RNA–Protein interactions for RNA: ENST00000442441.5

TMEM50B-204, Transcript of transmembrane protein 50B, humanhuman

TSL 1 (best)

Gene TMEM50B, Length 982 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM50B-204ENST00000442441 GAGE2EQ4V326 116 aa12.2□□□□□ -0.46
TMEM50B-204ENST00000442441 UNQ6190/PRO20217Q6UXQ8 127 aa12.2□□□□□ -0.46
TMEM50B-204ENST00000442441 C6orf48Q9UBA6 75 aa12.2□□□□□ -0.46
TMEM50B-204ENST00000442441 GAGE2DQ9UEU5 116 aa12.2□□□□□ -0.46
TMEM50B-204ENST00000442441 M0QXV9 152 aa12.19□□□□□ -0.46
TMEM50B-204ENST00000442441 SMDT1Q9H4I9 107 aa12.19□□□□□ -0.46
TMEM50B-204ENST00000442441 CARHSP1Q9Y2V2 147 aaKnown RBP12.19□□□□□ -0.46
TMEM50B-204ENST00000442441 PPP1R2P9O14990 202 aa12.18□□□□□ -0.46
TMEM50B-204ENST00000442441 SLC51BQ86UW2 128 aa12.18□□□□□ -0.46
TMEM50B-204ENST00000442441 FAM104AQ969W3 186 aa12.17□□□□□ -0.46
TMEM50B-204ENST00000442441 CEBPGP53567 150 aa12.16□□□□□ -0.46
TMEM50B-204ENST00000442441 RIGQ13278 110 aa12.16□□□□□ -0.46
TMEM50B-204ENST00000442441 LCE2AQ5TA79 106 aaPredicted RBP12.16□□□□□ -0.46
TMEM50B-204ENST00000442441 RPL39P62891 51 aaKnown RBP12.15□□□□□ -0.46
TMEM50B-204ENST00000442441 LINC01551Q86U37 167 aa12.15□□□□□ -0.46
TMEM50B-204ENST00000442441 OSTCQ9NRP0 149 aa12.14□□□□□ -0.47
TMEM50B-204ENST00000442441 TSPAN13O95857 204 aa12.13□□□□□ -0.47
TMEM50B-204ENST00000442441 C20orf78Q9BR46 151 aa12.13□□□□□ -0.47
TMEM50B-204ENST00000442441 SPANXA1Q9NS26 97 aa12.13□□□□□ -0.47
TMEM50B-204ENST00000442441 IFITM10A6NMD0 228 aa12.12□□□□□ -0.47
TMEM50B-204ENST00000442441 TCAPO15273 167 aa12.12□□□□□ -0.47
TMEM50B-204ENST00000442441 MRPS36P82909 103 aaKnown RBP12.12□□□□□ -0.47
TMEM50B-204ENST00000442441 KIAA0087Q14695 138 aa12.12□□□□□ -0.47
TMEM50B-204ENST00000442441 MRPL51Q4U2R6 128 aaKnown RBP12.12□□□□□ -0.47
TMEM50B-204ENST00000442441 SMIM7Q9BQ49 75 aa12.12□□□□□ -0.47
TMEM50B-204ENST00000442441 ZNF861PO60384 105 aa12.11□□□□□ -0.47
TMEM50B-204ENST00000442441 RPL32P62910 135 aaKnown RBP12.11□□□□□ -0.47
TMEM50B-204ENST00000442441 HBBP68871 147 aa12.11□□□□□ -0.47
TMEM50B-204ENST00000442441 C9orf129Q5T035 196 aaKnown RBP12.11□□□□□ -0.47
TMEM50B-204ENST00000442441 FAM104BQ5XKR9 115 aa12.11□□□□□ -0.47
TMEM50B-204ENST00000442441 TRBV24-1A0A075B6N3 115 aa12.1□□□□□ -0.47
