RNA–Protein interactions for RNA: ENST00000424932.2

CKS1BP6-201, Transcript of CDC28 protein kinase regulatory subunit 1B pseudogene 6, humanhuman

BASIC

Gene CKS1BP6, Length 240 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1BP6-201ENST00000424932 NSD1Q96L73 2696 aaPredicted RBP3.41□□□□□ -1.86
CKS1BP6-201ENST00000424932 HIVEP2P31629 2446 aa3.4□□□□□ -1.86
CKS1BP6-201ENST00000424932 IGHV3OR16-9A0A0B4J2B5 98 aa3.4□□□□□ -1.87
CKS1BP6-201ENST00000424932 A0A1B0GUV1 79 aa3.4□□□□□ -1.87
CKS1BP6-201ENST00000424932 LYRM9A8MSI8 78 aa3.4□□□□□ -1.87
CKS1BP6-201ENST00000424932 A8MZ25 164 aa3.4□□□□□ -1.87
CKS1BP6-201ENST00000424932 C9JAW5 83 aa3.4□□□□□ -1.87
CKS1BP6-201ENST00000424932 H3BT86 120 aa3.4□□□□□ -1.87
CKS1BP6-201ENST00000424932 WIPF1O43516 503 aa3.4□□□□□ -1.87
CKS1BP6-201ENST00000424932 LY6G6DO95868 133 aa3.4□□□□□ -1.87
CKS1BP6-201ENST00000424932 PRSS2P07478 247 aa3.4□□□□□ -1.87
CKS1BP6-201ENST00000424932 COX6CP09669 75 aa3.4□□□□□ -1.87
CKS1BP6-201ENST00000424932 SCGB1C2P0DMR2 95 aa3.4□□□□□ -1.87
CKS1BP6-201ENST00000424932 RPL13AP40429 203 aaKnown RBP3.4□□□□□ -1.87
CKS1BP6-201ENST00000424932 Q1RN00 199 aa3.4□□□□□ -1.87
CKS1BP6-201ENST00000424932 LINC01620Q4KN68 170 aa3.4□□□□□ -1.87
CKS1BP6-201ENST00000424932 FAM222AQ5U5X8 452 aa3.4□□□□□ -1.87
CKS1BP6-201ENST00000424932 PRIMA1Q86XR5 153 aa3.4□□□□□ -1.87
CKS1BP6-201ENST00000424932 LINC01561Q8N1V8 128 aa3.4□□□□□ -1.87
CKS1BP6-201ENST00000424932 MTURNQ8N3F0 131 aa3.4□□□□□ -1.87
CKS1BP6-201ENST00000424932 LINC00308Q8TCZ7 52 aa3.4□□□□□ -1.87
CKS1BP6-201ENST00000424932 X6R8D5 127 aa3.4□□□□□ -1.87
CKS1BP6-201ENST00000424932 ZNF469Q96JG9 3925 aaPredicted RBP3.4□□□□□ -1.87
CKS1BP6-201ENST00000424932 SETD2Q9BYW2 2564 aaPredicted RBP3.4□□□□□ -1.87
CKS1BP6-201ENST00000424932 GCN1Q92616 2671 aaKnown RBP3.39□□□□□ -1.87
CKS1BP6-201ENST00000424932 FASNP49327 2511 aaKnown RBP3.39□□□□□ -1.87
CKS1BP6-201ENST00000424932 TRAV26-1A0A087WT03 109 aa3.39□□□□□ -1.87
CKS1BP6-201ENST00000424932 A0A087WZ39 114 aa3.39□□□□□ -1.87
CKS1BP6-201ENST00000424932 TRAV13-1A0A0B4J241 112 aa3.39□□□□□ -1.87
CKS1BP6-201ENST00000424932 TRBV10-2A0A0K0K1G8 114 aa3.39□□□□□ -1.87
CKS1BP6-201ENST00000424932 LOC100131303A0A0U1RQF7 123 aa3.39□□□□□ -1.87
