RNA–Protein interactions for RNA: ENST00000425060.1

IGHV3-47-201, Transcript of immunoglobulin heavy variable 3-47 (pseudogene), humanhuman

BASIC

Gene IGHV3-47, Length 335 nt, Biotype IG V pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IGHV3-47-201ENST00000425060 NXT2Q9NPJ8 142 aaKnown RBP11.35□□□□□ -0.59
IGHV3-47-201ENST00000425060 IFITM10A6NMD0 228 aa11.34□□□□□ -0.59
IGHV3-47-201ENST00000425060 CARD19Q96LW7 228 aa11.34□□□□□ -0.59
IGHV3-47-201ENST00000425060 RPS10P5Q9NQ39 176 aa11.34□□□□□ -0.59
IGHV3-47-201ENST00000425060 PLAC8Q9NZF1 115 aa11.34□□□□□ -0.59
IGHV3-47-201ENST00000425060 CYSLTR1Q9Y271 337 aa11.34□□□□□ -0.59
IGHV3-47-201ENST00000425060 TMEM141Q96I45 108 aa11.33□□□□□ -0.6
IGHV3-47-201ENST00000425060 C2orf48Q96LS8 159 aa11.33□□□□□ -0.6
IGHV3-47-201ENST00000425060 A0A096LNI7 61 aa11.32□□□□□ -0.6
IGHV3-47-201ENST00000425060 IGIPA6NJ69 53 aa11.32□□□□□ -0.6
IGHV3-47-201ENST00000425060 APOMO95445 188 aa11.32□□□□□ -0.6
IGHV3-47-201ENST00000425060 COX19Q49B96 90 aa11.32□□□□□ -0.6
IGHV3-47-201ENST00000425060 LINC00242Q5T6M2 205 aa11.32□□□□□ -0.6
IGHV3-47-201ENST00000425060 Q6ZRU5 148 aa11.32□□□□□ -0.6
IGHV3-47-201ENST00000425060 DPH3Q96FX2 82 aa11.32□□□□□ -0.6
IGHV3-47-201ENST00000425060 HERC1Q15751 4861 aa11.32□□□□□ -0.6
IGHV3-47-201ENST00000425060 PKHD1L1Q86WI1 4243 aa11.31□□□□□ -0.6
IGHV3-47-201ENST00000425060 IGKV2-24A0A0C4DH68 120 aa11.31□□□□□ -0.6
IGHV3-47-201ENST00000425060 NPSP0C0P6 89 aa11.31□□□□□ -0.6
IGHV3-47-201ENST00000425060 RPL37AP61513 92 aaKnown RBP11.31□□□□□ -0.6
IGHV3-47-201ENST00000425060 LINC00173Q6ZV60 143 aa11.31□□□□□ -0.6
IGHV3-47-201ENST00000425060 AMELXQ99217 191 aa11.31□□□□□ -0.6
IGHV3-47-201ENST00000425060 ALKBH7Q9BT30 221 aaPredicted RBP11.31□□□□□ -0.6
IGHV3-47-201ENST00000425060 UBE2D1P51668 147 aa11.3□□□□□ -0.6
IGHV3-47-201ENST00000425060 MAJINQ3KP22 176 aa11.3□□□□□ -0.6
IGHV3-47-201ENST00000425060 ZC2HC1BQ5TFG8 222 aa11.3□□□□□ -0.6
IGHV3-47-201ENST00000425060 TEX43Q6ZNM6 134 aa11.3□□□□□ -0.6
IGHV3-47-201ENST00000425060 OR10D4PQ8NGN7 298 aa11.3□□□□□ -0.6
IGHV3-47-201ENST00000425060 LINC01546A6NGU7 62 aa11.29□□□□□ -0.6
IGHV3-47-201ENST00000425060 SPAG11BQ08648 103 aa11.29□□□□□ -0.6
IGHV3-47-201ENST00000425060 CAMK2N2Q96S95 79 aa11.29□□□□□ -0.6
IGHV3-47-201ENST00000425060 A0A087WZ39 114 aa11.28□□□□□ -0.6
IGHV3-47-201ENST00000425060 MT-ND6P03923 174 aa11.28□□□□□ -0.6
IGHV3-47-201ENST00000425060 TOMM6Q96B49 74 aa11.28□□□□□ -0.6
IGHV3-47-201ENST00000425060 PKIGQ9Y2B9 76 aa11.28□□□□□ -0.6
IGHV3-47-201ENST00000425060 LRP1Q07954 4544 aaKnown RBP11.27□□□□□ -0.6
IGHV3-47-201ENST00000425060 DMBT1Q9UGM3 2413 aaPredicted RBP11.27□□□□□ -0.6
IGHV3-47-201ENST00000425060 TGIF2-C20orf24A0A0A6YYL0 155 aa11.27□□□□□ -0.61
IGHV3-47-201ENST00000425060 APOC3P02656 99 aa11.27□□□□□ -0.61
IGHV3-47-201ENST00000425060 HNRNPA3P51991 378 aaKnown RBP11.27□□□□□ -0.61
IGHV3-47-201ENST00000425060 FAM19A3Q7Z5A8 133 aa11.27□□□□□ -0.61
IGHV3-47-201ENST00000425060 STPG4Q8N801 248 aa11.27□□□□□ -0.61
IGHV3-47-201ENST00000425060 ORAOV1Q8WV07 137 aa11.27□□□□□ -0.61
IGHV3-47-201ENST00000425060 MRPL18Q9H0U6 180 aaKnown RBP11.27□□□□□ -0.61
IGHV3-47-201ENST00000425060 VCX2Q9H322 139 aa11.27□□□□□ -0.61
IGHV3-47-201ENST00000425060 LINC00474Q9P2X8 69 aa11.27□□□□□ -0.61
IGHV3-47-201ENST00000425060 FAT3Q8TDW7 4589 aa11.27□□□□□ -0.61
IGHV3-47-201ENST00000425060 F8WDY8 70 aa11.26□□□□□ -0.61
IGHV3-47-201ENST00000425060 G0S2P27469 103 aa11.26□□□□□ -0.61
IGHV3-47-201ENST00000425060 FABP9Q0Z7S8 132 aa11.26□□□□□ -0.61
IGHV3-47-201ENST00000425060 KIAA0087Q14695 138 aa11.26□□□□□ -0.61
IGHV3-47-201ENST00000425060 RNF151Q2KHN1 245 aa11.26□□□□□ -0.61
IGHV3-47-201ENST00000425060 TIMM17AQ99595 171 aa11.26□□□□□ -0.61
IGHV3-47-201ENST00000425060 LOC107984640A0A0U1RRK4 108 aa11.25□□□□□ -0.61
IGHV3-47-201ENST00000425060 KRTAP29-1A8MX34 341 aaPredicted RBP11.25□□□□□ -0.61
IGHV3-47-201ENST00000425060 PTTG1IPP53801 180 aa11.25□□□□□ -0.61
IGHV3-47-201ENST00000425060 Q6ZN92 141 aa11.25□□□□□ -0.61
IGHV3-47-201ENST00000425060 C2orf88Q9BSF0 95 aa11.25□□□□□ -0.61
IGHV3-47-201ENST00000425060 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP11.24□□□□□ -0.61
IGHV3-47-201ENST00000425060 SNAPINO95295 136 aa11.24□□□□□ -0.61
IGHV3-47-201ENST00000425060 LINC01561Q8N1V8 128 aa11.24□□□□□ -0.61
IGHV3-47-201ENST00000425060 SVBPQ8N300 66 aa11.24□□□□□ -0.61
IGHV3-47-201ENST00000425060 MRPL35Q9NZE8 188 aaKnown RBP11.24□□□□□ -0.61
IGHV3-47-201ENST00000425060 C10orf25Q5T742 122 aa11.23□□□□□ -0.61
IGHV3-47-201ENST00000425060 ERASQ7Z444 233 aa11.23□□□□□ -0.61
IGHV3-47-201ENST00000425060 A0A0J9YXV3 536 aa11.22□□□□□ -0.61
IGHV3-47-201ENST00000425060 NDUFA5Q16718 116 aa11.22□□□□□ -0.61
IGHV3-47-201ENST00000425060 PAPPA-AS1Q5QFB9 102 aa11.22□□□□□ -0.61
IGHV3-47-201ENST00000425060 NDUFA1O15239 70 aa11.21□□□□□ -0.61
IGHV3-47-201ENST00000425060 GAGE2BQ13066 116 aa11.21□□□□□ -0.61
IGHV3-47-201ENST00000425060 UNQ6190/PRO20217Q6UXQ8 127 aa11.21□□□□□ -0.61
IGHV3-47-201ENST00000425060 C7orf33Q8WU49 177 aa11.2□□□□□ -0.62
IGHV3-47-201ENST00000425060 YPEL4Q96NS1 127 aa11.2□□□□□ -0.62
IGHV3-47-201ENST00000425060 SCGB3A1Q96QR1 104 aa11.2□□□□□ -0.62
IGHV3-47-201ENST00000425060 C6orf48Q9UBA6 75 aa11.2□□□□□ -0.62
IGHV3-47-201ENST00000425060 TRAPPC1Q9Y5R8 145 aa11.2□□□□□ -0.62
IGHV3-47-201ENST00000425060 A0A1W2PNN7 141 aa11.19□□□□□ -0.62
IGHV3-47-201ENST00000425060 LINC01549A6NIU2 74 aa11.19□□□□□ -0.62
IGHV3-47-201ENST00000425060 URB1-AS1Q96HZ7 61 aa11.19□□□□□ -0.62
IGHV3-47-201ENST00000425060 TLX1NBP0CAT3 122 aa11.18□□□□□ -0.62
IGHV3-47-201ENST00000425060 SEC11AP67812 179 aa11.18□□□□□ -0.62
IGHV3-47-201ENST00000425060 FA2HQ7L5A8 372 aa11.18□□□□□ -0.62
IGHV3-47-201ENST00000425060 C18orf32Q8TCD1 76 aa11.18□□□□□ -0.62
IGHV3-47-201ENST00000425060 J3QL48 77 aa11.17□□□□□ -0.62
IGHV3-47-201ENST00000425060 OXTP01178 125 aa11.17□□□□□ -0.62
IGHV3-47-201ENST00000425060 HERVK_113P63121 156 aa11.17□□□□□ -0.62
IGHV3-47-201ENST00000425060 RPL18AQ02543 176 aaKnown RBP11.17□□□□□ -0.62
IGHV3-47-201ENST00000425060 CDKN2A-AS1Q9UH64 79 aa11.17□□□□□ -0.62
IGHV3-47-201ENST00000425060 A0A096LNJ9 63 aa11.16□□□□□ -0.62
IGHV3-47-201ENST00000425060 C2orf82Q6UX34 121 aa11.16□□□□□ -0.62
IGHV3-47-201ENST00000425060 SMCO4Q9NRQ5 59 aa11.16□□□□□ -0.62
IGHV3-47-201ENST00000425060 C9orf116Q5BN46 136 aaPredicted RBP11.15□□□□□ -0.62
IGHV3-47-201ENST00000425060 Q6ZRP5 223 aa11.15□□□□□ -0.62
IGHV3-47-201ENST00000425060 CST9LQ9H4G1 147 aa11.15□□□□□ -0.62
IGHV3-47-201ENST00000425060 TRBV30A0A0K0K1B3 111 aa11.14□□□□□ -0.63
IGHV3-47-201ENST00000425060 LINC00614P0C842 121 aa11.14□□□□□ -0.63
IGHV3-47-201ENST00000425060 PRR3P79522 188 aaKnown RBP11.14□□□□□ -0.63
IGHV3-47-201ENST00000425060 GEMIN7Q9H840 131 aaKnown RBP11.14□□□□□ -0.63
IGHV3-47-201ENST00000425060 IGLV5-45A0A087WSX0 123 aa11.13□□□□□ -0.63
IGHV3-47-201ENST00000425060 TINCRA0A1B0GVN0 87 aa11.13□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 93 ms