RNA–Protein interactions for RNA: ENST00000446716.5

ATG9A-215, Transcript of autophagy related 9A, humanhuman

TSL 2

Gene ATG9A, Length 5,245 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG9A-215ENST00000446716 A8MZ25 164 aa12.93□□□□□ -0.34
ATG9A-215ENST00000446716 C6orf99Q4VX62 202 aa12.93□□□□□ -0.34
ATG9A-215ENST00000446716 UBE2D1P51668 147 aa12.92□□□□□ -0.34
ATG9A-215ENST00000446716 MRPS36P82909 103 aaKnown RBP12.92□□□□□ -0.34
ATG9A-215ENST00000446716 MRPS12O15235 138 aaKnown RBP12.92□□□□□ -0.34
ATG9A-215ENST00000446716 RAI1Q7Z5J4 1906 aaPredicted RBP12.92□□□□□ -0.34
ATG9A-215ENST00000446716 C1orf158Q8N1D5 194 aa12.91□□□□□ -0.34
ATG9A-215ENST00000446716 ACANP16112 2415 aa12.91□□□□□ -0.34
ATG9A-215ENST00000446716 TRAV23DV6A0A075B6W5 121 aa12.9□□□□□ -0.34
ATG9A-215ENST00000446716 BPY2O14599 106 aa12.9□□□□□ -0.34
ATG9A-215ENST00000446716 FLNBO75369 2602 aaKnown RBP12.9□□□□□ -0.34
ATG9A-215ENST00000446716 PPDPFQ9H3Y8 114 aa12.89□□□□□ -0.35
ATG9A-215ENST00000446716 M0R378 163 aa12.89□□□□□ -0.35
ATG9A-215ENST00000446716 LINC00474Q9P2X8 69 aa12.89□□□□□ -0.35
ATG9A-215ENST00000446716 TCL1BO95988 128 aa12.88□□□□□ -0.35
ATG9A-215ENST00000446716 CHCHD7Q9BUK0 85 aa12.88□□□□□ -0.35
ATG9A-215ENST00000446716 CDC42SE2Q9NRR3 84 aa12.88□□□□□ -0.35
ATG9A-215ENST00000446716 SLPIP03973 132 aa12.87□□□□□ -0.35
ATG9A-215ENST00000446716 PTH2Q96A98 100 aa12.87□□□□□ -0.35
ATG9A-215ENST00000446716 ZNF706Q9Y5V0 76 aaPredicted RBP12.87□□□□□ -0.35
ATG9A-215ENST00000446716 GAS8-AS1O95177 125 aa12.87□□□□□ -0.35
ATG9A-215ENST00000446716 CNFNQ9BYD5 112 aa12.87□□□□□ -0.35
ATG9A-215ENST00000446716 MAPKAPK5-AS1Q8N8E1 139 aa12.87□□□□□ -0.35
ATG9A-215ENST00000446716 FOXI1Q12951 378 aa12.86□□□□□ -0.35
ATG9A-215ENST00000446716 WFDC9Q8NEX5 89 aa12.85□□□□□ -0.35
ATG9A-215ENST00000446716 CYSRT1A8MQ03 144 aa12.85□□□□□ -0.35
ATG9A-215ENST00000446716 IGKV4-1P06312 121 aa12.85□□□□□ -0.35
ATG9A-215ENST00000446716 ATOX1O00244 68 aa12.85□□□□□ -0.35
ATG9A-215ENST00000446716 RPL37AP8A6NKH3 93 aa12.84□□□□□ -0.35
ATG9A-215ENST00000446716 Q8IZM0 81 aa12.84□□□□□ -0.35
ATG9A-215ENST00000446716 FAM236AA0A1B0GUQ0 79 aa12.83□□□□□ -0.36
ATG9A-215ENST00000446716 FAM236BA0A1B0GV22 79 aa12.83□□□□□ -0.36