CKS1BP6-201ENST00000424932 LST1O00453 97 aa3.39□□□□□ -1.87
CKS1BP6-201ENST00000424932 CRLF1O75462 422 aa3.39□□□□□ -1.87
CKS1BP6-201ENST00000424932 C21orf62-AS1Q17RA5 79 aa3.39□□□□□ -1.87
CKS1BP6-201ENST00000424932 SOSTDC1Q6X4U4 206 aa3.39□□□□□ -1.87
CKS1BP6-201ENST00000424932 ANKRD29Q8N6D5 301 aa3.39□□□□□ -1.87
CKS1BP6-201ENST00000424932 CARD19Q96LW7 228 aa3.39□□□□□ -1.87
CKS1BP6-201ENST00000424932 SIGMAR1Q99720 223 aa3.39□□□□□ -1.87
CKS1BP6-201ENST00000424932 NIPBLQ6KC79 2804 aaeCLIP3.38□□□□□ -1.87
CKS1BP6-201ENST00000424932 TMEM262E9PQX1 116 aa3.38□□□□□ -1.87
CKS1BP6-201ENST00000424932 H7C2G1 150 aa3.38□□□□□ -1.87
CKS1BP6-201ENST00000424932 COX7A2LO14548 114 aa3.38□□□□□ -1.87
CKS1BP6-201ENST00000424932 APOC4P55056 127 aa3.38□□□□□ -1.87
CKS1BP6-201ENST00000424932 SHISA2Q6UWI4 295 aa3.38□□□□□ -1.87
CKS1BP6-201ENST00000424932 COX7B2Q8TF08 81 aa3.38□□□□□ -1.87
CKS1BP6-201ENST00000424932 SMR3AQ99954 134 aa3.38□□□□□ -1.87
CKS1BP6-201ENST00000424932 CHCHD5Q9BSY4 110 aa3.38□□□□□ -1.87
CKS1BP6-201ENST00000424932 CDIP1Q9H305 208 aa3.38□□□□□ -1.87
CKS1BP6-201ENST00000424932 PRO0255Q9UI72 69 aa3.38□□□□□ -1.87
CKS1BP6-201ENST00000424932 C2CD3Q4AC94 2353 aa3.37□□□□□ -1.87
CKS1BP6-201ENST00000424932 IGLV4-60A0A075B6I1 120 aa3.37□□□□□ -1.87
CKS1BP6-201ENST00000424932 FAM240AA0A1B0GVK7 77 aa3.37□□□□□ -1.87
CKS1BP6-201ENST00000424932 IBA57-AS1B1ANH7 110 aa3.37□□□□□ -1.87
CKS1BP6-201ENST00000424932 TRACP01848 142 aa3.37□□□□□ -1.87
CKS1BP6-201ENST00000424932 GAGE6Q13070 117 aa3.37□□□□□ -1.87
CKS1BP6-201ENST00000424932 DEFB121Q5J5C9 76 aa3.37□□□□□ -1.87
CKS1BP6-201ENST00000424932 MEIG1Q5JSS6 88 aa3.37□□□□□ -1.87
CKS1BP6-201ENST00000424932 DAND5Q8N907 189 aa3.37□□□□□ -1.87
CKS1BP6-201ENST00000424932 CITED1Q99966 193 aa3.37□□□□□ -1.87
CKS1BP6-201ENST00000424932 OTOGQ6ZRI0 2925 aa3.36□□□□□ -1.87
CKS1BP6-201ENST00000424932 TRAV13-2A0A0B4J235 113 aa3.36□□□□□ -1.87
CKS1BP6-201ENST00000424932 LINC00959A0A1B0GUT2 108 aa3.36□□□□□ -1.87
CKS1BP6-201ENST00000424932 DEFB130BP0DP73 79 aa3.36□□□□□ -1.87
CKS1BP6-201ENST00000424932 DEFB130AP0DP74 79 aa3.36□□□□□ -1.87
CKS1BP6-201ENST00000424932 MIFP14174 115 aa3.36□□□□□ -1.87
CKS1BP6-201ENST00000424932 GYPEP15421 78 aa3.36□□□□□ -1.87
