RNA–Protein interactions for RNA: ENST00000438571.5

GTF3A-204, Transcript of general transcription factor IIIA, humanhuman

TSL 5

Gene GTF3A, Length 792 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3A-204ENST00000438571 FAM168BA1KXE4 195 aa11.09□□□□□ -0.63
GTF3A-204ENST00000438571 MT-ND6P03923 174 aa11.09□□□□□ -0.63
GTF3A-204ENST00000438571 SMAGPQ0VAQ4 97 aa11.09□□□□□ -0.63
GTF3A-204ENST00000438571 C1orf137Q5JT78 98 aa11.09□□□□□ -0.63
GTF3A-204ENST00000438571 C10orf25Q5T742 122 aa11.09□□□□□ -0.63
GTF3A-204ENST00000438571 ORAOV1Q8WV07 137 aa11.09□□□□□ -0.63
GTF3A-204ENST00000438571 TRBV24-1A0A075B6N3 115 aa11.08□□□□□ -0.64
GTF3A-204ENST00000438571 LINC00862A6NCI5 91 aa11.08□□□□□ -0.64
GTF3A-204ENST00000438571 TNFRSF6BO95407 300 aa11.08□□□□□ -0.64
GTF3A-204ENST00000438571 NPYP01303 97 aa11.08□□□□□ -0.64
GTF3A-204ENST00000438571 CKS2P33552 79 aa11.08□□□□□ -0.64
GTF3A-204ENST00000438571 MRPL54Q6P161 138 aaKnown RBP11.08□□□□□ -0.64
GTF3A-204ENST00000438571 C20orf78Q9BR46 151 aa11.08□□□□□ -0.64
GTF3A-204ENST00000438571 SMIM2Q9BVW6 85 aa11.08□□□□□ -0.64
GTF3A-204ENST00000438571 IGHV3OR16-9A0A0B4J2B5 98 aa11.07□□□□□ -0.64
GTF3A-204ENST00000438571 D6R8Y8 96 aa11.07□□□□□ -0.64
GTF3A-204ENST00000438571 TCAPO15273 167 aa11.07□□□□□ -0.64
GTF3A-204ENST00000438571 COMMD7Q86VX2 200 aa11.07□□□□□ -0.64
GTF3A-204ENST00000438571 OR10D4PQ8NGN7 298 aa11.07□□□□□ -0.64
GTF3A-204ENST00000438571 TMEM18Q96B42 140 aa11.07□□□□□ -0.64
GTF3A-204ENST00000438571 RPL32P62910 135 aaKnown RBP11.06□□□□□ -0.64
GTF3A-204ENST00000438571 MRPL35Q9NZE8 188 aaKnown RBP11.06□□□□□ -0.64
GTF3A-204ENST00000438571 C6orf48Q9UBA6 75 aa11.06□□□□□ -0.64
GTF3A-204ENST00000438571 NAT8Q9UHE5 227 aa11.06□□□□□ -0.64
GTF3A-204ENST00000438571 PEA15Q15121 130 aa11.05□□□□□ -0.64
GTF3A-204ENST00000438571 RNF151Q2KHN1 245 aa11.05□□□□□ -0.64
GTF3A-204ENST00000438571 UNQ6190/PRO20217Q6UXQ8 127 aa11.05□□□□□ -0.64
GTF3A-204ENST00000438571 A0A1B0GXF2 115 aa11.04□□□□□ -0.64
GTF3A-204ENST00000438571 IFITM10A6NMD0 228 aa11.04□□□□□ -0.64
GTF3A-204ENST00000438571 KRTAP7-1Q8IUC3 87 aa11.04□□□□□ -0.64
GTF3A-204ENST00000438571 NDUFA1O15239 70 aa11.03□□□□□ -0.64
