RNA–Protein interactions for RNA: ENST00000437813.7

TNFRSF1A-203, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 5

Gene TNFRSF1A, Length 634 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-203ENST00000437813 SMAGPQ0VAQ4 97 aa8.84□□□□□ -0.99
TNFRSF1A-203ENST00000437813 GAGE2BQ13066 116 aa8.84□□□□□ -0.99
TNFRSF1A-203ENST00000437813 ADIRFQ15847 76 aa8.84□□□□□ -0.99
TNFRSF1A-203ENST00000437813 CAMK2N2Q96S95 79 aa8.84□□□□□ -0.99
TNFRSF1A-203ENST00000437813 SMIM2Q9BVW6 85 aa8.84□□□□□ -0.99
TNFRSF1A-203ENST00000437813 NPYP01303 97 aa8.83□□□□□ -1
TNFRSF1A-203ENST00000437813 MRPS36P82909 103 aaKnown RBP8.83□□□□□ -1
TNFRSF1A-203ENST00000437813 C9orf116Q5BN46 136 aaPredicted RBP8.83□□□□□ -1
TNFRSF1A-203ENST00000437813 REG3GQ6UW15 175 aa8.83□□□□□ -1
TNFRSF1A-203ENST00000437813 OR10D4PQ8NGN7 298 aa8.83□□□□□ -1
TNFRSF1A-203ENST00000437813 OPRPNQ99935 248 aaPredicted RBP8.83□□□□□ -1
TNFRSF1A-203ENST00000437813 SPANXA1Q9NS26 97 aa8.82□□□□□ -1
TNFRSF1A-203ENST00000437813 MRPL35Q9NZE8 188 aaKnown RBP8.82□□□□□ -1
TNFRSF1A-203ENST00000437813 PSORS1C2Q9UIG4 136 aa8.82□□□□□ -1
TNFRSF1A-203ENST00000437813 D6R8Y8 96 aa8.81□□□□□ -1
TNFRSF1A-203ENST00000437813 TCAPO15273 167 aa8.81□□□□□ -1
TNFRSF1A-203ENST00000437813 CKS2P33552 79 aa8.81□□□□□ -1
TNFRSF1A-203ENST00000437813 SPAG11BQ08648 103 aa8.81□□□□□ -1
TNFRSF1A-203ENST00000437813 C10orf25Q5T742 122 aa8.81□□□□□ -1
TNFRSF1A-203ENST00000437813 TMEM18Q96B42 140 aa8.81□□□□□ -1
TNFRSF1A-203ENST00000437813 SMDT1Q9H4I9 107 aa8.81□□□□□ -1
TNFRSF1A-203ENST00000437813 F8WDY8 70 aa8.8□□□□□ -1
TNFRSF1A-203ENST00000437813 HBBP68871 147 aa8.8□□□□□ -1
TNFRSF1A-203ENST00000437813 KRTAP11-1Q8IUC1 163 aa8.8□□□□□ -1
TNFRSF1A-203ENST00000437813 KRTAP7-1Q8IUC3 87 aa8.8□□□□□ -1
TNFRSF1A-203ENST00000437813 TLX1NBP0CAT3 122 aa8.79□□□□□ -1
TNFRSF1A-203ENST00000437813 LORP23490 312 aaPredicted RBP8.79□□□□□ -1
TNFRSF1A-203ENST00000437813 KIAA0087Q14695 138 aa8.79□□□□□ -1
TNFRSF1A-203ENST00000437813 MRPL54Q6P161 138 aaKnown RBP8.79□□□□□ -1
TNFRSF1A-203ENST00000437813 PHF5AQ7RTV0 110 aaKnown RBP8.79□□□□□ -1
TNFRSF1A-203ENST00000437813 PPBPP02775 128 aa8.78□□□□□ -1
TNFRSF1A-203ENST00000437813 PEA15Q15121 130 aa8.78□□□□□ -1