ATG9A-215ENST00000446716 TIMM17BO60830 172 aa12.83□□□□□ -0.36
ATG9A-215ENST00000446716 RNASE8Q8TDE3 154 aaKnown RBP12.83□□□□□ -0.36
ATG9A-215ENST00000446716 FHL2Q14192 279 aa12.83□□□□□ -0.36
ATG9A-215ENST00000446716 DHRS4-AS1Q9P1J3 65 aa12.83□□□□□ -0.36
ATG9A-215ENST00000446716 ADAMTS20P59510 1910 aa12.82□□□□□ -0.36
ATG9A-215ENST00000446716 TMEM258P61165 79 aa12.82□□□□□ -0.36
ATG9A-215ENST00000446716 ATG2AQ2TAZ0 1938 aa12.82□□□□□ -0.36
ATG9A-215ENST00000446716 PLAC8L1A1L4L8 177 aa12.82□□□□□ -0.36
ATG9A-215ENST00000446716 G3V4G9 280 aa12.81□□□□□ -0.36
ATG9A-215ENST00000446716 NHLRC4P0CG21 123 aaPredicted RBP12.81□□□□□ -0.36
ATG9A-215ENST00000446716 UPK3BQ9BT76 320 aa12.81□□□□□ -0.36
ATG9A-215ENST00000446716 COX17Q14061 63 aa12.8□□□□□ -0.36
ATG9A-215ENST00000446716 SPINK6Q6UWN8 80 aa12.8□□□□□ -0.36
ATG9A-215ENST00000446716 Q6ZQY7 126 aa12.8□□□□□ -0.36
ATG9A-215ENST00000446716 TRIAP1O43715 76 aa12.79□□□□□ -0.36
ATG9A-215ENST00000446716 CCKP06307 115 aa12.79□□□□□ -0.36
ATG9A-215ENST00000446716 UNQ6190/PRO20217Q6UXQ8 127 aa12.79□□□□□ -0.36
ATG9A-215ENST00000446716 EXPH5Q8NEV8 1989 aa12.79□□□□□ -0.36
ATG9A-215ENST00000446716 TP73-AS1Q9UF72 201 aa12.79□□□□□ -0.36
ATG9A-215ENST00000446716 LINC00242Q5T6M2 205 aa12.78□□□□□ -0.36
ATG9A-215ENST00000446716 MUC7Q8TAX7 377 aa12.78□□□□□ -0.36
ATG9A-215ENST00000446716 IGLV5-52A0A0A0MRZ9 124 aa12.78□□□□□ -0.36
ATG9A-215ENST00000446716 SMIM20Q8N5G0 67 aa12.78□□□□□ -0.36
ATG9A-215ENST00000446716 F8P00451 2351 aa12.78□□□□□ -0.36
ATG9A-215ENST00000446716 Q8N2B8 174 aa12.77□□□□□ -0.36
ATG9A-215ENST00000446716 EGFEM1PQ0D2K5 195 aa12.77□□□□□ -0.36
ATG9A-215ENST00000446716 SS18L2Q9UHA2 77 aa12.77□□□□□ -0.37
ATG9A-215ENST00000446716 ZNF73O43830 326 aaPredicted RBP12.76□□□□□ -0.37
ATG9A-215ENST00000446716 C5orf47Q569G3 176 aa12.76□□□□□ -0.37
ATG9A-215ENST00000446716 LINC00643Q86TS7 51 aa12.76□□□□□ -0.37
ATG9A-215ENST00000446716 TRBV30A0A0K0K1B3 111 aa12.75□□□□□ -0.37
ATG9A-215ENST00000446716 USP17L23D6RBM5 183 aa12.75□□□□□ -0.37
ATG9A-215ENST00000446716 IGLV4-60A0A075B6I1 120 aa12.75□□□□□ -0.37
ATG9A-215ENST00000446716 IGIPA6NJ69 53 aa12.75□□□□□ -0.37
