RNA–Protein interactions for RNA: ENST00000434418.2

LINC01090-202, Transcript of long intergenic non-protein coding RNA 1090, humanhuman

TSL 5 BASIC

Gene LINC01090, Length 560 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01090-202ENST00000434418 H7C423 109 aa6.21□□□□□ -1.42
LINC01090-202ENST00000434418 CCL25O15444 150 aa6.21□□□□□ -1.42
LINC01090-202ENST00000434418 NDUFS6O75380 124 aaKnown RBP6.21□□□□□ -1.42
LINC01090-202ENST00000434418 TEX261Q6UWH6 196 aa6.21□□□□□ -1.42
LINC01090-202ENST00000434418 Q6ZRU5 148 aa6.21□□□□□ -1.42
LINC01090-202ENST00000434418 OR5A1Q8NGJ0 315 aa6.21□□□□□ -1.42
LINC01090-202ENST00000434418 LYPD6BQ8NI32 183 aa6.21□□□□□ -1.42
LINC01090-202ENST00000434418 TMEM101Q96IK0 257 aa6.21□□□□□ -1.42
LINC01090-202ENST00000434418 SMIM7Q9BQ49 75 aa6.21□□□□□ -1.42
LINC01090-202ENST00000434418 ST20Q9HBF5 79 aa6.21□□□□□ -1.42
LINC01090-202ENST00000434418 FAT3Q8TDW7 4589 aa6.2□□□□□ -1.42
LINC01090-202ENST00000434418 TRBV6-5A0A0K0K1A5 114 aa6.2□□□□□ -1.42
LINC01090-202ENST00000434418 LINC00959A0A1B0GUT2 108 aa6.2□□□□□ -1.42
LINC01090-202ENST00000434418 HIGD1CA8MV81 97 aa6.2□□□□□ -1.42
LINC01090-202ENST00000434418 SMKR1H3BMG3 65 aa6.2□□□□□ -1.42
LINC01090-202ENST00000434418 ZNF25P17030 456 aaPredicted RBP6.2□□□□□ -1.42
LINC01090-202ENST00000434418 LINC01551Q86U37 167 aa6.2□□□□□ -1.42
LINC01090-202ENST00000434418 AMN1Q8IY45 258 aa6.2□□□□□ -1.42
LINC01090-202ENST00000434418 C7orf33Q8WU49 177 aa6.2□□□□□ -1.42
LINC01090-202ENST00000434418 MRAP2Q96G30 205 aa6.2□□□□□ -1.42
LINC01090-202ENST00000434418 BTF3L4Q96K17 158 aa6.2□□□□□ -1.42
LINC01090-202ENST00000434418 OPRPNQ99935 248 aaPredicted RBP6.2□□□□□ -1.42
LINC01090-202ENST00000434418 EIF5A2Q9GZV4 153 aaKnown RBP6.2□□□□□ -1.42
LINC01090-202ENST00000434418 A0A1B0GUT8 65 aa6.19□□□□□ -1.42
LINC01090-202ENST00000434418 ESDP10768 282 aa6.19□□□□□ -1.42
LINC01090-202ENST00000434418 RAB4AP20338 218 aa6.19□□□□□ -1.42
LINC01090-202ENST00000434418 PRR3P79522 188 aaKnown RBP6.19□□□□□ -1.42
LINC01090-202ENST00000434418 TSKUQ8WUA8 353 aa6.19□□□□□ -1.42
LINC01090-202ENST00000434418 UBR4Q5T4S7 5183 aa6.19□□□□□ -1.42
LINC01090-202ENST00000434418 PKHD1L1Q86WI1 4243 aa6.18□□□□□ -1.42
LINC01090-202ENST00000434418 ZNF727A8MUV8 499 aa6.18□□□□□ -1.42
LINC01090-202ENST00000434418 RNASE13Q5GAN3 156 aaKnown RBP6.18□□□□□ -1.42
LINC01090-202ENST00000434418 CARD19Q96LW7 228 aa6.18□□□□□ -1.42
LINC01090-202ENST00000434418 TMEM191AQ9H0A3 160 aa6.18□□□□□ -1.42
LINC01090-202ENST00000434418 IGHV1-58A0A0C4DH39 117 aa6.17□□□□□ -1.42
LINC01090-202ENST00000434418 C7orf77A4D0Y5 90 aa6.17□□□□□ -1.42
LINC01090-202ENST00000434418 POLR2KP53803 58 aaKnown RBP6.17□□□□□ -1.42
LINC01090-202ENST00000434418 SS18Q15532 418 aa6.17□□□□□ -1.42
LINC01090-202ENST00000434418 ZNF664Q8N3J9 261 aa6.17□□□□□ -1.42
LINC01090-202ENST00000434418 CDC42SE2Q9NRR3 84 aa6.17□□□□□ -1.42
LINC01090-202ENST00000434418 TRBV27A0A0K0K1C4 114 aa6.16□□□□□ -1.42
LINC01090-202ENST00000434418 SRP19P09132 144 aaKnown RBP6.16□□□□□ -1.42
LINC01090-202ENST00000434418 FCER1GP30273 86 aa6.16□□□□□ -1.42
LINC01090-202ENST00000434418 Q6ZRP5 223 aa6.16□□□□□ -1.42
LINC01090-202ENST00000434418 MRPL52Q86TS9 123 aaKnown RBP6.16□□□□□ -1.42
LINC01090-202ENST00000434418 FAM210AQ96ND0 272 aa6.16□□□□□ -1.42
LINC01090-202ENST00000434418 OSTCQ9NRP0 149 aa6.16□□□□□ -1.42
LINC01090-202ENST00000434418 V9GYV3 84 aa6.16□□□□□ -1.42
LINC01090-202ENST00000434418 KRTAP16-1A8MUX0 517 aa6.15□□□□□ -1.42
LINC01090-202ENST00000434418 SYCNQ0VAF6 134 aa6.15□□□□□ -1.42
LINC01090-202ENST00000434418 CD164L2Q6UWJ8 174 aa6.15□□□□□ -1.42
LINC01090-202ENST00000434418 NUP35Q8NFH5 326 aa6.15□□□□□ -1.42
LINC01090-202ENST00000434418 IGLV4-69A0A075B6H9 119 aa6.14□□□□□ -1.43
LINC01090-202ENST00000434418 TRAV13-1A0A0B4J241 112 aa6.14□□□□□ -1.43
LINC01090-202ENST00000434418 NDUFAF8A1L188 74 aa6.14□□□□□ -1.43
LINC01090-202ENST00000434418 RIGQ13278 110 aa6.14□□□□□ -1.43
LINC01090-202ENST00000434418 ADIRFQ15847 76 aa6.14□□□□□ -1.43
LINC01090-202ENST00000434418 Q6ZUT4 128 aa6.14□□□□□ -1.43
LINC01090-202ENST00000434418 ISOC2Q96AB3 205 aa6.14□□□□□ -1.43
LINC01090-202ENST00000434418 LINC00474Q9P2X8 69 aa6.14□□□□□ -1.43
LINC01090-202ENST00000434418 UBE2D4Q9Y2X8 147 aa6.14□□□□□ -1.43
LINC01090-202ENST00000434418 C9JQL5 133 aa6.13□□□□□ -1.43
LINC01090-202ENST00000434418 COX7A2LO14548 114 aa6.13□□□□□ -1.43
LINC01090-202ENST00000434418 RPL23P62829 140 aaKnown RBP6.13□□□□□ -1.43
LINC01090-202ENST00000434418 KIR2DL4Q99706 377 aa6.13□□□□□ -1.43
LINC01090-202ENST00000434418 NAT8BQ9UHF3 227 aa6.13□□□□□ -1.43
LINC01090-202ENST00000434418 C1orf196B1AJZ1 125 aa6.12□□□□□ -1.43
