RNA–Protein interactions for RNA: ENST00000420166.5

HMGXB4-203, Transcript of HMG-box containing 4, humanhuman

TSL 2

Gene HMGXB4, Length 1,257 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB4-203ENST00000420166 HBDP02042 147 aa13.4□□□□□ -0.26
HMGXB4-203ENST00000420166 MALP21145 153 aa13.4□□□□□ -0.26
HMGXB4-203ENST00000420166 CNBPP62633 177 aaKnown RBP13.4□□□□□ -0.26
HMGXB4-203ENST00000420166 LINC01620Q4KN68 170 aa13.4□□□□□ -0.26
HMGXB4-203ENST00000420166 PMCHL1Q16048 86 aa13.39□□□□□ -0.27
HMGXB4-203ENST00000420166 CHCHD1Q96BP2 118 aaKnown RBP13.39□□□□□ -0.27
HMGXB4-203ENST00000420166 ATP6V1G1O75348 118 aa13.38□□□□□ -0.27
HMGXB4-203ENST00000420166 SLPIP03973 132 aa13.38□□□□□ -0.27
HMGXB4-203ENST00000420166 S100A1P23297 94 aa13.38□□□□□ -0.27
HMGXB4-203ENST00000420166 BAGE3Q86Y29 109 aa13.37□□□□□ -0.27
HMGXB4-203ENST00000420166 C9orf163Q8N9P6 203 aa13.37□□□□□ -0.27
HMGXB4-203ENST00000420166 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP13.36□□□□□ -0.27
HMGXB4-203ENST00000420166 COX6A2Q02221 97 aa13.36□□□□□ -0.27
HMGXB4-203ENST00000420166 PDZD11Q5EBL8 140 aa13.36□□□□□ -0.27
HMGXB4-203ENST00000420166 FAM19A3Q7Z5A8 133 aa13.36□□□□□ -0.27
HMGXB4-203ENST00000420166 TRAV16A0A0A6YYK6 109 aaPredicted RBP13.35□□□□□ -0.27
HMGXB4-203ENST00000420166 APOMO95445 188 aa13.35□□□□□ -0.27
HMGXB4-203ENST00000420166 A0A087WZ39 114 aa13.34□□□□□ -0.27
HMGXB4-203ENST00000420166 SEC11AP67812 179 aa13.34□□□□□ -0.27
HMGXB4-203ENST00000420166 LINC00526Q96FQ7 95 aa13.34□□□□□ -0.27
HMGXB4-203ENST00000420166 ZNF561-AS1K7EIQ3 104 aa13.33□□□□□ -0.28
HMGXB4-203ENST00000420166 Q6ZSA8 131 aa13.33□□□□□ -0.28
HMGXB4-203ENST00000420166 CST9LQ9H4G1 147 aa13.33□□□□□ -0.28
HMGXB4-203ENST00000420166 FAM30AQ9NZY2 134 aa13.33□□□□□ -0.28
HMGXB4-203ENST00000420166 RYR1P21817 5038 aa13.33□□□□□ -0.28
HMGXB4-203ENST00000420166 IGHV3-64A0A075B6Q5 118 aa13.32□□□□□ -0.28
HMGXB4-203ENST00000420166 ATP5LO75964 103 aa13.32□□□□□ -0.28
HMGXB4-203ENST00000420166 PMVKQ15126 192 aa13.32□□□□□ -0.28
HMGXB4-203ENST00000420166 OR10D4PQ8NGN7 298 aa13.32□□□□□ -0.28
HMGXB4-203ENST00000420166 A0A0J9YXV3 536 aa13.31□□□□□ -0.28
HMGXB4-203ENST00000420166 HSBP1O75506 76 aa13.31□□□□□ -0.28
HMGXB4-203ENST00000420166 SERF1AO75920 110 aa13.31□□□□□ -0.28
