RNA–Protein interactions for RNA: ENST00000424143.5

C9orf3-204, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 2

Gene C9orf3, Length 1,605 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-204ENST00000424143 GIG44P09565 113 aaPredicted RBP10.71□□□□□ -0.69
C9orf3-204ENST00000424143 SMIM11BQ8TCY0 68 aa10.71□□□□□ -0.69
C9orf3-204ENST00000424143 NOP10Q9NPE3 64 aaKnown RBP10.71□□□□□ -0.69
C9orf3-204ENST00000424143 TRBV6-8A0A0A6YYG3 113 aa10.7□□□□□ -0.7
C9orf3-204ENST00000424143 CCL24O00175 119 aa10.7□□□□□ -0.7
C9orf3-204ENST00000424143 DNAL4O96015 105 aa10.7□□□□□ -0.7
C9orf3-204ENST00000424143 CCL18P55774 89 aa10.7□□□□□ -0.7
C9orf3-204ENST00000424143 KHDC1LQ5JSQ8 128 aa10.7□□□□□ -0.7
C9orf3-204ENST00000424143 C11orf44Q8N8P7 122 aa10.7□□□□□ -0.7
C9orf3-204ENST00000424143 SPTBN4Q9H254 2564 aa10.7□□□□□ -0.7
C9orf3-204ENST00000424143 Q6JHZ5 121 aa10.69□□□□□ -0.7
C9orf3-204ENST00000424143 ZFHX3Q15911 3703 aa10.69□□□□□ -0.7
C9orf3-204ENST00000424143 ATOX1O00244 68 aa10.69□□□□□ -0.7
C9orf3-204ENST00000424143 DEFB113Q30KQ7 82 aa10.69□□□□□ -0.7
C9orf3-204ENST00000424143 MAPK1IP1LQ8NDC0 245 aa10.69□□□□□ -0.7
C9orf3-204ENST00000424143 LINC00167Q96N53 147 aa10.69□□□□□ -0.7
C9orf3-204ENST00000424143 KLK5Q9Y337 293 aaPredicted RBP10.69□□□□□ -0.7
C9orf3-204ENST00000424143 A0A1W2PRX2 142 aa10.68□□□□□ -0.7
C9orf3-204ENST00000424143 LINC00158P58513 81 aa10.68□□□□□ -0.7
C9orf3-204ENST00000424143 CSNK1G2-AS1Q8NCQ2 148 aa10.68□□□□□ -0.7
C9orf3-204ENST00000424143 COX7CP15954 63 aa10.67□□□□□ -0.7
C9orf3-204ENST00000424143 FHL2Q14192 279 aa10.67□□□□□ -0.7
C9orf3-204ENST00000424143 TRGV2A0A075B6R0 118 aa10.66□□□□□ -0.7
C9orf3-204ENST00000424143 GAGE2AQ6NT46 116 aa10.66□□□□□ -0.7
C9orf3-204ENST00000424143 CELSR1Q9NYQ6 3014 aa10.66□□□□□ -0.7
C9orf3-204ENST00000424143 NCOR2Q9Y618 2525 aa10.66□□□□□ -0.7
C9orf3-204ENST00000424143 A0A1B0GUV1 79 aa10.66□□□□□ -0.7
C9orf3-204ENST00000424143 CRYGAP11844 174 aa10.66□□□□□ -0.7
C9orf3-204ENST00000424143 C19orf73Q9NVV2 129 aa10.66□□□□□ -0.7
C9orf3-204ENST00000424143 TRGV4A0A0C4DH28 118 aa10.65□□□□□ -0.7
C9orf3-204ENST00000424143 C9orf153Q5TBE3 101 aa10.65□□□□□ -0.7
C9orf3-204ENST00000424143 SMIM20Q8N5G0 67 aa10.65□□□□□ -0.7
C9orf3-204ENST00000424143 LINC00612Q8N6U2 182 aa10.65□□□□□ -0.7
C9orf3-204ENST00000424143 Q9HAA7 133 aa10.65□□□□□ -0.7
C9orf3-204ENST00000424143 ITPR1Q14643 2758 aa10.65□□□□□ -0.71
C9orf3-204ENST00000424143 A0A087WYN8 130 aa10.64□□□□□ -0.71
C9orf3-204ENST00000424143 KIR2DL5BQ8NHK3 375 aa10.64□□□□□ -0.71
C9orf3-204ENST00000424143 C2orf48Q96LS8 159 aa10.64□□□□□ -0.71
C9orf3-204ENST00000424143 C16orf95Q9H693 158 aa10.64□□□□□ -0.71
C9orf3-204ENST00000424143 IGLV4-60A0A075B6I1 120 aa10.63□□□□□ -0.71
C9orf3-204ENST00000424143 LINC00959A0A1B0GUT2 108 aa10.63□□□□□ -0.71
C9orf3-204ENST00000424143 IGLV1-51P01701 117 aa10.63□□□□□ -0.71
C9orf3-204ENST00000424143 Q8IZM0 81 aa10.63□□□□□ -0.71
C9orf3-204ENST00000424143 NDUFC2O95298 119 aa10.62□□□□□ -0.71
C9orf3-204ENST00000424143 TOMM7Q9P0U1 55 aa10.62□□□□□ -0.71
C9orf3-204ENST00000424143 S100A7L2Q5SY68 101 aa10.62□□□□□ -0.71
C9orf3-204ENST00000424143 LOC100131303A0A0U1RQF7 123 aa10.61□□□□□ -0.71
C9orf3-204ENST00000424143 DNAJC9-AS1A6NH13 148 aa10.61□□□□□ -0.71
C9orf3-204ENST00000424143 JMJD7-PLA2G4BH0Y9G9 81 aa10.61□□□□□ -0.71
C9orf3-204ENST00000424143 RPL18AQ02543 176 aaKnown RBP10.61□□□□□ -0.71
C9orf3-204ENST00000424143 COX17Q14061 63 aa10.61□□□□□ -0.71
C9orf3-204ENST00000424143 ORMDL1Q9P0S3 153 aa10.61□□□□□ -0.71
C9orf3-204ENST00000424143 CHD8Q9HCK8 2581 aa10.6□□□□□ -0.71
C9orf3-204ENST00000424143 RPS28P62857 69 aaKnown RBP10.6□□□□□ -0.71
C9orf3-204ENST00000424143 SS18Q15532 418 aa10.6□□□□□ -0.71
C9orf3-204ENST00000424143 MUC7Q8TAX7 377 aa10.6□□□□□ -0.71
C9orf3-204ENST00000424143 ANKRD17O75179 2603 aaKnown RBP10.6□□□□□ -0.71
C9orf3-204ENST00000424143 PAX4O43316 350 aa10.59□□□□□ -0.71
C9orf3-204ENST00000424143 CCKP06307 115 aa10.59□□□□□ -0.71
C9orf3-204ENST00000424143 ATP5EP2Q5VTU8 51 aa10.59□□□□□ -0.71
C9orf3-204ENST00000424143 KRTAP1-3Q8IUG1 177 aa10.59□□□□□ -0.71
C9orf3-204ENST00000424143 USP9YO00507 2555 aaPredicted RBP10.59□□□□□ -0.71
C9orf3-204ENST00000424143 PKD1L2Q7Z442 2459 aa10.59□□□□□ -0.71
C9orf3-204ENST00000424143 USP9XQ93008 2570 aaPredicted RBP10.59□□□□□ -0.71
C9orf3-204ENST00000424143 LECT2O14960 151 aa10.58□□□□□ -0.72
C9orf3-204ENST00000424143 C6orf226Q5I0X4 101 aa10.58□□□□□ -0.72
