RNA–Protein interactions for RNA: ENST00000421670.3

DDX55-203, Transcript of DEAD-box helicase 55, humanhuman

TSL 1 (best) BASIC

Gene DDX55, Length 1,574 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-203ENST00000421670 CD164L2Q6UWJ8 174 aa10.41□□□□□ -0.74
DDX55-203ENST00000421670 S100A2P29034 98 aa10.4□□□□□ -0.74
DDX55-203ENST00000421670 DNAH11Q96DT5 4516 aa10.4□□□□□ -0.74
DDX55-203ENST00000421670 TNP2Q05952 138 aa10.39□□□□□ -0.75
DDX55-203ENST00000421670 WFDC2Q14508 124 aa10.39□□□□□ -0.75
DDX55-203ENST00000421670 PACRGQ96M98 296 aaPredicted RBP10.39□□□□□ -0.75
DDX55-203ENST00000421670 HIST1H2BLQ99880 126 aa10.39□□□□□ -0.75
DDX55-203ENST00000421670 MAP1LC3CQ9BXW4 147 aa10.39□□□□□ -0.75
DDX55-203ENST00000421670 HECTD4Q9Y4D8 3996 aa10.39□□□□□ -0.75
DDX55-203ENST00000421670 IGLV4-69A0A075B6H9 119 aa10.39□□□□□ -0.75
DDX55-203ENST00000421670 TRAV12-1A0A0B4J245 112 aa10.39□□□□□ -0.75
DDX55-203ENST00000421670 IGHV3OR16-9A0A0B4J2B5 98 aa10.39□□□□□ -0.75
DDX55-203ENST00000421670 FAM19A3Q7Z5A8 133 aa10.39□□□□□ -0.75
DDX55-203ENST00000421670 C5orf38Q86SI9 138 aa10.39□□□□□ -0.75
DDX55-203ENST00000421670 KRTAP3-3Q9BYR6 98 aa10.39□□□□□ -0.75
DDX55-203ENST00000421670 KRTAP3-2Q9BYR7 98 aa10.39□□□□□ -0.75
DDX55-203ENST00000421670 CHTOPQ9Y3Y2 248 aaKnown RBP10.39□□□□□ -0.75
DDX55-203ENST00000421670 ODF1Q14990 250 aa10.38□□□□□ -0.75
DDX55-203ENST00000421670 CHAC1Q9BUX1 264 aa10.38□□□□□ -0.75
DDX55-203ENST00000421670 GEMIN7Q9H840 131 aaKnown RBP10.38□□□□□ -0.75
DDX55-203ENST00000421670 MRPL35Q9NZE8 188 aaKnown RBP10.38□□□□□ -0.75
DDX55-203ENST00000421670 TINCRA0A1B0GVN0 87 aa10.37□□□□□ -0.75
DDX55-203ENST00000421670 LRCOL1A6NCL2 159 aa10.37□□□□□ -0.75
DDX55-203ENST00000421670 COX7A2LO14548 114 aa10.37□□□□□ -0.75
DDX55-203ENST00000421670 HERVK_113P63121 156 aa10.37□□□□□ -0.75
DDX55-203ENST00000421670 SPATA12Q7Z6I5 190 aa10.37□□□□□ -0.75
DDX55-203ENST00000421670 USP17L23D6RBM5 183 aa10.36□□□□□ -0.75
DDX55-203ENST00000421670 SYS1-DBNDD2H3BUS1 97 aa10.36□□□□□ -0.75
DDX55-203ENST00000421670 C3orf79P0CE67 100 aa10.36□□□□□ -0.75
DDX55-203ENST00000421670 IGLC3P0DOY3 106 aa10.36□□□□□ -0.75
DDX55-203ENST00000421670 KRTDAPP60985 99 aa10.36□□□□□ -0.75
DDX55-203ENST00000421670 SEC11AP67812 179 aa10.36□□□□□ -0.75
DDX55-203ENST00000421670 PMCHL2Q9BQD1 86 aa10.36□□□□□ -0.75
DDX55-203ENST00000421670 CDKN2A-AS1Q9UH64 79 aa10.36□□□□□ -0.75
DDX55-203ENST00000421670 A0A087WTM6 91 aa10.35□□□□□ -0.75
DDX55-203ENST00000421670 F8VRH5 84 aa10.35□□□□□ -0.75
DDX55-203ENST00000421670 LINC00469Q8N7U9 141 aa10.35□□□□□ -0.75
DDX55-203ENST00000421670 C15orf56Q8N910 161 aa10.35□□□□□ -0.75
DDX55-203ENST00000421670 C11orf86A6NJI1 115 aa10.35□□□□□ -0.75
DDX55-203ENST00000421670 MALP21145 153 aa10.35□□□□□ -0.75
DDX55-203ENST00000421670 A0A087WZ39 114 aa10.34□□□□□ -0.75
DDX55-203ENST00000421670 LINC00336Q6ZUF6 198 aa10.34□□□□□ -0.75
DDX55-203ENST00000421670 PKHD1P08F94 4074 aa10.34□□□□□ -0.75
DDX55-203ENST00000421670 IGLV5-45A0A087WSX0 123 aa10.33□□□□□ -0.76
DDX55-203ENST00000421670 ZNF22P17026 224 aaPredicted RBP10.33□□□□□ -0.76
DDX55-203ENST00000421670 HIGD2BQ4VC39 106 aa10.32□□□□□ -0.76
DDX55-203ENST00000421670 PET117Q6UWS5 81 aa10.31□□□□□ -0.76
DDX55-203ENST00000421670 Q8N814 137 aa10.31□□□□□ -0.76
DDX55-203ENST00000421670 DNAH5Q8TE73 4624 aa10.31□□□□□ -0.76
DDX55-203ENST00000421670 IGHV1-58A0A0C4DH39 117 aa10.31□□□□□ -0.76
DDX55-203ENST00000421670 SPINK8P0C7L1 97 aa10.31□□□□□ -0.76
DDX55-203ENST00000421670 TMEM170BQ5T4T1 132 aa10.31□□□□□ -0.76
DDX55-203ENST00000421670 LINC01545Q5VT33 79 aa10.31□□□□□ -0.76
DDX55-203ENST00000421670 LINC00526Q96FQ7 95 aa10.31□□□□□ -0.76
DDX55-203ENST00000421670 IGLV2-33A0A075B6J2 118 aaPredicted RBP10.3□□□□□ -0.76
DDX55-203ENST00000421670 hDV102S1A0JD36 115 aa10.3□□□□□ -0.76
DDX55-203ENST00000421670 DPM2O94777 84 aa10.3□□□□□ -0.76
DDX55-203ENST00000421670 PLNP26678 52 aa10.3□□□□□ -0.76
DDX55-203ENST00000421670 CFAP161Q6P656 301 aa10.3□□□□□ -0.76
DDX55-203ENST00000421670 ORAOV1Q8WV07 137 aa10.3□□□□□ -0.76
DDX55-203ENST00000421670 IGHV3-64A0A075B6Q5 118 aa10.29□□□□□ -0.76
DDX55-203ENST00000421670 GVQW2A0A096LPI5 108 aaPredicted RBP10.29□□□□□ -0.76
DDX55-203ENST00000421670 SMIM1B2RUZ4 78 aa10.29□□□□□ -0.76
DDX55-203ENST00000421670 EREGO14944 169 aa10.29□□□□□ -0.76
DDX55-203ENST00000421670 APOMO95445 188 aa10.29□□□□□ -0.76
DDX55-203ENST00000421670 IGKCP01834 107 aa10.29□□□□□ -0.76
DDX55-203ENST00000421670 FUSP35637 526 aaKnown RBP eCLIP10.29□□□□□ -0.76
DDX55-203ENST00000421670 OR10D4PQ8NGN7 298 aa10.29□□□□□ -0.76
DDX55-203ENST00000421670 H3BRM9 83 aa10.28□□□□□ -0.76
DDX55-203ENST00000421670 C14orf177Q52M58 125 aa10.28□□□□□ -0.76
DDX55-203ENST00000421670 SPAG11BQ08648 103 aa10.27□□□□□ -0.76
DDX55-203ENST00000421670 LINC01561Q8N1V8 128 aa10.27□□□□□ -0.76
DDX55-203ENST00000421670 TOMM7Q9P0U1 55 aa10.26□□□□□ -0.77
DDX55-203ENST00000421670 A0A1B0GVY2 172 aa10.26□□□□□ -0.77
DDX55-203ENST00000421670 C20orf202A1L168 122 aa10.26□□□□□ -0.77
DDX55-203ENST00000421670 ZNF561-AS1K7EIQ3 104 aa10.26□□□□□ -0.77
DDX55-203ENST00000421670 KRTAP10-2P60368 255 aa10.26□□□□□ -0.77
DDX55-203ENST00000421670 TMEM223A0PJW6 202 aa10.25□□□□□ -0.77
DDX55-203ENST00000421670 ATOH7Q8N100 152 aa10.25□□□□□ -0.77
DDX55-203ENST00000421670 SLPIP03973 132 aa10.24□□□□□ -0.77
DDX55-203ENST00000421670 IGLV5-39A0A0G2JS06 123 aa10.23□□□□□ -0.77
DDX55-203ENST00000421670 KIAA0087Q14695 138 aa10.23□□□□□ -0.77
DDX55-203ENST00000421670 NTN5Q8WTR8 489 aaPredicted RBP10.23□□□□□ -0.77
DDX55-203ENST00000421670 PRSS2P07478 247 aa10.22□□□□□ -0.77
DDX55-203ENST00000421670 Q8IZM0 81 aa10.22□□□□□ -0.77
DDX55-203ENST00000421670 COX7B2Q8TF08 81 aa10.22□□□□□ -0.77
DDX55-203ENST00000421670 C2orf82Q6UX34 121 aa10.22□□□□□ -0.77
DDX55-203ENST00000421670 CAMK2N2Q96S95 79 aa10.22□□□□□ -0.77
DDX55-203ENST00000421670 EPPK1P58107 5090 aaKnown RBP10.22□□□□□ -0.77
DDX55-203ENST00000421670 IGLV5-52A0A0A0MRZ9 124 aa10.21□□□□□ -0.78
DDX55-203ENST00000421670 SCGB1D1O95968 90 aa10.21□□□□□ -0.78
DDX55-203ENST00000421670 CNBPP62633 177 aaKnown RBP10.2□□□□□ -0.78
DDX55-203ENST00000421670 LINC01620Q4KN68 170 aa10.2□□□□□ -0.78
DDX55-203ENST00000421670 C6orf226Q5I0X4 101 aa10.2□□□□□ -0.78
DDX55-203ENST00000421670 STPG4Q8N801 248 aa10.2□□□□□ -0.78
DDX55-203ENST00000421670 C2orf48Q96LS8 159 aa10.2□□□□□ -0.78
DDX55-203ENST00000421670 HERVK_113P61574 105 aa10.19□□□□□ -0.78
DDX55-203ENST00000421670 SYCNQ0VAF6 134 aa10.19□□□□□ -0.78
DDX55-203ENST00000421670 C10orf25Q5T742 122 aa10.19□□□□□ -0.78
DDX55-203ENST00000421670 Q6ZRU5 148 aa10.19□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 81.1 ms