ATG9A-215ENST00000446716 M0QXV9 152 aa12.75□□□□□ -0.37
ATG9A-215ENST00000446716 C1orf134Q5TEV5 83 aa12.75□□□□□ -0.37
ATG9A-215ENST00000446716 ANKRD17O75179 2603 aaKnown RBP12.75□□□□□ -0.37
ATG9A-215ENST00000446716 HRCT1Q6UXD1 115 aa12.75□□□□□ -0.37
ATG9A-215ENST00000446716 IGLV9-49A0A0B4J1Y8 123 aa12.74□□□□□ -0.37
ATG9A-215ENST00000446716 SCXQ7RTU7 201 aa12.74□□□□□ -0.37
ATG9A-215ENST00000446716 C6orf223Q8N319 242 aa12.74□□□□□ -0.37
ATG9A-215ENST00000446716 YPEL4Q96NS1 127 aa12.74□□□□□ -0.37
ATG9A-215ENST00000446716 CPAMD8Q8IZJ3 1885 aa12.74□□□□□ -0.37
ATG9A-215ENST00000446716 FHL3Q13643 280 aa12.73□□□□□ -0.37
ATG9A-215ENST00000446716 BEAN1Q3B7T3 259 aa12.73□□□□□ -0.37
ATG9A-215ENST00000446716 TEX49A0A1B0GTD5 131 aa12.73□□□□□ -0.37
ATG9A-215ENST00000446716 POM121L12Q8N7R1 296 aa12.73□□□□□ -0.37
ATG9A-215ENST00000446716 C3orf84H3BNL1 204 aa12.73□□□□□ -0.37
ATG9A-215ENST00000446716 LINC00694P0DN24 101 aa12.72□□□□□ -0.37
ATG9A-215ENST00000446716 RPL28P46779 137 aaKnown RBP12.72□□□□□ -0.37
ATG9A-215ENST00000446716 CASC2Q6XLA1 102 aa12.71□□□□□ -0.37
ATG9A-215ENST00000446716 WFDC10BQ8IUB3 73 aa12.71□□□□□ -0.37
ATG9A-215ENST00000446716 LYPD5Q6UWN5 251 aa12.71□□□□□ -0.38
ATG9A-215ENST00000446716 SMIM11BQ8TCY0 68 aa12.71□□□□□ -0.38
ATG9A-215ENST00000446716 KRTAP24-1Q3LI83 254 aa12.7□□□□□ -0.38
ATG9A-215ENST00000446716 B5MCH6 92 aa12.7□□□□□ -0.38
ATG9A-215ENST00000446716 C9orf116Q5BN46 136 aaPredicted RBP12.7□□□□□ -0.38
ATG9A-215ENST00000446716 SMIM1B2RUZ4 78 aa12.69□□□□□ -0.38
ATG9A-215ENST00000446716 COX8CQ7Z4L0 72 aa12.69□□□□□ -0.38
ATG9A-215ENST00000446716 EML5Q05BV3 1969 aa12.68□□□□□ -0.38
ATG9A-215ENST00000446716 SEC61GP60059 68 aa12.67□□□□□ -0.38
ATG9A-215ENST00000446716 GOLGB1Q14789 3259 aaKnown RBP12.67□□□□□ -0.38
ATG9A-215ENST00000446716 Q6ZSN1 163 aa12.66□□□□□ -0.38
ATG9A-215ENST00000446716 CSDC2Q9Y534 153 aaKnown RBP12.66□□□□□ -0.38
ATG9A-215ENST00000446716 COX6A2Q02221 97 aa12.65□□□□□ -0.38
ATG9A-215ENST00000446716 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP12.65□□□□□ -0.38
ATG9A-215ENST00000446716 SDIM1Q6ZPB5 146 aa12.65□□□□□ -0.38
ATG9A-215ENST00000446716 A0A1B0GUV1 79 aa12.64□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 168 ms