C9orf3-204ENST00000424143 CACNA1AO00555 2505 aa10.58□□□□□ -0.72
C9orf3-204ENST00000424143 C14orf132Q9NPU4 83 aa10.58□□□□□ -0.72
C9orf3-204ENST00000424143 LINC00846Q9NV44 126 aa10.57□□□□□ -0.72
C9orf3-204ENST00000424143 IGHV4-28A0A0C4DH34 117 aa10.56□□□□□ -0.72
C9orf3-204ENST00000424143 LYPD5Q6UWN5 251 aa10.56□□□□□ -0.72
C9orf3-204ENST00000424143 TMEM256-PLSCR3K7ERE1 68 aa10.55□□□□□ -0.72
C9orf3-204ENST00000424143 SERP2Q8N6R1 65 aa10.55□□□□□ -0.72
C9orf3-204ENST00000424143 VPS13CQ709C8 3753 aa10.55□□□□□ -0.72
C9orf3-204ENST00000424143 TRBV10-3A0A0K0K1G6 114 aa10.55□□□□□ -0.72
C9orf3-204ENST00000424143 SMIM9A6NGZ8 99 aa10.55□□□□□ -0.72
C9orf3-204ENST00000424143 PFN2P35080 140 aa10.55□□□□□ -0.72
C9orf3-204ENST00000424143 C9orf129Q5T035 196 aaKnown RBP10.55□□□□□ -0.72
C9orf3-204ENST00000424143 RNASE1P07998 156 aaKnown RBP10.54□□□□□ -0.72
C9orf3-204ENST00000424143 RPL35AP18077 110 aaKnown RBP10.54□□□□□ -0.72
C9orf3-204ENST00000424143 KRTAP10-9P60411 292 aa10.54□□□□□ -0.72
C9orf3-204ENST00000424143 OR13C6PQ8NH95 151 aa10.54□□□□□ -0.72
C9orf3-204ENST00000424143 H3BQ85 93 aa10.53□□□□□ -0.72
C9orf3-204ENST00000424143 NANOS2P60321 138 aaKnown RBP10.53□□□□□ -0.72
C9orf3-204ENST00000424143 Q8N814 137 aa10.53□□□□□ -0.72
C9orf3-204ENST00000424143 CFAP46Q8IYW2 2715 aa10.53□□□□□ -0.72
C9orf3-204ENST00000424143 LINC01006Q8NI28 216 aa10.52□□□□□ -0.73
C9orf3-204ENST00000424143 ESM1Q9NQ30 184 aa10.52□□□□□ -0.73
C9orf3-204ENST00000424143 IGKV3OR2-268A0A0C4DH90 116 aa10.51□□□□□ -0.73
C9orf3-204ENST00000424143 BCE1O60756 84 aa10.51□□□□□ -0.73
C9orf3-204ENST00000424143 KIAA0087Q14695 138 aa10.51□□□□□ -0.73
C9orf3-204ENST00000424143 CD164L2Q6UWJ8 174 aa10.51□□□□□ -0.73
C9orf3-204ENST00000424143 MXRA5Q9NR99 2828 aa10.51□□□□□ -0.73
C9orf3-204ENST00000424143 J3KT08 172 aa10.51□□□□□ -0.73
C9orf3-204ENST00000424143 NCR3O14931 201 aa10.51□□□□□ -0.73
C9orf3-204ENST00000424143 PRO0255Q9UI72 69 aa10.51□□□□□ -0.73
C9orf3-204ENST00000424143 PIEZO1Q92508 2521 aa10.5□□□□□ -0.73
C9orf3-204ENST00000424143 TMEM258P61165 79 aa10.5□□□□□ -0.73
C9orf3-204ENST00000424143 UPK3BQ9BT76 320 aa10.5□□□□□ -0.73
C9orf3-204ENST00000424143 CELSR2Q9HCU4 2923 aa10.5□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 118.2 ms