CKS1BP6-201ENST00000424932 RPL28P46779 137 aaKnown RBP3.36□□□□□ -1.87
CKS1BP6-201ENST00000424932 NPC2P61916 151 aa3.36□□□□□ -1.87
CKS1BP6-201ENST00000424932 C2orf82Q6UX34 121 aa3.36□□□□□ -1.87
CKS1BP6-201ENST00000424932 Q8IZM0 81 aa3.36□□□□□ -1.87
CKS1BP6-201ENST00000424932 WFDC9Q8NEX5 89 aa3.36□□□□□ -1.87
CKS1BP6-201ENST00000424932 NTN5Q8WTR8 489 aaPredicted RBP3.36□□□□□ -1.87
CKS1BP6-201ENST00000424932 UBE2WQ96B02 151 aa3.36□□□□□ -1.87
CKS1BP6-201ENST00000424932 NOTCH2Q04721 2471 aa3.35□□□□□ -1.87
CKS1BP6-201ENST00000424932 IGHV4-28A0A0C4DH34 117 aa3.35□□□□□ -1.87
CKS1BP6-201ENST00000424932 INAFM1C9JVW0 142 aa3.35□□□□□ -1.87
CKS1BP6-201ENST00000424932 PAX4O43316 350 aa3.35□□□□□ -1.87
CKS1BP6-201ENST00000424932 CRPP02741 224 aa3.35□□□□□ -1.87
CKS1BP6-201ENST00000424932 CXCL5P42830 114 aa3.35□□□□□ -1.87
CKS1BP6-201ENST00000424932 SS18Q15532 418 aa3.35□□□□□ -1.87
CKS1BP6-201ENST00000424932 MIR7-3HGQ8N6C7 128 aa3.35□□□□□ -1.87
CKS1BP6-201ENST00000424932 Q8NAQ8 132 aa3.35□□□□□ -1.87
CKS1BP6-201ENST00000424932 MUC7Q8TAX7 377 aa3.35□□□□□ -1.87
CKS1BP6-201ENST00000424932 CLEC2BQ92478 149 aa3.35□□□□□ -1.87
CKS1BP6-201ENST00000424932 NBPF19A0A087WUL8 3843 aa3.35□□□□□ -1.87
CKS1BP6-201ENST00000424932 FN1P02751 2386 aaKnown RBP3.34□□□□□ -1.87
CKS1BP6-201ENST00000424932 IGKV2-28A0A075B6P5 120 aa3.34□□□□□ -1.87
CKS1BP6-201ENST00000424932 TEX49A0A1B0GTD5 131 aa3.34□□□□□ -1.87
CKS1BP6-201ENST00000424932 IGKV2D-28P01615 120 aa3.34□□□□□ -1.87
CKS1BP6-201ENST00000424932 ATP5G1P05496 136 aa3.34□□□□□ -1.87
CKS1BP6-201ENST00000424932 XGP55808 180 aa3.34□□□□□ -1.87
CKS1BP6-201ENST00000424932 COX17Q14061 63 aa3.34□□□□□ -1.87
CKS1BP6-201ENST00000424932 MRPL23Q16540 153 aaKnown RBP3.34□□□□□ -1.87
CKS1BP6-201ENST00000424932 DEFB135Q30KP9 77 aa3.34□□□□□ -1.87
CKS1BP6-201ENST00000424932 CD164L2Q6UWJ8 174 aa3.34□□□□□ -1.87
CKS1BP6-201ENST00000424932 LINC00337Q8N6G1 96 aa3.34□□□□□ -1.87
CKS1BP6-201ENST00000424932 SPATA3Q8NHX4 192 aa3.34□□□□□ -1.87
CKS1BP6-201ENST00000424932 SND1-IT1Q9HBX3 110 aa3.34□□□□□ -1.87
CKS1BP6-201ENST00000424932 TEP1Q99973 2627 aaKnown RBP3.34□□□□□ -1.88
CKS1BP6-201ENST00000424932 HECTD1Q9ULT8 2610 aa3.34□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms