RNA–Protein interactions for RNA: ENST00000419334.1

EPCAM-203, Transcript of epithelial cell adhesion molecule, humanhuman

TSL 3

Gene EPCAM, Length 609 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPCAM-203ENST00000419334 MALP21145 153 aa11.42□□□□□ -0.58
EPCAM-203ENST00000419334 UBE2D1P51668 147 aa11.42□□□□□ -0.58
EPCAM-203ENST00000419334 RAB5BP61020 215 aa11.42□□□□□ -0.58
EPCAM-203ENST00000419334 SCGB3A1Q96QR1 104 aa11.42□□□□□ -0.58
EPCAM-203ENST00000419334 FAM30AQ9NZY2 134 aa11.42□□□□□ -0.58
EPCAM-203ENST00000419334 COLCA2A8K830 154 aa11.41□□□□□ -0.58
EPCAM-203ENST00000419334 LINC00242Q5T6M2 205 aa11.41□□□□□ -0.58
EPCAM-203ENST00000419334 ZC2HC1BQ5TFG8 222 aa11.41□□□□□ -0.58
EPCAM-203ENST00000419334 C5orf38Q86SI9 138 aa11.41□□□□□ -0.58
EPCAM-203ENST00000419334 APOMO95445 188 aa11.4□□□□□ -0.58
EPCAM-203ENST00000419334 TRGC2P03986 189 aa11.4□□□□□ -0.58
EPCAM-203ENST00000419334 APOBP04114 4563 aaKnown RBP11.4□□□□□ -0.58
EPCAM-203ENST00000419334 A0A096LNJ9 63 aa11.39□□□□□ -0.59
EPCAM-203ENST00000419334 FAM19A3Q7Z5A8 133 aa11.39□□□□□ -0.59
EPCAM-203ENST00000419334 HSPG2P98160 4391 aa11.38□□□□□ -0.59
EPCAM-203ENST00000419334 ZNF561-AS1K7EIQ3 104 aa11.38□□□□□ -0.59
EPCAM-203ENST00000419334 RYR1P21817 5038 aa11.37□□□□□ -0.59
EPCAM-203ENST00000419334 IGHV3-64A0A075B6Q5 118 aa11.37□□□□□ -0.59
EPCAM-203ENST00000419334 A0A087WZ39 114 aa11.37□□□□□ -0.59
EPCAM-203ENST00000419334 HBDP02042 147 aa11.37□□□□□ -0.59
EPCAM-203ENST00000419334 COX6A2Q02221 97 aa11.37□□□□□ -0.59
EPCAM-203ENST00000419334 SDIM1Q6ZPB5 146 aa11.37□□□□□ -0.59
EPCAM-203ENST00000419334 OR10D4PQ8NGN7 298 aa11.37□□□□□ -0.59
EPCAM-203ENST00000419334 LINC00526Q96FQ7 95 aa11.37□□□□□ -0.59
EPCAM-203ENST00000419334 SCO1O75880 301 aa11.36□□□□□ -0.59
EPCAM-203ENST00000419334 CHCHD1Q96BP2 118 aaKnown RBP11.36□□□□□ -0.59
EPCAM-203ENST00000419334 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP11.35□□□□□ -0.59
EPCAM-203ENST00000419334 SEC11AP67812 179 aa11.35□□□□□ -0.59
EPCAM-203ENST00000419334 HAMPP81172 84 aa11.35□□□□□ -0.59
EPCAM-203ENST00000419334 IGLV4-69A0A075B6H9 119 aa11.34□□□□□ -0.59
EPCAM-203ENST00000419334 HERVK_113P63121 156 aa11.34□□□□□ -0.59
EPCAM-203ENST00000419334 SPAG11BQ08648 103 aa11.34□□□□□ -0.59
EPCAM-203ENST00000419334 PMCHL1Q16048 86 aa11.34□□□□□ -0.59
EPCAM-203ENST00000419334 PDZD11Q5EBL8 140 aa11.34□□□□□ -0.59
EPCAM-203ENST00000419334 LINC01561Q8N1V8 128 aa11.34□□□□□ -0.59