HMGXB4-203ENST00000420166 XGP55808 180 aa13.31□□□□□ -0.28
HMGXB4-203ENST00000420166 LINC00310P59036 64 aa13.31□□□□□ -0.28
HMGXB4-203ENST00000420166 HERVK_113P63121 156 aa13.31□□□□□ -0.28
HMGXB4-203ENST00000420166 SPAG11BQ08648 103 aa13.31□□□□□ -0.28
HMGXB4-203ENST00000420166 ORAOV1Q8WV07 137 aa13.31□□□□□ -0.28
HMGXB4-203ENST00000420166 IGLV4-69A0A075B6H9 119 aa13.3□□□□□ -0.28
HMGXB4-203ENST00000420166 LINC01561Q8N1V8 128 aa13.3□□□□□ -0.28
HMGXB4-203ENST00000420166 GEMIN7Q9H840 131 aaKnown RBP13.3□□□□□ -0.28
HMGXB4-203ENST00000420166 APOBP04114 4563 aaKnown RBP13.3□□□□□ -0.28
HMGXB4-203ENST00000420166 SDIM1Q6ZPB5 146 aa13.29□□□□□ -0.28
HMGXB4-203ENST00000420166 TINCRA0A1B0GVN0 87 aa13.28□□□□□ -0.28
HMGXB4-203ENST00000420166 NDUFA6P56556 154 aa13.28□□□□□ -0.28
HMGXB4-203ENST00000420166 SYCNQ0VAF6 134 aa13.28□□□□□ -0.28
HMGXB4-203ENST00000420166 FAM19A2Q8N3H0 131 aa13.28□□□□□ -0.28
HMGXB4-203ENST00000420166 C2orf48Q96LS8 159 aa13.28□□□□□ -0.28
HMGXB4-203ENST00000420166 CARD19Q96LW7 228 aa13.28□□□□□ -0.28
HMGXB4-203ENST00000420166 HERC2O95714 4834 aa13.28□□□□□ -0.28
HMGXB4-203ENST00000420166 CDKN2A-AS1Q9UH64 79 aa13.27□□□□□ -0.29
HMGXB4-203ENST00000420166 HIST1H2BKO60814 126 aa13.26□□□□□ -0.29
HMGXB4-203ENST00000420166 HIST1H2BJP06899 126 aa13.26□□□□□ -0.29
HMGXB4-203ENST00000420166 HIST1H2BOP23527 126 aa13.26□□□□□ -0.29
HMGXB4-203ENST00000420166 HIST1H2BBP33778 126 aa13.26□□□□□ -0.29
HMGXB4-203ENST00000420166 HIST1H2BDP58876 126 aa13.26□□□□□ -0.29
HMGXB4-203ENST00000420166 HIST1H2BCP62807 126 aa13.26□□□□□ -0.29
HMGXB4-203ENST00000420166 HAMPP81172 84 aa13.26□□□□□ -0.29
HMGXB4-203ENST00000420166 HIST2H2BEQ16778 126 aa13.26□□□□□ -0.29
HMGXB4-203ENST00000420166 HIST2H2BFQ5QNW6 126 aaPredicted RBP13.26□□□□□ -0.29
HMGXB4-203ENST00000420166 HIST1H2BHQ93079 126 aa13.26□□□□□ -0.29
HMGXB4-203ENST00000420166 CAMK2N2Q96S95 79 aa13.26□□□□□ -0.29
HMGXB4-203ENST00000420166 HIST1H2BNQ99877 126 aa13.26□□□□□ -0.29
HMGXB4-203ENST00000420166 HIST1H2BMQ99879 126 aa13.26□□□□□ -0.29
HMGXB4-203ENST00000420166 IGLV5-45A0A087WSX0 123 aa13.25□□□□□ -0.29
HMGXB4-203ENST00000420166 NUPR1O60356 82 aa13.25□□□□□ -0.29
HMGXB4-203ENST00000420166 LINC00469Q8N7U9 141 aa13.25□□□□□ -0.29
