RNA–Protein interactions for RNA: ENST00000430038.5

CPSF4-203, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 5

Gene CPSF4, Length 735 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-203ENST00000430038 HBBP68871 147 aa10.51□□□□□ -0.73
CPSF4-203ENST00000430038 Q6ZRP5 223 aa10.51□□□□□ -0.73
CPSF4-203ENST00000430038 KRTAP11-1Q8IUC1 163 aa10.51□□□□□ -0.73
CPSF4-203ENST00000430038 A0A1B0GW15 77 aa10.5□□□□□ -0.73
CPSF4-203ENST00000430038 SPAG11BQ08648 103 aa10.5□□□□□ -0.73
CPSF4-203ENST00000430038 PHF5AQ7RTV0 110 aaKnown RBP10.5□□□□□ -0.73
CPSF4-203ENST00000430038 TMEM18Q96B42 140 aa10.49□□□□□ -0.73
CPSF4-203ENST00000430038 PSORS1C2Q9UIG4 136 aa10.49□□□□□ -0.73
CPSF4-203ENST00000430038 FAM168BA1KXE4 195 aa10.48□□□□□ -0.73
CPSF4-203ENST00000430038 MRPS36P82909 103 aaKnown RBP10.48□□□□□ -0.73
CPSF4-203ENST00000430038 RPL18AQ02543 176 aaKnown RBP10.48□□□□□ -0.73
CPSF4-203ENST00000430038 UNQ6190/PRO20217Q6UXQ8 127 aa10.48□□□□□ -0.73
CPSF4-203ENST00000430038 ORAOV1Q8WV07 137 aa10.48□□□□□ -0.73
CPSF4-203ENST00000430038 SMDT1Q9H4I9 107 aa10.48□□□□□ -0.73
CPSF4-203ENST00000430038 PKIGQ9Y2B9 76 aa10.48□□□□□ -0.73
CPSF4-203ENST00000430038 SMAGPQ0VAQ4 97 aa10.47□□□□□ -0.73
CPSF4-203ENST00000430038 RNF151Q2KHN1 245 aa10.47□□□□□ -0.73
CPSF4-203ENST00000430038 KRTAP7-1Q8IUC3 87 aa10.47□□□□□ -0.73
CPSF4-203ENST00000430038 SPANXA1Q9NS26 97 aa10.47□□□□□ -0.73
CPSF4-203ENST00000430038 KIAA0087Q14695 138 aa10.46□□□□□ -0.73
CPSF4-203ENST00000430038 ZC2HC1BQ5TFG8 222 aa10.46□□□□□ -0.73
CPSF4-203ENST00000430038 TMEM136Q6ZRR5 245 aa10.46□□□□□ -0.73
CPSF4-203ENST00000430038 OR10D4PQ8NGN7 298 aa10.46□□□□□ -0.73
CPSF4-203ENST00000430038 C6orf48Q9UBA6 75 aa10.46□□□□□ -0.73
CPSF4-203ENST00000430038 F8W036 122 aa10.45□□□□□ -0.74
CPSF4-203ENST00000430038 PRELID3AQ96N28 172 aa10.45□□□□□ -0.74
CPSF4-203ENST00000430038 MRPL35Q9NZE8 188 aaKnown RBP10.45□□□□□ -0.74
CPSF4-203ENST00000430038 IGLV4-3A0A075B6K6 122 aa10.44□□□□□ -0.74
CPSF4-203ENST00000430038 IFITM10A6NMD0 228 aa10.44□□□□□ -0.74
CPSF4-203ENST00000430038 PPBPP02775 128 aa10.44□□□□□ -0.74
CPSF4-203ENST00000430038 LINC00242Q5T6M2 205 aa10.44□□□□□ -0.74
