RNA–Protein interactions for RNA: ENST00000440538.6

PUM1-207, Transcript of pumilio RNA binding family member 1, humanhuman

TSL 1 (best) BASIC

Gene PUM1, Length 3,936 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PUM1-207ENST00000440538 LINC01620Q4KN68 170 aa4.49□□□□□ -1.69
PUM1-207ENST00000440538 CELA1Q9UNI1 258 aa4.49□□□□□ -1.69
PUM1-207ENST00000440538 MEIG1Q5JSS6 88 aa4.49□□□□□ -1.69
PUM1-207ENST00000440538 SDHAF1A6NFY7 115 aa4.48□□□□□ -1.69
PUM1-207ENST00000440538 LINC00315P59091 139 aa4.48□□□□□ -1.69
PUM1-207ENST00000440538 IGHV3-38A0A0C4DH36 116 aa4.48□□□□□ -1.69
PUM1-207ENST00000440538 A0A0U1RRA0 63 aa4.48□□□□□ -1.69
PUM1-207ENST00000440538 TMEM262E9PQX1 116 aa4.48□□□□□ -1.69
PUM1-207ENST00000440538 ZNF22P17026 224 aaPredicted RBP4.48□□□□□ -1.69
PUM1-207ENST00000440538 DAD1P61803 113 aa4.48□□□□□ -1.69
PUM1-207ENST00000440538 EGFEM1PQ0D2K5 195 aa4.48□□□□□ -1.69
PUM1-207ENST00000440538 ADAMTSL4-AS1Q5T5F5 129 aa4.48□□□□□ -1.69
PUM1-207ENST00000440538 TRGV4A0A0C4DH28 118 aa4.48□□□□□ -1.69
PUM1-207ENST00000440538 LYRM7Q5U5X0 104 aa4.48□□□□□ -1.69
PUM1-207ENST00000440538 COL7A1Q02388 2944 aa4.48□□□□□ -1.69
PUM1-207ENST00000440538 ZNF415Q09FC8 603 aa4.47□□□□□ -1.69
PUM1-207ENST00000440538 C2orf82Q6UX34 121 aa4.47□□□□□ -1.69
PUM1-207ENST00000440538 OVOL2Q9BRP0 275 aa4.47□□□□□ -1.69
PUM1-207ENST00000440538 Q9UF83 564 aa4.47□□□□□ -1.69
PUM1-207ENST00000440538 TRGV11A0A075B6L2 103 aa4.47□□□□□ -1.69
PUM1-207ENST00000440538 H7C423 109 aa4.47□□□□□ -1.69
PUM1-207ENST00000440538 PPDPFQ9H3Y8 114 aa4.47□□□□□ -1.69
PUM1-207ENST00000440538 KIF25-AS1Q9Y6Z4 181 aa4.47□□□□□ -1.69
PUM1-207ENST00000440538 POLR2KP53803 58 aaKnown RBP4.46□□□□□ -1.69
PUM1-207ENST00000440538 UBE2WQ96B02 151 aa4.46□□□□□ -1.69
PUM1-207ENST00000440538 X6R8D5 127 aa4.46□□□□□ -1.69
PUM1-207ENST00000440538 LOC100131303A0A0U1RQF7 123 aa4.46□□□□□ -1.7
PUM1-207ENST00000440538 TMEM223A0PJW6 202 aa4.46□□□□□ -1.7
PUM1-207ENST00000440538 ATXN8Q156A1 80 aa4.46□□□□□ -1.7
PUM1-207ENST00000440538 A0A0J9YXY3 114 aa4.46□□□□□ -1.7
PUM1-207ENST00000440538 Q6ZTC4 211 aa4.46□□□□□ -1.7
PUM1-207ENST00000440538 KLK5Q9Y337 293 aaPredicted RBP4.46□□□□□ -1.7
PUM1-207ENST00000440538 LENEPQ9Y5L5 61 aa4.46□□□□□ -1.7
PUM1-207ENST00000440538 CSNK1G2-AS1Q8NCQ2 148 aa4.45□□□□□ -1.7
PUM1-207ENST00000440538 CMYA5Q8N3K9 4069 aa4.45□□□□□ -1.7
PUM1-207ENST00000440538 VCYO14598 125 aa4.45□□□□□ -1.7
PUM1-207ENST00000440538 RS1O15537 224 aa4.45□□□□□ -1.7
PUM1-207ENST00000440538 ZNF625Q96I27 306 aaPredicted RBP4.45□□□□□ -1.7
PUM1-207ENST00000440538 FAM19A4Q96LR4 140 aa4.45□□□□□ -1.7
PUM1-207ENST00000440538 TRBV10-2A0A0K0K1G8 114 aa4.45□□□□□ -1.7
PUM1-207ENST00000440538 LOC107984640A0A0U1RRK4 108 aa4.45□□□□□ -1.7
PUM1-207ENST00000440538 LEPROTO15243 131 aa4.45□□□□□ -1.7
PUM1-207ENST00000440538 C11orf45Q8TAV5 145 aa4.45□□□□□ -1.7
PUM1-207ENST00000440538 M0R2P5 195 aa4.44□□□□□ -1.7
PUM1-207ENST00000440538 IGHV3-30-3P0DP02 117 aa4.44□□□□□ -1.7
PUM1-207ENST00000440538 ICOSQ9Y6W8 199 aa4.44□□□□□ -1.7
PUM1-207ENST00000440538 IGKV3OR2-268A0A0C4DH90 116 aa4.44□□□□□ -1.7
PUM1-207ENST00000440538 C16orf74Q96GX8 76 aa4.44□□□□□ -1.7