TMEM50B-204ENST00000442441 TGIF2-C20orf24A0A0A6YYL0 155 aa12.1□□□□□ -0.47
TMEM50B-204ENST00000442441 TRBV30A0A0K0K1B3 111 aa12.1□□□□□ -0.47
TMEM50B-204ENST00000442441 KRTAP9-6A0A140TA67 174 aa12.1□□□□□ -0.47
TMEM50B-204ENST00000442441 NDUFC2-KCTD14E9PQ53 114 aa12.1□□□□□ -0.47
TMEM50B-204ENST00000442441 LINC00862A6NCI5 91 aa12.09□□□□□ -0.47
TMEM50B-204ENST00000442441 BLOC1S1P78537 153 aa12.09□□□□□ -0.47
TMEM50B-204ENST00000442441 V9GYV3 84 aa12.09□□□□□ -0.47
TMEM50B-204ENST00000442441 C2orf82Q6UX34 121 aa12.08□□□□□ -0.48
TMEM50B-204ENST00000442441 CKS2P33552 79 aa12.07□□□□□ -0.48
TMEM50B-204ENST00000442441 NAT8BQ9UHF3 227 aa12.07□□□□□ -0.48
TMEM50B-204ENST00000442441 ZNF727A8MUV8 499 aa12.06□□□□□ -0.48
TMEM50B-204ENST00000442441 TCTE3Q8IZS6 198 aa12.06□□□□□ -0.48
TMEM50B-204ENST00000442441 PACRGQ96M98 296 aaPredicted RBP12.06□□□□□ -0.48
TMEM50B-204ENST00000442441 SMIM2Q9BVW6 85 aa12.06□□□□□ -0.48
TMEM50B-204ENST00000442441 NUPR1O60356 82 aa12.05□□□□□ -0.48
TMEM50B-204ENST00000442441 TNFRSF6BO95407 300 aa12.05□□□□□ -0.48
TMEM50B-204ENST00000442441 LINC00242Q5T6M2 205 aa12.04□□□□□ -0.48
TMEM50B-204ENST00000442441 EIF5A2Q9GZV4 153 aaKnown RBP12.04□□□□□ -0.48
TMEM50B-204ENST00000442441 A0A087X002 238 aa12.03□□□□□ -0.48
TMEM50B-204ENST00000442441 ALKAL2Q6UX46 152 aa12.03□□□□□ -0.48
TMEM50B-204ENST00000442441 FAM74A3Q4VXF1 159 aa12.02□□□□□ -0.49
TMEM50B-204ENST00000442441 C22orf24Q9Y442 160 aa12.02□□□□□ -0.49
TMEM50B-204ENST00000442441 IFI27P40305 119 aaPredicted RBP12.01□□□□□ -0.49
TMEM50B-204ENST00000442441 CTDSP1Q9GZU7 261 aa12.01□□□□□ -0.49
TMEM50B-204ENST00000442441 A0A1B0GW15 77 aa12□□□□□ -0.49
TMEM50B-204ENST00000442441 D6R8Y8 96 aa12□□□□□ -0.49
TMEM50B-204ENST00000442441 CRYGAP11844 174 aa12□□□□□ -0.49
TMEM50B-204ENST00000442441 LBHQ53QV2 105 aaPredicted RBP12□□□□□ -0.49
TMEM50B-204ENST00000442441 TYMSOSQ8TAI1 123 aa12□□□□□ -0.49
TMEM50B-204ENST00000442441 NPYP01303 97 aa11.99□□□□□ -0.49
TMEM50B-204ENST00000442441 SRP19P09132 144 aaKnown RBP11.99□□□□□ -0.49
TMEM50B-204ENST00000442441 LINC01561Q8N1V8 128 aa11.99□□□□□ -0.49
TMEM50B-204ENST00000442441 PYGO1Q9Y3Y4 419 aa11.99□□□□□ -0.49
TMEM50B-204ENST00000442441 IGLV4-3A0A075B6K6 122 aa11.98□□□□□ -0.49