CPSF4-203ENST00000430038 REG3GQ6UW15 175 aa10.44□□□□□ -0.74
CPSF4-203ENST00000430038 ORMDL3Q8N138 153 aa10.44□□□□□ -0.74
CPSF4-203ENST00000430038 PRSS47A8MTI9 375 aa10.43□□□□□ -0.74
CPSF4-203ENST00000430038 S100A8P05109 93 aa10.43□□□□□ -0.74
CPSF4-203ENST00000430038 LPAP08519 4548 aa10.42□□□□□ -0.74
CPSF4-203ENST00000430038 LOC389332A0A1B0GUA5 103 aa10.42□□□□□ -0.74
CPSF4-203ENST00000430038 PYGO1Q9Y3Y4 419 aa10.42□□□□□ -0.74
CPSF4-203ENST00000430038 A0A087WZ39 114 aa10.41□□□□□ -0.74
CPSF4-203ENST00000430038 C1orf137Q5JT78 98 aa10.41□□□□□ -0.74
CPSF4-203ENST00000430038 C2orf82Q6UX34 121 aa10.41□□□□□ -0.74
CPSF4-203ENST00000430038 LINC00173Q6ZV60 143 aa10.41□□□□□ -0.74
CPSF4-203ENST00000430038 ATP5L2Q7Z4Y8 100 aa10.41□□□□□ -0.74
CPSF4-203ENST00000430038 NDUFA1O15239 70 aa10.4□□□□□ -0.74
CPSF4-203ENST00000430038 MT-ND6P03923 174 aa10.4□□□□□ -0.74
CPSF4-203ENST00000430038 TLX1NBP0CAT3 122 aa10.4□□□□□ -0.74
CPSF4-203ENST00000430038 RAB5AP20339 215 aa10.39□□□□□ -0.75
CPSF4-203ENST00000430038 GAGE2EQ4V326 116 aa10.39□□□□□ -0.75
CPSF4-203ENST00000430038 GAGE2DQ9UEU5 116 aa10.39□□□□□ -0.75
CPSF4-203ENST00000430038 F8WDY8 70 aa10.38□□□□□ -0.75
CPSF4-203ENST00000430038 IFI27P40305 119 aaPredicted RBP10.38□□□□□ -0.75
CPSF4-203ENST00000430038 UBE2D1P51668 147 aa10.38□□□□□ -0.75
CPSF4-203ENST00000430038 TMEM141Q96I45 108 aa10.38□□□□□ -0.75
CPSF4-203ENST00000430038 IMMP2LQ96T52 175 aa10.38□□□□□ -0.75
CPSF4-203ENST00000430038 IGLV7-43P04211 117 aa10.37□□□□□ -0.75
CPSF4-203ENST00000430038 FAM19A5Q7Z5A7 132 aaPredicted RBP10.37□□□□□ -0.75
CPSF4-203ENST00000430038 TGIF2-C20orf24A0A0A6YYL0 155 aa10.36□□□□□ -0.75
CPSF4-203ENST00000430038 C9orf129Q5T035 196 aaKnown RBP10.36□□□□□ -0.75
CPSF4-203ENST00000430038 C2orf66Q6UXQ4 117 aa10.36□□□□□ -0.75
CPSF4-203ENST00000430038 Q8N8P6 123 aa10.36□□□□□ -0.75
CPSF4-203ENST00000430038 AMELXQ99217 191 aa10.36□□□□□ -0.75
CPSF4-203ENST00000430038 IGIPA6NJ69 53 aa10.35□□□□□ -0.75
CPSF4-203ENST00000430038 MAP1LC3AQ9H492 121 aa10.35□□□□□ -0.75
CPSF4-203ENST00000430038 PRR26Q8N8Z3 221 aa10.34□□□□□ -0.75
CPSF4-203ENST00000430038 ANAPC16Q96DE5 110 aa10.34□□□□□ -0.75
CPSF4-203ENST00000430038 LAMTOR2Q9Y2Q5 125 aa10.34□□□□□ -0.75
