□□□ -0.32
PTX4-203ENST00000447419 PAPPA-AS1Q5QFB9 102 aa13.06□□□□□ -0.32
PTX4-203ENST00000447419 NPSP0C0P6 89 aa13.05□□□□□ -0.32
PTX4-203ENST00000447419 OR10D4PQ8NGN7 298 aa13.05□□□□□ -0.32
PTX4-203ENST00000447419 SPACA4Q8TDM5 124 aa13.05□□□□□ -0.32
PTX4-203ENST00000447419 A0A087WYN8 130 aa13.04□□□□□ -0.32
PTX4-203ENST00000447419 C10orf25Q5T742 122 aa13.04□□□□□ -0.32
PTX4-203ENST00000447419 NDUFA6P56556 154 aa13.03□□□□□ -0.32
PTX4-203ENST00000447419 GEMIN7Q9H840 131 aaKnown RBP13.03□□□□□ -0.32
PTX4-203ENST00000447419 CDKN2A-AS1Q9UH64 79 aa13.03□□□□□ -0.32
PTX4-203ENST00000447419 CIRBPQ14011 172 aaKnown RBP13.03□□□□□ -0.32
PTX4-203ENST00000447419 UNQ6190/PRO20217Q6UXQ8 127 aa13.03□□□□□ -0.32
PTX4-203ENST00000447419 C2orf48Q96LS8 159 aa13.03□□□□□ -0.32
PTX4-203ENST00000447419 CST9LQ9H4G1 147 aa13.03□□□□□ -0.32
PTX4-203ENST00000447419 TOMM7Q9P0U1 55 aa13.03□□□□□ -0.32
PTX4-203ENST00000447419 SRRM2Q9UQ35 2752 aaKnown RBP13.02□□□□□ -0.32
PTX4-203ENST00000447419 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP13.02□□□□□ -0.33
PTX4-203ENST00000447419 HBDP02042 147 aa13.02□□□□□ -0.33
PTX4-203ENST00000447419 GAGE2BQ13066 116 aa13.02□□□□□ -0.33
PTX4-203ENST00000447419 C2orf82Q6UX34 121 aa13.02□□□□□ -0.33
PTX4-203ENST00000447419 COLCA2A8K830 154 aa13.01□□□□□ -0.33
PTX4-203ENST00000447419 INAFM2P0DMQ5 153 aa13.01□□□□□ -0.33
PTX4-203ENST00000447419 RAB5BP61020 215 aa13.01□□□□□ -0.33
PTX4-203ENST00000447419 LINC00469Q8N7U9 141 aa13.01□□□□□ -0.33
PTX4-203ENST00000447419 VPS13BQ7Z7G8 4022 aa13□□□□□ -0.33
PTX4-203ENST00000447419 HERVK_113P63121 156 aa13□□□□□ -0.33
PTX4-203ENST00000447419 RPL18AQ02543 176 aaKnown RBP13□□□□□ -0.33
PTX4-203ENST00000447419 KIAA0087Q14695 138 aa13□□□□□ -0.33
PTX4-203ENST00000447419 PMVKQ15126 192 aa13□□□□□ -0.33
PTX4-203ENST00000447419 FAM19A3Q7Z5A8 133 aa12.99□□□□□ -0.33
PTX4-203ENST00000447419 STPG4Q8N801 248 aa12.99□□□□□ -0.33
PTX4-203ENST00000447419 NDUFA1O15239 70 aa12.98□□□□□ -0.33
PTX4-203ENST00000447419 BAGE3Q86Y29 109 aa12.98□□□□□ -0.33
PTX4-203ENST00000447419 PACRGQ96M98 296 aaPredicted RBP12.98□□□□□ -0.33
PTX4-203ENST00000447419 LOC107984640A0A0U1RRK4 108 aa12.98□□□□□ -0.33
PTX4-203ENST00000447419 LINC01549A6NIU2 74 aa12.98□□□□□ -0.33
PTX4-203ENST00000447419 PLA2G1BP04054 148 aaKnown RBP12.98□□□□□ -0.33
PTX4-203ENST00000447419 PDZD11Q5EBL8 140 aa12.98□□□□□ -0.33
PTX4-203ENST00000447419 C6orf48Q9UBA6 75 aa12.98□□□□□ -0.33
PTX4-203ENST00000447419 SEC11AP67812 179 aa12.97□□□□□ -0.33
PTX4-203ENST00000447419 FAM19A2Q8N3H0 131 aa12.97□□□□□ -0.33
PTX4-203ENST00000447419 TINCRA0A1B0GVN0 87 aa12.96□□□□□ -0.33
PTX4-203ENST00000447419 PRSS2P07478 247 aa12.96□□□□□ -0.33
PTX4-203ENST00000447419 PTTG1IPP53801 180 aa12.96□□□□□ -0.33
PTX4-203ENST00000447419 SPINK8P0C7L1 97 aa12.95□□□□□ -0.34
PTX4-203ENST00000447419 C9orf116Q5BN46 136 aaPredicted RBP12.95□□□□□ -0.34
PTX4-203ENST00000447419 MRPL35Q9NZE8 188 aaKnown RBP12.95□□□□□ -0.34
PTX4-203ENST00000447419 PLAC8Q9NZF1 115 aa12.95□□□□□ -0.34
PTX4-203ENST00000447419 RPL37AP61513 92 aaKnown RBP12.94□□□□□ -0.34
PTX4-203ENST00000447419 CHCHD1Q96BP2 118 aaKnown RBP12.94□□□□□ -0.34
PTX4-203ENST00000447419 KRTAP10-4P60372 401 aaPredicted RBP12.93□□□□□ -0.34
PTX4-203ENST00000447419 C6orf226Q5I0X4 101 aa12.93□□□□□ -0.34
PTX4-203ENST00000447419 LINC01561Q8N1V8 128 aa12.93□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms