RNA–Protein interactions for RNA: ENST00000443247.1

AC003001.1-201, humanhuman

TSL 5 BASIC

Gene AC003001.1, Length 1,135 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC003001.1-201ENST00000443247 DNAH2Q9P225 4427 aa1.32□□□□□ -2.2
AC003001.1-201ENST00000443247 VPS13DQ5THJ4 4388 aa1.31□□□□□ -2.2
AC003001.1-201ENST00000443247 A0A087WSZ3 146 aa1.31□□□□□ -2.2
AC003001.1-201ENST00000443247 TRAV16A0A0A6YYK6 109 aaPredicted RBP1.31□□□□□ -2.2
AC003001.1-201ENST00000443247 TRAV12-1A0A0B4J245 112 aa1.31□□□□□ -2.2
AC003001.1-201ENST00000443247 A0A1B0GV90 55 aa1.31□□□□□ -2.2
AC003001.1-201ENST00000443247 hDV103S1A0JD37 113 aa1.31□□□□□ -2.2
AC003001.1-201ENST00000443247 OR2T8A6NH00 312 aa1.31□□□□□ -2.2
AC003001.1-201ENST00000443247 E7EUB6 86 aa1.31□□□□□ -2.2
AC003001.1-201ENST00000443247 J3QR89 54 aa1.31□□□□□ -2.2
AC003001.1-201ENST00000443247 TPST1O60507 370 aa1.31□□□□□ -2.2
AC003001.1-201ENST00000443247 NCR2O95944 276 aa1.31□□□□□ -2.2
AC003001.1-201ENST00000443247 HBDP02042 147 aa1.31□□□□□ -2.2
AC003001.1-201ENST00000443247 GPX1P07203 203 aa1.31□□□□□ -2.2
AC003001.1-201ENST00000443247 SAA1P0DJI8 122 aaPredicted RBP1.31□□□□□ -2.2
AC003001.1-201ENST00000443247 TPT1P13693 172 aaKnown RBP1.31□□□□□ -2.2
AC003001.1-201ENST00000443247 RPL38P63173 70 aaKnown RBP1.31□□□□□ -2.2
AC003001.1-201ENST00000443247 CDK6Q00534 326 aa1.31□□□□□ -2.2
AC003001.1-201ENST00000443247 PDE6HQ13956 83 aa1.31□□□□□ -2.2
AC003001.1-201ENST00000443247 ELOBQ15370 118 aa1.31□□□□□ -2.2
AC003001.1-201ENST00000443247 Q1T7F1 81 aa1.31□□□□□ -2.2
AC003001.1-201ENST00000443247 OR2T2Q6IF00 324 aa1.31□□□□□ -2.2
AC003001.1-201ENST00000443247 HAGHLQ6PII5 290 aaPredicted RBP1.31□□□□□ -2.2
AC003001.1-201ENST00000443247 C10orf99Q6UWK7 81 aa1.31□□□□□ -2.2
AC003001.1-201ENST00000443247 TMEM91Q6ZNR0 172 aa1.31□□□□□ -2.2
AC003001.1-201ENST00000443247 UBE2DNLQ8IWF7 75 aa1.31□□□□□ -2.2
AC003001.1-201ENST00000443247 LINC00311Q8N616 119 aa1.31□□□□□ -2.2
AC003001.1-201ENST00000443247 OR5D14Q8NGL3 314 aa1.31□□□□□ -2.2
AC003001.1-201ENST00000443247 TP53RKQ96S44 253 aa1.31□□□□□ -2.2
AC003001.1-201ENST00000443247 CST9LQ9H4G1 147 aa1.31□□□□□ -2.2
AC003001.1-201ENST00000443247 TPRKBQ9Y3C4 175 aa1.31□□□□□ -2.2
AC003001.1-201ENST00000443247 HILPDAQ9Y5L2 63 aa1.31□□□□□ -2.2
AC003001.1-201ENST00000443247 MYCBP2O75592 4640 aa1.3□□□□□ -2.2
AC003001.1-201ENST00000443247 DYNC1H1Q14204 4646 aaKnown RBP1.3□□□□□ -2.2
AC003001.1-201ENST00000443247 C2orf70A6NJV1 201 aa1.3□□□□□ -2.2
AC003001.1-201ENST00000443247 OOSP1A8MZH6 123 aa1.3□□□□□ -2.2
AC003001.1-201ENST00000443247 LINC00587B1AMM8 73 aa1.3□□□□□ -2.2
AC003001.1-201ENST00000443247 DLEU1O43261 78 aa1.3□□□□□ -2.2
AC003001.1-201ENST00000443247 PRB4P10163 310 aaPredicted RBP1.3□□□□□ -2.2
AC003001.1-201ENST00000443247 HLA-DRB4P13762 266 aa1.3□□□□□ -2.2
AC003001.1-201ENST00000443247 RRAS2P62070 204 aaPredicted RBP1.3□□□□□ -2.2
AC003001.1-201ENST00000443247 LSM3P62310 102 aaKnown RBP1.3□□□□□ -2.2
AC003001.1-201ENST00000443247 SELENOWP63302 87 aa1.3□□□□□ -2.2
AC003001.1-201ENST00000443247 TEN1Q86WV5 123 aa1.3□□□□□ -2.2
AC003001.1-201ENST00000443247 C5orf56Q8N8D9 126 aa1.3□□□□□ -2.2
AC003001.1-201ENST00000443247 TMEM254Q8TBM7 123 aa1.3□□□□□ -2.2
AC003001.1-201ENST00000443247 SFT2D1Q8WV19 159 aa1.3□□□□□ -2.2
AC003001.1-201ENST00000443247 CLEC2BQ92478 149 aa1.3□□□□□ -2.2
AC003001.1-201ENST00000443247 RAB37Q96AX2 223 aa1.3□□□□□ -2.2
AC003001.1-201ENST00000443247 MRPL57Q9BQC6 102 aaKnown RBP1.3□□□□□ -2.2
AC003001.1-201ENST00000443247 TXNDC17Q9BRA2 123 aa1.3□□□□□ -2.2
AC003001.1-201ENST00000443247 FKBP11Q9NYL4 201 aa1.3□□□□□ -2.2
AC003001.1-201ENST00000443247 HLA-DRB4X5D2U9 266 aa1.3□□□□□ -2.2
AC003001.1-201ENST00000443247 DNAH17Q9UFH2 4485 aa1.29□□□□□ -2.2
AC003001.1-201ENST00000443247 TRAV27A0A087WT01 109 aa1.29□□□□□ -2.2
AC003001.1-201ENST00000443247 A0A1B0GWA3 101 aa1.29□□□□□ -2.2
AC003001.1-201ENST00000443247 LOC107986453A0A1B0GWG9 222 aa1.29□□□□□ -2.2
AC003001.1-201ENST00000443247 K7ERU9 68 aa1.29□□□□□ -2.2
AC003001.1-201ENST00000443247 SLC25A4P12235 298 aa1.29□□□□□ -2.2
AC003001.1-201ENST00000443247 HIST1H1BP16401 226 aaKnown RBP1.29□□□□□ -2.2
AC003001.1-201ENST00000443247 CCL3L1P16619 93 aa1.29□□□□□ -2.2
AC003001.1-201ENST00000443247 SNRPD3P62318 126 aaKnown RBP1.29□□□□□ -2.2
AC003001.1-201ENST00000443247 DEFB135Q30KP9 77 aa1.29□□□□□ -2.2
AC003001.1-201ENST00000443247 ARPINQ7Z6K5 226 aa1.29□□□□□ -2.2
AC003001.1-201ENST00000443247 TCTEX1D1Q8N7M0 179 aa1.29□□□□□ -2.2
AC003001.1-201ENST00000443247 OR10AC1Q8NH08 325 aa1.29□□□□□ -2.2
AC003001.1-201ENST00000443247 MYOZ3Q8TDC0 251 aa1.29□□□□□ -2.2
AC003001.1-201ENST00000443247 DYNLRB2Q8TF09 96 aa1.29□□□□□ -2.2
AC003001.1-201ENST00000443247 ARL11Q969Q4 196 aa1.29□□□□□ -2.2
AC003001.1-201ENST00000443247 PPP3R2Q96LZ3 170 aa1.29□□□□□ -2.2
AC003001.1-201ENST00000443247 GAFA1Q96PS6 74 aa1.29□□□□□ -2.2
AC003001.1-201ENST00000443247 NABP2Q9BQ15 211 aa1.29□□□□□ -2.2
AC003001.1-201ENST00000443247 C2orf88Q9BSF0 95 aa1.29□□□□□ -2.2
AC003001.1-201ENST00000443247 COMMD3Q9UBI1 195 aa1.29□□□□□ -2.2
AC003001.1-201ENST00000443247 DNAJC15Q9Y5T4 150 aa1.29□□□□□ -2.2
AC003001.1-201ENST00000443247 APOBP04114 4563 aaKnown RBP1.28□□□□□ -2.2
AC003001.1-201ENST00000443247 TRAV10A0A0B4J240 114 aa1.28□□□□□ -2.2
AC003001.1-201ENST00000443247 FAM236AA0A1B0GUQ0 79 aa1.28□□□□□ -2.2
AC003001.1-201ENST00000443247 FAM236BA0A1B0GV22 79 aa1.28□□□□□ -2.2
AC003001.1-201ENST00000443247 ZNF670-ZNF695F2Z2N8 137 aa1.28□□□□□ -2.2
AC003001.1-201ENST00000443247 M0R135 149 aa1.28□□□□□ -2.2
AC003001.1-201ENST00000443247 M0R2N4 97 aa1.28□□□□□ -2.2
AC003001.1-201ENST00000443247 HMGN4O00479 90 aa1.28□□□□□ -2.2
AC003001.1-201ENST00000443247 IFNA17P01571 189 aa1.28□□□□□ -2.2
AC003001.1-201ENST00000443247 TRACP01848 142 aa1.28□□□□□ -2.2
AC003001.1-201ENST00000443247 APOC1P02654 83 aa1.28□□□□□ -2.2
AC003001.1-201ENST00000443247 CD3DP04234 171 aa1.28□□□□□ -2.2
AC003001.1-201ENST00000443247 PIPP12273 146 aaPredicted RBP1.28□□□□□ -2.2
AC003001.1-201ENST00000443247 EDDM3BP56851 147 aa1.28□□□□□ -2.2
AC003001.1-201ENST00000443247 EMX2Q04743 252 aa1.28□□□□□ -2.2
AC003001.1-201ENST00000443247 CIRBPQ14011 172 aaKnown RBP1.28□□□□□ -2.2
AC003001.1-201ENST00000443247 NEDD8Q15843 81 aa1.28□□□□□ -2.2
AC003001.1-201ENST00000443247 ASB16-AS1Q495Z4 193 aa1.28□□□□□ -2.2
AC003001.1-201ENST00000443247 KRTAP26-1Q6PEX3 210 aa1.28□□□□□ -2.2
AC003001.1-201ENST00000443247 LINC00322Q6ZN03 302 aaPredicted RBP1.28□□□□□ -2.2
AC003001.1-201ENST00000443247 RPS27LQ71UM5 84 aaKnown RBP1.28□□□□□ -2.2
AC003001.1-201ENST00000443247 CLECL1Q8IZS7 167 aa1.28□□□□□ -2.2
AC003001.1-201ENST00000443247 LINC00269Q8N2A0 174 aa1.28□□□□□ -2.2
AC003001.1-201ENST00000443247 C10orf111Q8N326 155 aa1.28□□□□□ -2.2
AC003001.1-201ENST00000443247 SPTSSAQ969W0 71 aa1.28□□□□□ -2.2
Retrieved 100 of 20,778 RNA–protein pairs in 80 ms