CPSF4-203ENST00000430038 TEX43Q6ZNM6 134 aa10.33□□□□□ -0.76
CPSF4-203ENST00000430038 MT-ND4LP03901 98 aa10.32□□□□□ -0.76
CPSF4-203ENST00000430038 PNRC1Q12796 327 aaPredicted RBP10.32□□□□□ -0.76
CPSF4-203ENST00000430038 CYSLTR1Q9Y271 337 aa10.32□□□□□ -0.76
CPSF4-203ENST00000430038 TRBV30A0A0K0K1B3 111 aa10.31□□□□□ -0.76
CPSF4-203ENST00000430038 KRTAP1-4P0C5Y4 121 aa10.31□□□□□ -0.76
CPSF4-203ENST00000430038 FAM19A3Q7Z5A8 133 aa10.31□□□□□ -0.76
CPSF4-203ENST00000430038 NDUFC2-KCTD14E9PQ53 114 aa10.3□□□□□ -0.76
CPSF4-203ENST00000430038 H0Y9J4 135 aa10.3□□□□□ -0.76
CPSF4-203ENST00000430038 ADCYAP1P18509 176 aa10.3□□□□□ -0.76
CPSF4-203ENST00000430038 KIAA1644Q3SXP7 199 aa10.3□□□□□ -0.76
CPSF4-203ENST00000430038 LINC01561Q8N1V8 128 aa10.3□□□□□ -0.76
CPSF4-203ENST00000430038 M0QXV9 152 aa10.29□□□□□ -0.76
CPSF4-203ENST00000430038 VCX2Q9H322 139 aa10.29□□□□□ -0.76
CPSF4-203ENST00000430038 LINC00469Q8N7U9 141 aa10.28□□□□□ -0.76
CPSF4-203ENST00000430038 DIRC1Q969H9 104 aa10.28□□□□□ -0.76
CPSF4-203ENST00000430038 TOMM7Q9P0U1 55 aa10.28□□□□□ -0.76
CPSF4-203ENST00000430038 CDKN2A-AS1Q9UH64 79 aa10.28□□□□□ -0.76
CPSF4-203ENST00000430038 ORMDL2Q53FV1 153 aa10.27□□□□□ -0.77
CPSF4-203ENST00000430038 Q6ZN92 141 aa10.27□□□□□ -0.77
CPSF4-203ENST00000430038 C2orf88Q9BSF0 95 aa10.27□□□□□ -0.77
CPSF4-203ENST00000430038 PACRGQ96M98 296 aaPredicted RBP10.26□□□□□ -0.77
CPSF4-203ENST00000430038 Q8IZM0 81 aa10.25□□□□□ -0.77
CPSF4-203ENST00000430038 TOMM6Q96B49 74 aa10.25□□□□□ -0.77
CPSF4-203ENST00000430038 CTDSP1Q9GZU7 261 aa10.25□□□□□ -0.77
CPSF4-203ENST00000430038 XAGE1AQ9HD64 81 aa10.25□□□□□ -0.77
CPSF4-203ENST00000430038 NPSP0C0P6 89 aa10.24□□□□□ -0.77
CPSF4-203ENST00000430038 UBE2BP63146 152 aa10.24□□□□□ -0.77
CPSF4-203ENST00000430038 IFITM2Q01629 132 aa10.24□□□□□ -0.77
CPSF4-203ENST00000430038 C6orf226Q5I0X4 101 aa10.24□□□□□ -0.77
CPSF4-203ENST00000430038 CLLU1Q5K131 121 aa10.24□□□□□ -0.77
CPSF4-203ENST00000430038 NXT2Q9NPJ8 142 aaKnown RBP10.24□□□□□ -0.77
CPSF4-203ENST00000430038 K7EMI3 77 aa10.23□□□□□ -0.77
CPSF4-203ENST00000430038 RAB14P61106 215 aa10.23□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 54.7 ms