RNA–Protein interactions for RNA: ENST00000428574.6

NR1I3-209, Transcript of nuclear receptor subfamily 1 group I member 3, humanhuman

TSL 1 (best) BASIC

Gene NR1I3, Length 1,117 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1I3-209ENST00000428574 HIGD1BQ9P298 99 aa6.2□□□□□ -1.42
NR1I3-209ENST00000428574 A0A087WZ39 114 aa6.19□□□□□ -1.42
NR1I3-209ENST00000428574 TRAV13-1A0A0B4J241 112 aa6.19□□□□□ -1.42
NR1I3-209ENST00000428574 IGHV3OR16-9A0A0B4J2B5 98 aa6.19□□□□□ -1.42
NR1I3-209ENST00000428574 IGHV1-58A0A0C4DH39 117 aa6.19□□□□□ -1.42
NR1I3-209ENST00000428574 ANGP03950 147 aaKnown RBP6.19□□□□□ -1.42
NR1I3-209ENST00000428574 REG3AQ06141 175 aa6.19□□□□□ -1.42
NR1I3-209ENST00000428574 MIAQ16674 131 aa6.19□□□□□ -1.42
NR1I3-209ENST00000428574 RNASE13Q5GAN3 156 aaKnown RBP6.19□□□□□ -1.42
NR1I3-209ENST00000428574 C10orf126Q8N4M7 172 aa6.19□□□□□ -1.42
NR1I3-209ENST00000428574 IGKV2D-26A0A0A0MRZ7 120 aa6.18□□□□□ -1.42
NR1I3-209ENST00000428574 IGLL5B9A064 214 aa6.18□□□□□ -1.42
NR1I3-209ENST00000428574 J3QQQ9 107 aa6.18□□□□□ -1.42
NR1I3-209ENST00000428574 HNRNPA3P51991 378 aaKnown RBP6.18□□□□□ -1.42
NR1I3-209ENST00000428574 TNP2Q05952 138 aa6.18□□□□□ -1.42
NR1I3-209ENST00000428574 CD164L2Q6UWJ8 174 aa6.18□□□□□ -1.42
NR1I3-209ENST00000428574 C14orf144Q96I85 54 aa6.18□□□□□ -1.42
NR1I3-209ENST00000428574 CDKN2A-AS1Q9UH64 79 aa6.18□□□□□ -1.42
NR1I3-209ENST00000428574 DNAH9Q9NYC9 4486 aa6.18□□□□□ -1.42
NR1I3-209ENST00000428574 MEGF8Q7Z7M0 2845 aa6.18□□□□□ -1.42
NR1I3-209ENST00000428574 MYMXA0A1B0GTQ4 84 aa6.17□□□□□ -1.42
NR1I3-209ENST00000428574 PCP4L1A6NKN8 68 aa6.17□□□□□ -1.42
NR1I3-209ENST00000428574 SMIM1B2RUZ4 78 aa6.17□□□□□ -1.42
NR1I3-209ENST00000428574 CRPP02741 224 aa6.17□□□□□ -1.42
NR1I3-209ENST00000428574 IGHV3-30-3P0DP02 117 aa6.17□□□□□ -1.42
NR1I3-209ENST00000428574 LGALS3P17931 250 aaKnown RBP6.17□□□□□ -1.42
NR1I3-209ENST00000428574 PCP4P48539 62 aa6.17□□□□□ -1.42
NR1I3-209ENST00000428574 ZFAND6Q6FIF0 208 aa6.17□□□□□ -1.42
NR1I3-209ENST00000428574 WFDC10BQ8IUB3 73 aa6.17□□□□□ -1.42
NR1I3-209ENST00000428574 LINC00269Q8N2A0 174 aa6.17□□□□□ -1.42
NR1I3-209ENST00000428574 TAL2Q16559 108 aa6.16□□□□□ -1.42