TNFRSF1A-203ENST00000437813 ORAOV1Q8WV07 137 aa8.78□□□□□ -1
TNFRSF1A-203ENST00000437813 PRSS47A8MTI9 375 aa8.77□□□□□ -1.01
TNFRSF1A-203ENST00000437813 RPL18AQ02543 176 aaKnown RBP8.77□□□□□ -1.01
TNFRSF1A-203ENST00000437813 UNQ6190/PRO20217Q6UXQ8 127 aa8.77□□□□□ -1.01
TNFRSF1A-203ENST00000437813 C6orf48Q9UBA6 75 aa8.77□□□□□ -1.01
TNFRSF1A-203ENST00000437813 PYGO1Q9Y3Y4 419 aa8.77□□□□□ -1.01
TNFRSF1A-203ENST00000437813 A0A087WZ39 114 aa8.76□□□□□ -1.01
TNFRSF1A-203ENST00000437813 FAM168BA1KXE4 195 aa8.76□□□□□ -1.01
TNFRSF1A-203ENST00000437813 F8W036 122 aa8.76□□□□□ -1.01
TNFRSF1A-203ENST00000437813 S100A8P05109 93 aa8.76□□□□□ -1.01
TNFRSF1A-203ENST00000437813 LINC00242Q5T6M2 205 aa8.76□□□□□ -1.01
TNFRSF1A-203ENST00000437813 IGLV4-3A0A075B6K6 122 aa8.75□□□□□ -1.01
TNFRSF1A-203ENST00000437813 IFITM10A6NMD0 228 aa8.75□□□□□ -1.01
TNFRSF1A-203ENST00000437813 NDUFA1O15239 70 aa8.75□□□□□ -1.01
TNFRSF1A-203ENST00000437813 ATP5L2Q7Z4Y8 100 aa8.75□□□□□ -1.01
TNFRSF1A-203ENST00000437813 MT-ND6P03923 174 aa8.74□□□□□ -1.01
TNFRSF1A-203ENST00000437813 LINC00173Q6ZV60 143 aa8.74□□□□□ -1.01
TNFRSF1A-203ENST00000437813 ORMDL3Q8N138 153 aa8.74□□□□□ -1.01
TNFRSF1A-203ENST00000437813 IMMP2LQ96T52 175 aa8.74□□□□□ -1.01
TNFRSF1A-203ENST00000437813 IGLV7-43P04211 117 aa8.73□□□□□ -1.01
TNFRSF1A-203ENST00000437813 C1orf137Q5JT78 98 aa8.73□□□□□ -1.01
TNFRSF1A-203ENST00000437813 TMEM136Q6ZRR5 245 aa8.73□□□□□ -1.01
TNFRSF1A-203ENST00000437813 PRELID3AQ96N28 172 aa8.73□□□□□ -1.01
TNFRSF1A-203ENST00000437813 KRTAP1-4P0C5Y4 121 aa8.72□□□□□ -1.01
TNFRSF1A-203ENST00000437813 IFI27P40305 119 aaPredicted RBP8.71□□□□□ -1.02
TNFRSF1A-203ENST00000437813 UBE2D1P51668 147 aa8.71□□□□□ -1.02
TNFRSF1A-203ENST00000437813 TMEM141Q96I45 108 aa8.71□□□□□ -1.02
TNFRSF1A-203ENST00000437813 TGIF2-C20orf24A0A0A6YYL0 155 aa8.7□□□□□ -1.02
TNFRSF1A-203ENST00000437813 H0Y9J4 135 aa8.7□□□□□ -1.02
TNFRSF1A-203ENST00000437813 C2orf82Q6UX34 121 aa8.7□□□□□ -1.02
TNFRSF1A-203ENST00000437813 LINC01561Q8N1V8 128 aa8.7□□□□□ -1.02
TNFRSF1A-203ENST00000437813 AMELXQ99217 191 aa8.7□□□□□ -1.02
TNFRSF1A-203ENST00000437813 LAMTOR2Q9Y2Q5 125 aa8.7□□□□□ -1.02
TNFRSF1A-203ENST00000437813 TRBV30A0A0K0K1B3 111 aa8.69□□□□□ -1.02
TNFRSF1A-203ENST00000437813 RAB5AP20339 215 aa8.69□□□□□ -1.02