GTF3A-204ENST00000438571 FAM19A5Q7Z5A7 132 aaPredicted RBP11.03□□□□□ -0.64
GTF3A-204ENST00000438571 SLC7A5P1Q8MH63 180 aa11.03□□□□□ -0.64
GTF3A-204ENST00000438571 PRR26Q8N8Z3 221 aa11.03□□□□□ -0.64
GTF3A-204ENST00000438571 SPANXA1Q9NS26 97 aa11.03□□□□□ -0.64
GTF3A-204ENST00000438571 IGLV7-43P04211 117 aa11.02□□□□□ -0.65
GTF3A-204ENST00000438571 HBBP68871 147 aa11.02□□□□□ -0.65
GTF3A-204ENST00000438571 MRPS36P82909 103 aaKnown RBP11.02□□□□□ -0.65
GTF3A-204ENST00000438571 KIAA0087Q14695 138 aa11.01□□□□□ -0.65
GTF3A-204ENST00000438571 GAGE2EQ4V326 116 aa11.01□□□□□ -0.65
GTF3A-204ENST00000438571 GAGE2DQ9UEU5 116 aa11.01□□□□□ -0.65
GTF3A-204ENST00000438571 A0A1B0GW15 77 aa11□□□□□ -0.65
GTF3A-204ENST00000438571 TLX1NBP0CAT3 122 aa11□□□□□ -0.65
GTF3A-204ENST00000438571 A0A087WZ39 114 aa10.99□□□□□ -0.65
GTF3A-204ENST00000438571 IMMP2LQ96T52 175 aa10.99□□□□□ -0.65
GTF3A-204ENST00000438571 SMDT1Q9H4I9 107 aa10.99□□□□□ -0.65
GTF3A-204ENST00000438571 IGLV4-3A0A075B6K6 122 aa10.98□□□□□ -0.65
GTF3A-204ENST00000438571 H0Y9J4 135 aa10.98□□□□□ -0.65
GTF3A-204ENST00000438571 LINC00242Q5T6M2 205 aa10.98□□□□□ -0.65
GTF3A-204ENST00000438571 ZC2HC1BQ5TFG8 222 aa10.98□□□□□ -0.65
GTF3A-204ENST00000438571 UQCC3Q6UW78 93 aa10.98□□□□□ -0.65
GTF3A-204ENST00000438571 F8W036 122 aa10.97□□□□□ -0.65
GTF3A-204ENST00000438571 F8WDY8 70 aa10.97□□□□□ -0.65
GTF3A-204ENST00000438571 C2orf82Q6UX34 121 aa10.97□□□□□ -0.65
GTF3A-204ENST00000438571 DIRC1Q969H9 104 aa10.97□□□□□ -0.65
GTF3A-204ENST00000438571 TGIF2-C20orf24A0A0A6YYL0 155 aa10.96□□□□□ -0.65
GTF3A-204ENST00000438571 TMEM218A2RU14 115 aa10.96□□□□□ -0.65
GTF3A-204ENST00000438571 KRTAP1-4P0C5Y4 121 aa10.96□□□□□ -0.65
GTF3A-204ENST00000438571 IFI27P40305 119 aaPredicted RBP10.96□□□□□ -0.65
GTF3A-204ENST00000438571 M0QXV9 152 aa10.95□□□□□ -0.66
GTF3A-204ENST00000438571 S100A8P05109 93 aa10.95□□□□□ -0.66
GTF3A-204ENST00000438571 ADCYAP1P18509 176 aa10.95□□□□□ -0.66
GTF3A-204ENST00000438571 C9orf129Q5T035 196 aaKnown RBP10.95□□□□□ -0.66
GTF3A-204ENST00000438571 ORMDL3Q8N138 153 aa10.95□□□□□ -0.66
GTF3A-204ENST00000438571 PRELID3AQ96N28 172 aa10.95□□□□□ -0.66
GTF3A-204ENST00000438571 PPBPP02775 128 aa10.94□□□□□ -0.66
GTF3A-204ENST00000438571 TMEM136Q6ZRR5 245 aa10.94□□□□□ -0.66
GTF3A-204ENST00000438571 LOC389332A0A1B0GUA5 103 aa10.93□□□□□ -0.66
GTF3A-204ENST00000438571 LINC00173Q6ZV60 143 aa10.93□□□□□ -0.66
GTF3A-204ENST00000438571 TMEM141Q96I45 108 aa10.93□□□□□ -0.66
GTF3A-204ENST00000438571 PYGO1Q9Y3Y4 419 aa10.93□□□□□ -0.66
GTF3A-204ENST00000438571 RAB5AP20339 215 aa10.92□□□□□ -0.66
GTF3A-204ENST00000438571 UBE2D1P51668 147 aa10.92□□□□□ -0.66
GTF3A-204ENST00000438571 UBE2BP63146 152 aa10.92□□□□□ -0.66
GTF3A-204ENST00000438571 NDUFA5Q16718 116 aa10.92□□□□□ -0.66
GTF3A-204ENST00000438571 TRBV30A0A0K0K1B3 111 aa10.91□□□□□ -0.66
GTF3A-204ENST00000438571 NDUFC2-KCTD14E9PQ53 114 aa10.9□□□□□ -0.66
GTF3A-204ENST00000438571 TEX43Q6ZNM6 134 aa10.9□□□□□ -0.66
GTF3A-204ENST00000438571 ATP5L2Q7Z4Y8 100 aa10.9□□□□□ -0.66
GTF3A-204ENST00000438571 PRSS47A8MTI9 375 aa10.88□□□□□ -0.67
GTF3A-204ENST00000438571 C10orf91Q5T1B1 145 aa10.88□□□□□ -0.67
GTF3A-204ENST00000438571 C2orf66Q6UXQ4 117 aa10.88□□□□□ -0.67
GTF3A-204ENST00000438571 LINC00469Q8N7U9 141 aa10.88□□□□□ -0.67
GTF3A-204ENST00000438571 SEC11CQ9BY50 192 aa10.88□□□□□ -0.67
GTF3A-204ENST00000438571 IGLV1-50A0A075B6I6 118 aa10.87□□□□□ -0.67
GTF3A-204ENST00000438571 PACRGQ96M98 296 aaPredicted RBP10.87□□□□□ -0.67
GTF3A-204ENST00000438571 AMELXQ99217 191 aa10.87□□□□□ -0.67
GTF3A-204ENST00000438571 MAP1LC3AQ9H492 121 aa10.87□□□□□ -0.67
GTF3A-204ENST00000438571 TOMM7Q9P0U1 55 aa10.87□□□□□ -0.67
GTF3A-204ENST00000438571 Q8N8P6 123 aa10.86□□□□□ -0.67
GTF3A-204ENST00000438571 CYSLTR1Q9Y271 337 aa10.86□□□□□ -0.67
GTF3A-204ENST00000438571 CARHSP1Q9Y2V2 147 aaKnown RBP10.86□□□□□ -0.67
GTF3A-204ENST00000438571 LINC01561Q8N1V8 128 aa10.85□□□□□ -0.67
GTF3A-204ENST00000438571 C2orf88Q9BSF0 95 aa10.85□□□□□ -0.67
GTF3A-204ENST00000438571 LAMTOR2Q9Y2Q5 125 aa10.84□□□□□ -0.67
GTF3A-204ENST00000438571 MUC2Q02817 5179 aa10.83□□□□□ -0.68
GTF3A-204ENST00000438571 APOC3P02656 99 aa10.83□□□□□ -0.68
GTF3A-204ENST00000438571 XAGE1AQ9HD64 81 aa10.83□□□□□ -0.68
GTF3A-204ENST00000438571 IGIPA6NJ69 53 aa10.82□□□□□ -0.68
GTF3A-204ENST00000438571 Q6ZN92 141 aa10.82□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 53.5 ms