PUM1-207ENST00000440538 SPART-AS1P0CW21 52 aa4.44□□□□□ -1.7
PUM1-207ENST00000440538 MRPL23Q16540 153 aaKnown RBP4.44□□□□□ -1.7
PUM1-207ENST00000440538 Q6ZSN1 163 aa4.44□□□□□ -1.7
PUM1-207ENST00000440538 KIR2DL5BQ8NHK3 375 aa4.44□□□□□ -1.7
PUM1-207ENST00000440538 I3L3M4 83 aa4.43□□□□□ -1.7
PUM1-207ENST00000440538 TMEM141Q96I45 108 aa4.43□□□□□ -1.7
PUM1-207ENST00000440538 IGLV4-3A0A075B6K6 122 aa4.43□□□□□ -1.7
PUM1-207ENST00000440538 A0A0B4J2C4 111 aa4.43□□□□□ -1.7
PUM1-207ENST00000440538 FAM236AA0A1B0GUQ0 79 aa4.43□□□□□ -1.7
PUM1-207ENST00000440538 FAM236BA0A1B0GV22 79 aa4.43□□□□□ -1.7
PUM1-207ENST00000440538 WIPF1O43516 503 aa4.43□□□□□ -1.7
PUM1-207ENST00000440538 PAPPA-AS1Q5QFB9 102 aa4.43□□□□□ -1.7
PUM1-207ENST00000440538 TIMM17AQ99595 171 aa4.43□□□□□ -1.7
PUM1-207ENST00000440538 LITAFQ99732 161 aa4.43□□□□□ -1.7
PUM1-207ENST00000440538 C11orf72Q8NBR9 251 aa4.43□□□□□ -1.7
PUM1-207ENST00000440538 LINC00694P0DN24 101 aa4.42□□□□□ -1.7
PUM1-207ENST00000440538 Q8NAQ8 132 aa4.42□□□□□ -1.7
PUM1-207ENST00000440538 SMCR5Q8TEV8 140 aa4.42□□□□□ -1.7
PUM1-207ENST00000440538 M0QY20 66 aa4.42□□□□□ -1.7
PUM1-207ENST00000440538 RPL13AP40429 203 aaKnown RBP4.42□□□□□ -1.7
PUM1-207ENST00000440538 POM121L12Q8N7R1 296 aa4.42□□□□□ -1.7
PUM1-207ENST00000440538 TIMM21Q9BVV7 248 aa4.42□□□□□ -1.7
PUM1-207ENST00000440538 IGKV2D-29A0A075B6S2 120 aaPredicted RBP4.42□□□□□ -1.7
PUM1-207ENST00000440538 DEFB131BA0A096LNP1 70 aa4.42□□□□□ -1.7
PUM1-207ENST00000440538 IGKV2-29A2NJV5 120 aaPredicted RBP4.42□□□□□ -1.7
PUM1-207ENST00000440538 FAM104AQ969W3 186 aa4.42□□□□□ -1.7
PUM1-207ENST00000440538 PRKDCP78527 4128 aaKnown RBP4.42□□□□□ -1.7
PUM1-207ENST00000440538 TRBV30A0A0K0K1B3 111 aa4.41□□□□□ -1.7
PUM1-207ENST00000440538 TRBV27A0A0K0K1C4 114 aa4.41□□□□□ -1.7
PUM1-207ENST00000440538 M0QXV9 152 aa4.41□□□□□ -1.7
PUM1-207ENST00000440538 PAX4O43316 350 aa4.41□□□□□ -1.7
PUM1-207ENST00000440538 MIFP14174 115 aa4.41□□□□□ -1.7
PUM1-207ENST00000440538 GYPEP15421 78 aa4.41□□□□□ -1.7
PUM1-207ENST00000440538 NDUFA12Q9UI09 145 aa4.41□□□□□ -1.7
PUM1-207ENST00000440538 TRAV16A0A0A6YYK6 109 aaPredicted RBP4.41□□□□□ -1.7
PUM1-207ENST00000440538 PLAC8L1A1L4L8 177 aa4.41□□□□□ -1.7
PUM1-207ENST00000440538 C20orf203Q8NBC4 194 aa4.41□□□□□ -1.7
PUM1-207ENST00000440538 TNFRSF18Q9Y5U5 241 aa4.41□□□□□ -1.7
PUM1-207ENST00000440538 NXPH4O95158 308 aa4.4□□□□□ -1.7
PUM1-207ENST00000440538 ATP5G1P05496 136 aa4.4□□□□□ -1.7
PUM1-207ENST00000440538 C9orf85Q96MD7 179 aa4.4□□□□□ -1.7
PUM1-207ENST00000440538 B9D2Q9BPU9 175 aa4.4□□□□□ -1.7
PUM1-207ENST00000440538 PPP1R17O96001 155 aa4.4□□□□□ -1.7
PUM1-207ENST00000440538 CLPSL2Q6UWE3 100 aa4.4□□□□□ -1.7
PUM1-207ENST00000440538 Q6Q795 121 aa4.4□□□□□ -1.71
PUM1-207ENST00000440538 LST1O00453 97 aa4.39□□□□□ -1.71
PUM1-207ENST00000440538 A8MTW9 85 aa4.39□□□□□ -1.71
PUM1-207ENST00000440538 KRTAP21-3Q3LHN1 58 aa4.39□□□□□ -1.71
PUM1-207ENST00000440538 KPRPQ5T749 579 aaPredicted RBP4.39□□□□□ -1.71
PUM1-207ENST00000440538 C9orf153Q5TBE3 101 aa4.39□□□□□ -1.71
PUM1-207ENST00000440538 TM2D3Q9BRN9 247 aa4.39□□□□□ -1.71
PUM1-207ENST00000440538 CYSTM1Q9H1C7 97 aa4.39□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 66.5 ms