NR1I3-209ENST00000428574 LBHQ53QV2 105 aaPredicted RBP6.16□□□□□ -1.42
NR1I3-209ENST00000428574 APLNQ9ULZ1 77 aa6.16□□□□□ -1.42
NR1I3-209ENST00000428574 LINC00588Q9Y4M8 146 aa6.16□□□□□ -1.42
NR1I3-209ENST00000428574 STAB2Q8WWQ8 2551 aa6.16□□□□□ -1.42
NR1I3-209ENST00000428574 TRAV8-3A0A0A6YYJ7 113 aa6.15□□□□□ -1.42
NR1I3-209ENST00000428574 ZNF815PA8K554 130 aa6.15□□□□□ -1.42
NR1I3-209ENST00000428574 M0R143 59 aa6.15□□□□□ -1.42
NR1I3-209ENST00000428574 HERV-K104P63124 156 aa6.15□□□□□ -1.42
NR1I3-209ENST00000428574 COX6A2Q02221 97 aa6.15□□□□□ -1.42
NR1I3-209ENST00000428574 C2orf91Q6ZV80 131 aa6.15□□□□□ -1.42
NR1I3-209ENST00000428574 PCP2Q8IVA1 136 aa6.15□□□□□ -1.42
NR1I3-209ENST00000428574 CHCHD10Q8WYQ3 142 aaPredicted RBP6.15□□□□□ -1.42
NR1I3-209ENST00000428574 KLK12Q9UKR0 248 aa6.15□□□□□ -1.42
NR1I3-209ENST00000428574 LINC00587B1AMM8 73 aa6.14□□□□□ -1.43
NR1I3-209ENST00000428574 COX7A2LO14548 114 aa6.14□□□□□ -1.43
NR1I3-209ENST00000428574 NDUFA1O15239 70 aa6.14□□□□□ -1.43
NR1I3-209ENST00000428574 TIMM17BO60830 172 aa6.14□□□□□ -1.43
NR1I3-209ENST00000428574 GCSHP23434 173 aa6.14□□□□□ -1.43
NR1I3-209ENST00000428574 CXCL5P42830 114 aa6.14□□□□□ -1.43
NR1I3-209ENST00000428574 HSD52Q0P140 79 aa6.14□□□□□ -1.43
NR1I3-209ENST00000428574 ENHOQ6UWT2 76 aa6.14□□□□□ -1.43
NR1I3-209ENST00000428574 Q6ZVH6 145 aa6.14□□□□□ -1.43
NR1I3-209ENST00000428574 Q8IZM0 81 aa6.14□□□□□ -1.43
NR1I3-209ENST00000428574 RMI2Q96E14 147 aa6.14□□□□□ -1.43
NR1I3-209ENST00000428574 PPDPFQ9H3Y8 114 aa6.14□□□□□ -1.43
NR1I3-209ENST00000428574 SPANXB1Q9NS25 103 aaPredicted RBP6.14□□□□□ -1.43
NR1I3-209ENST00000428574 IBA57-AS1B1ANH7 110 aa6.13□□□□□ -1.43
NR1I3-209ENST00000428574 F8WDY8 70 aa6.13□□□□□ -1.43
NR1I3-209ENST00000428574 APOMO95445 188 aa6.13□□□□□ -1.43
NR1I3-209ENST00000428574 SPINK8P0C7L1 97 aa6.13□□□□□ -1.43
NR1I3-209ENST00000428574 TSPEAR-AS2P59090 65 aa6.13□□□□□ -1.43
NR1I3-209ENST00000428574 FOXI1Q12951 378 aa6.13□□□□□ -1.43
NR1I3-209ENST00000428574 NDUFA12Q9UI09 145 aa6.13□□□□□ -1.43
NR1I3-209ENST00000428574 COX11Q9Y6N1 276 aa6.13□□□□□ -1.43
NR1I3-209ENST00000428574 PRKDCP78527 4128 aaKnown RBP6.13□□□□□ -1.43
NR1I3-209ENST00000428574 A0A0J9YXY3 114 aa6.12□□□□□ -1.43
NR1I3-209ENST00000428574 TMEM238C9JI98 176 aa6.12□□□□□ -1.43
NR1I3-209ENST00000428574 IGHV3-30P01768 117 aa6.12□□□□□ -1.43
NR1I3-209ENST00000428574 IGHV3-33P01772 117 aa6.12□□□□□ -1.43
NR1I3-209ENST00000428574 IGHV3-30-5P0DP03 117 aa6.12□□□□□ -1.43
NR1I3-209ENST00000428574 XCL1P47992 114 aa6.12□□□□□ -1.43
NR1I3-209ENST00000428574 TTC32Q5I0X7 151 aa6.12□□□□□ -1.43
NR1I3-209ENST00000428574 SCGB1D4Q6XE38 83 aa6.12□□□□□ -1.43
NR1I3-209ENST00000428574 COX7B2Q8TF08 81 aa6.12□□□□□ -1.43
NR1I3-209ENST00000428574 UBE2WQ96B02 151 aa6.12□□□□□ -1.43
NR1I3-209ENST00000428574 ZNF625Q96I27 306 aaPredicted RBP6.12□□□□□ -1.43
NR1I3-209ENST00000428574 TP73-AS1Q9UF72 201 aa6.12□□□□□ -1.43
NR1I3-209ENST00000428574 COL7A1Q02388 2944 aa6.12□□□□□ -1.43
NR1I3-209ENST00000428574 IGHV3-64A0A075B6Q5 118 aa6.11□□□□□ -1.43
NR1I3-209ENST00000428574 IGKV3OR2-268A0A0C4DH90 116 aa6.11□□□□□ -1.43
NR1I3-209ENST00000428574 MALP21145 153 aa6.11□□□□□ -1.43
NR1I3-209ENST00000428574 Q8N3U1 123 aa6.11□□□□□ -1.43
NR1I3-209ENST00000428574 MAPKAPK5-AS1Q8N8E1 139 aa6.11□□□□□ -1.43
NR1I3-209ENST00000428574 MUC7Q8TAX7 377 aa6.11□□□□□ -1.43
NR1I3-209ENST00000428574 COPS9Q8WXC6 57 aa6.11□□□□□ -1.43
NR1I3-209ENST00000428574 WWC2-AS2Q96NR7 200 aa6.11□□□□□ -1.43
NR1I3-209ENST00000428574 C1orf43Q9BWL3 253 aa6.11□□□□□ -1.43
NR1I3-209ENST00000428574 Q9H8V8 135 aa6.11□□□□□ -1.43
NR1I3-209ENST00000428574 PRSS2P07478 247 aa6.1□□□□□ -1.43
NR1I3-209ENST00000428574 PTTG1IPP53801 180 aa6.1□□□□□ -1.43
NR1I3-209ENST00000428574 CIRBPQ14011 172 aaKnown RBP6.1□□□□□ -1.43
NR1I3-209ENST00000428574 KRTAP26-1Q6PEX3 210 aa6.1□□□□□ -1.43
NR1I3-209ENST00000428574 CLPSL2Q6UWE3 100 aa6.1□□□□□ -1.43
NR1I3-209ENST00000428574 UBE2DNLQ8IWF7 75 aa6.1□□□□□ -1.43
NR1I3-209ENST00000428574 TM2D2Q9BX73 214 aa6.1□□□□□ -1.43
NR1I3-209ENST00000428574 TTTY13Q9BZ97 58 aa6.1□□□□□ -1.43
NR1I3-209ENST00000428574 DYNC2H1Q8NCM8 4307 aaKnown RBP6.1□□□□□ -1.43
NR1I3-209ENST00000428574 FBN3Q75N90 2809 aa6.09□□□□□ -1.43
NR1I3-209ENST00000428574 GAGE12HA6NDE8 117 aa6.09□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 666.9 ms