HMGXB4-203ENST00000420166 IFI27L1Q96BM0 104 aa13.25□□□□□ -0.29
HMGXB4-203ENST00000420166 Q6ZRU5 148 aa13.24□□□□□ -0.29
HMGXB4-203ENST00000420166 HSPG2P98160 4391 aa13.24□□□□□ -0.29
HMGXB4-203ENST00000420166 F8WDY8 70 aa13.23□□□□□ -0.29
HMGXB4-203ENST00000420166 IGLC3P0DOY3 106 aa13.23□□□□□ -0.29
HMGXB4-203ENST00000420166 KIAA0087Q14695 138 aa13.23□□□□□ -0.29
HMGXB4-203ENST00000420166 PACRGQ96M98 296 aaPredicted RBP13.22□□□□□ -0.29
HMGXB4-203ENST00000420166 CHAC1Q9BUX1 264 aa13.22□□□□□ -0.29
HMGXB4-203ENST00000420166 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP13.22□□□□□ -0.29
HMGXB4-203ENST00000420166 SCXQ7RTU7 201 aa13.21□□□□□ -0.29
HMGXB4-203ENST00000420166 SMIM1B2RUZ4 78 aa13.2□□□□□ -0.3
HMGXB4-203ENST00000420166 PANO1I0J062 215 aa13.2□□□□□ -0.3
HMGXB4-203ENST00000420166 NDUFA1O15239 70 aa13.2□□□□□ -0.3
HMGXB4-203ENST00000420166 PKIGQ9Y2B9 76 aa13.2□□□□□ -0.3
HMGXB4-203ENST00000420166 DNAH8Q96JB1 4490 aa13.19□□□□□ -0.3
HMGXB4-203ENST00000420166 TRAV12-1A0A0B4J245 112 aa13.19□□□□□ -0.3
HMGXB4-203ENST00000420166 LEPROTL1O95214 131 aa13.19□□□□□ -0.3
HMGXB4-203ENST00000420166 CIRBPQ14011 172 aaKnown RBP13.19□□□□□ -0.3
HMGXB4-203ENST00000420166 RNF151Q2KHN1 245 aa13.19□□□□□ -0.3
HMGXB4-203ENST00000420166 KRTAP17-1Q9BYP8 105 aa13.19□□□□□ -0.3
HMGXB4-203ENST00000420166 MRPL35Q9NZE8 188 aaKnown RBP13.19□□□□□ -0.3
HMGXB4-203ENST00000420166 TOMM7Q9P0U1 55 aa13.19□□□□□ -0.3
HMGXB4-203ENST00000420166 PRSS2P07478 247 aa13.18□□□□□ -0.3
HMGXB4-203ENST00000420166 CHTF8P0CG12 524 aa13.18□□□□□ -0.3
HMGXB4-203ENST00000420166 C10orf25Q5T742 122 aa13.18□□□□□ -0.3
HMGXB4-203ENST00000420166 UNQ6190/PRO20217Q6UXQ8 127 aa13.18□□□□□ -0.3
HMGXB4-203ENST00000420166 Q8IZM0 81 aa13.18□□□□□ -0.3
HMGXB4-203ENST00000420166 CIRBP-AS1Q8TBR5 109 aa13.18□□□□□ -0.3
HMGXB4-203ENST00000420166 H3BRM9 83 aa13.17□□□□□ -0.3
HMGXB4-203ENST00000420166 ZNF22P17026 224 aaPredicted RBP13.17□□□□□ -0.3
HMGXB4-203ENST00000420166 Q8N1X5 172 aa13.17□□□□□ -0.3
HMGXB4-203ENST00000420166 CHTOPQ9Y3Y2 248 aaKnown RBP13.17□□□□□ -0.3
HMGXB4-203ENST00000420166 A0A096LNI7 61 aa13.16□□□□□ -0.3
HMGXB4-203ENST00000420166 C11orf86A6NJI1 115 aa13.16□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 64.4 ms