TMEM50B-204ENST00000442441 SMIM27A0A1W2PRY6 76 aa11.98□□□□□ -0.49
TMEM50B-204ENST00000442441 RPL28P46779 137 aaKnown RBP11.98□□□□□ -0.49
TMEM50B-204ENST00000442441 LINC00469Q8N7U9 141 aa11.98□□□□□ -0.49
TMEM50B-204ENST00000442441 RAB5AP20339 215 aa11.96□□□□□ -0.49
TMEM50B-204ENST00000442441 RPL23P62829 140 aaKnown RBP11.96□□□□□ -0.49
TMEM50B-204ENST00000442441 TMEM141Q96I45 108 aa11.96□□□□□ -0.49
TMEM50B-204ENST00000442441 XAGE1AQ9HD64 81 aa11.96□□□□□ -0.49
TMEM50B-204ENST00000442441 MUC17Q685J3 4493 aa11.95□□□□□ -0.5
TMEM50B-204ENST00000442441 BCE1O60756 84 aa11.95□□□□□ -0.5
TMEM50B-204ENST00000442441 PRSS2P07478 247 aa11.95□□□□□ -0.5
TMEM50B-204ENST00000442441 CKS1BP61024 79 aa11.95□□□□□ -0.5
TMEM50B-204ENST00000442441 F8W036 122 aa11.94□□□□□ -0.5
TMEM50B-204ENST00000442441 PPBPP02775 128 aa11.94□□□□□ -0.5
TMEM50B-204ENST00000442441 TEX43Q6ZNM6 134 aa11.94□□□□□ -0.5
TMEM50B-204ENST00000442441 TP73-AS1Q9UF72 201 aa11.94□□□□□ -0.5
TMEM50B-204ENST00000442441 S100A8P05109 93 aa11.93□□□□□ -0.5
TMEM50B-204ENST00000442441 ADIRFQ15847 76 aa11.93□□□□□ -0.5
TMEM50B-204ENST00000442441 Q6ZN92 141 aa11.93□□□□□ -0.5
TMEM50B-204ENST00000442441 MRPL55Q7Z7F7 128 aaKnown RBP11.93□□□□□ -0.5
TMEM50B-204ENST00000442441 RETNLBQ9BQ08 111 aa11.93□□□□□ -0.5
TMEM50B-204ENST00000442441 TOMM7Q9P0U1 55 aa11.93□□□□□ -0.5
TMEM50B-204ENST00000442441 C6orf226Q5I0X4 101 aa11.92□□□□□ -0.5
TMEM50B-204ENST00000442441 MRPL54Q6P161 138 aaKnown RBP11.92□□□□□ -0.5
TMEM50B-204ENST00000442441 C2orf88Q9BSF0 95 aa11.92□□□□□ -0.5
TMEM50B-204ENST00000442441 Q8IZM0 81 aa11.91□□□□□ -0.5
TMEM50B-204ENST00000442441 CDIP1Q9H305 208 aa11.91□□□□□ -0.5
TMEM50B-204ENST00000442441 ANAPC11Q9NYG5 84 aa11.91□□□□□ -0.5
TMEM50B-204ENST00000442441 A0A1B0GXF2 115 aa11.9□□□□□ -0.5
TMEM50B-204ENST00000442441 ORMDL3Q8N138 153 aa11.9□□□□□ -0.5
TMEM50B-204ENST00000442441 KRTAP13-2Q52LG2 175 aa11.89□□□□□ -0.51
TMEM50B-204ENST00000442441 ZC2HC1BQ5TFG8 222 aa11.89□□□□□ -0.51
TMEM50B-204ENST00000442441 ALKBH7Q9BT30 221 aaPredicted RBP11.89□□□□□ -0.51
TMEM50B-204ENST00000442441 NAT8Q9UHE5 227 aa11.89□□□□□ -0.51
TMEM50B-204ENST00000442441 TPRXLQ17RH7 258 aa11.88□□□□□ -0.51
TMEM50B-204ENST00000442441 TMEM136Q6ZRR5 245 aa11.88□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 65.1 ms