LINC01090-202ENST00000434418 TMEM241Q24JQ0 296 aa6.12□□□□□ -1.43
LINC01090-202ENST00000434418 MRPL51Q4U2R6 128 aaKnown RBP6.12□□□□□ -1.43
LINC01090-202ENST00000434418 LCE1EQ5T753 118 aa6.12□□□□□ -1.43
LINC01090-202ENST00000434418 C5orf38Q86SI9 138 aa6.12□□□□□ -1.43
LINC01090-202ENST00000434418 LINC01600Q96MT4 127 aa6.12□□□□□ -1.43
LINC01090-202ENST00000434418 CAMK2N2Q96S95 79 aa6.12□□□□□ -1.43
LINC01090-202ENST00000434418 PKIGQ9Y2B9 76 aa6.12□□□□□ -1.43
LINC01090-202ENST00000434418 LOC107984640A0A0U1RRK4 108 aa6.11□□□□□ -1.43
LINC01090-202ENST00000434418 A0A1B0GVG6 124 aa6.11□□□□□ -1.43
LINC01090-202ENST00000434418 PPP1R17O96001 155 aa6.11□□□□□ -1.43
LINC01090-202ENST00000434418 RPL39P62891 51 aaKnown RBP6.11□□□□□ -1.43
LINC01090-202ENST00000434418 FAM104BQ5XKR9 115 aa6.11□□□□□ -1.43
LINC01090-202ENST00000434418 CSDC2Q9Y534 153 aaKnown RBP6.11□□□□□ -1.43
LINC01090-202ENST00000434418 IGLV7-46A0A075B6I9 117 aa6.1□□□□□ -1.43
LINC01090-202ENST00000434418 A0A0J9YXV3 536 aa6.1□□□□□ -1.43
LINC01090-202ENST00000434418 A0A1W2PNN7 141 aa6.1□□□□□ -1.43
LINC01090-202ENST00000434418 SMIM27A0A1W2PRY6 76 aa6.1□□□□□ -1.43
LINC01090-202ENST00000434418 PPP1R2P9O14990 202 aa6.1□□□□□ -1.43
LINC01090-202ENST00000434418 APOMO95445 188 aa6.1□□□□□ -1.43
LINC01090-202ENST00000434418 RPL18AQ02543 176 aaKnown RBP6.1□□□□□ -1.43
LINC01090-202ENST00000434418 SPAG11BQ08648 103 aa6.1□□□□□ -1.43
LINC01090-202ENST00000434418 FAM74A3Q4VXF1 159 aa6.1□□□□□ -1.43
LINC01090-202ENST00000434418 KRTAP5-11Q6L8G4 156 aa6.1□□□□□ -1.43
LINC01090-202ENST00000434418 MRPL54Q6P161 138 aaKnown RBP6.1□□□□□ -1.43
LINC01090-202ENST00000434418 SPINK6Q6UWN8 80 aa6.1□□□□□ -1.43
LINC01090-202ENST00000434418 D6R8Y8 96 aa6.09□□□□□ -1.43
LINC01090-202ENST00000434418 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP6.09□□□□□ -1.43
LINC01090-202ENST00000434418 CKS2P33552 79 aa6.09□□□□□ -1.43
LINC01090-202ENST00000434418 SMAGPQ0VAQ4 97 aa6.09□□□□□ -1.43
LINC01090-202ENST00000434418 NAT8Q9UHE5 227 aa6.09□□□□□ -1.43
LINC01090-202ENST00000434418 TCAPO15273 167 aa6.08□□□□□ -1.44
LINC01090-202ENST00000434418 NPYP01303 97 aa6.08□□□□□ -1.44
LINC01090-202ENST00000434418 SRSF9Q13242 221 aaKnown RBP eCLIP6.08□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 172.5 ms