TNFRSF1A-203ENST00000437813 C9orf129Q5T035 196 aaKnown RBP8.69□□□□□ -1.02
TNFRSF1A-203ENST00000437813 FAM19A3Q7Z5A8 133 aa8.69□□□□□ -1.02
TNFRSF1A-203ENST00000437813 PRR26Q8N8Z3 221 aa8.69□□□□□ -1.02
TNFRSF1A-203ENST00000437813 DIRC1Q969H9 104 aa8.69□□□□□ -1.02
TNFRSF1A-203ENST00000437813 IGIPA6NJ69 53 aa8.68□□□□□ -1.02
TNFRSF1A-203ENST00000437813 ZC2HC1BQ5TFG8 222 aa8.68□□□□□ -1.02
TNFRSF1A-203ENST00000437813 FAM19A5Q7Z5A7 132 aaPredicted RBP8.68□□□□□ -1.02
TNFRSF1A-203ENST00000437813 Q8N8P6 123 aa8.68□□□□□ -1.02
TNFRSF1A-203ENST00000437813 NDUFC2-KCTD14E9PQ53 114 aa8.67□□□□□ -1.02
TNFRSF1A-203ENST00000437813 NPSP0C0P6 89 aa8.67□□□□□ -1.02
TNFRSF1A-203ENST00000437813 GAGE2EQ4V326 116 aa8.67□□□□□ -1.02
TNFRSF1A-203ENST00000437813 GAGE2DQ9UEU5 116 aa8.67□□□□□ -1.02
TNFRSF1A-203ENST00000437813 M0QXV9 152 aa8.66□□□□□ -1.02
TNFRSF1A-203ENST00000437813 PNRC1Q12796 327 aaPredicted RBP8.66□□□□□ -1.02
TNFRSF1A-203ENST00000437813 C2orf66Q6UXQ4 117 aa8.66□□□□□ -1.02
TNFRSF1A-203ENST00000437813 TEX43Q6ZNM6 134 aa8.66□□□□□ -1.02
TNFRSF1A-203ENST00000437813 MAP1LC3AQ9H492 121 aa8.66□□□□□ -1.02
TNFRSF1A-203ENST00000437813 CYSLTR1Q9Y271 337 aa8.66□□□□□ -1.02
TNFRSF1A-203ENST00000437813 LPAP08519 4548 aa8.66□□□□□ -1.02
TNFRSF1A-203ENST00000437813 LOC389332A0A1B0GUA5 103 aa8.65□□□□□ -1.02
TNFRSF1A-203ENST00000437813 K7EMI3 77 aa8.64□□□□□ -1.03
TNFRSF1A-203ENST00000437813 ANAPC16Q96DE5 110 aa8.64□□□□□ -1.03
TNFRSF1A-203ENST00000437813 IGLV1-50A0A075B6I6 118 aa8.63□□□□□ -1.03
TNFRSF1A-203ENST00000437813 MT-ND4LP03901 98 aa8.62□□□□□ -1.03
TNFRSF1A-203ENST00000437813 Q8IZM0 81 aa8.62□□□□□ -1.03
TNFRSF1A-203ENST00000437813 ORMDL2Q53FV1 153 aa8.61□□□□□ -1.03
TNFRSF1A-203ENST00000437813 Q6ZN92 141 aa8.61□□□□□ -1.03
TNFRSF1A-203ENST00000437813 PACRGQ96M98 296 aaPredicted RBP8.61□□□□□ -1.03
TNFRSF1A-203ENST00000437813 C2orf88Q9BSF0 95 aa8.61□□□□□ -1.03
TNFRSF1A-203ENST00000437813 VCX2Q9H322 139 aa8.61□□□□□ -1.03
TNFRSF1A-203ENST00000437813 CDKN2A-AS1Q9UH64 79 aa8.61□□□□□ -1.03
TNFRSF1A-203ENST00000437813 NXT2Q9NPJ8 142 aaKnown RBP8.6□□□□□ -1.03
TNFRSF1A-203ENST00000437813 TOMM6Q96B49 74 aa8.59□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 73.9 ms