EPCAM-203ENST00000419334 Q8N1X5 172 aa11.34□□□□□ -0.59
EPCAM-203ENST00000419334 ORAOV1Q8WV07 137 aa11.34□□□□□ -0.59
EPCAM-203ENST00000419334 C2orf48Q96LS8 159 aa11.34□□□□□ -0.59
EPCAM-203ENST00000419334 CARD19Q96LW7 228 aa11.34□□□□□ -0.59
EPCAM-203ENST00000419334 SYCNQ0VAF6 134 aa11.33□□□□□ -0.6
EPCAM-203ENST00000419334 PMVKQ15126 192 aa11.33□□□□□ -0.6
EPCAM-203ENST00000419334 CHAC1Q9BUX1 264 aa11.33□□□□□ -0.6
EPCAM-203ENST00000419334 CST9LQ9H4G1 147 aa11.33□□□□□ -0.6
EPCAM-203ENST00000419334 SCXQ7RTU7 201 aa11.32□□□□□ -0.6
EPCAM-203ENST00000419334 BAGE3Q86Y29 109 aa11.32□□□□□ -0.6
EPCAM-203ENST00000419334 DNAH8Q96JB1 4490 aa11.32□□□□□ -0.6
EPCAM-203ENST00000419334 A0A0J9YXV3 536 aa11.31□□□□□ -0.6
EPCAM-203ENST00000419334 ATP5LO75964 103 aa11.31□□□□□ -0.6
EPCAM-203ENST00000419334 CAMK2N2Q96S95 79 aa11.31□□□□□ -0.6
EPCAM-203ENST00000419334 GEMIN7Q9H840 131 aaKnown RBP11.31□□□□□ -0.6
EPCAM-203ENST00000419334 TINCRA0A1B0GVN0 87 aa11.3□□□□□ -0.6
EPCAM-203ENST00000419334 F8WDY8 70 aa11.3□□□□□ -0.6
EPCAM-203ENST00000419334 CIRBPQ14011 172 aaKnown RBP11.3□□□□□ -0.6
EPCAM-203ENST00000419334 Q6ZRU5 148 aa11.3□□□□□ -0.6
EPCAM-203ENST00000419334 CDKN2A-AS1Q9UH64 79 aa11.3□□□□□ -0.6
EPCAM-203ENST00000419334 PKIGQ9Y2B9 76 aa11.3□□□□□ -0.6
EPCAM-203ENST00000419334 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP11.3□□□□□ -0.6
EPCAM-203ENST00000419334 HSBP1O75506 76 aa11.29□□□□□ -0.6
EPCAM-203ENST00000419334 CIRBP-AS1Q8TBR5 109 aa11.29□□□□□ -0.6
EPCAM-203ENST00000419334 IGLV5-45A0A087WSX0 123 aa11.28□□□□□ -0.6
EPCAM-203ENST00000419334 PANO1I0J062 215 aa11.28□□□□□ -0.6
EPCAM-203ENST00000419334 KIAA0087Q14695 138 aa11.28□□□□□ -0.6
EPCAM-203ENST00000419334 SMR3BP02814 79 aaPredicted RBP11.27□□□□□ -0.61
EPCAM-203ENST00000419334 LINC00310P59036 64 aa11.27□□□□□ -0.61
EPCAM-203ENST00000419334 NDUFA1O15239 70 aa11.26□□□□□ -0.61
EPCAM-203ENST00000419334 SERF1AO75920 110 aa11.26□□□□□ -0.61
EPCAM-203ENST00000419334 S100A1P23297 94 aa11.26□□□□□ -0.61
EPCAM-203ENST00000419334 NDUFA6P56556 154 aa11.26□□□□□ -0.61
EPCAM-203ENST00000419334 RNF151Q2KHN1 245 aa11.26□□□□□ -0.61
EPCAM-203ENST00000419334 LINC00469Q8N7U9 141 aa11.26□□□□□ -0.61
EPCAM-203ENST00000419334 SPACA4Q8TDM5 124 aa11.26□□□□□ -0.61
EPCAM-203ENST00000419334 PACRGQ96M98 296 aaPredicted RBP11.26□□□□□ -0.61
EPCAM-203ENST00000419334 MRPL35Q9NZE8 188 aaKnown RBP11.26□□□□□ -0.61
EPCAM-203ENST00000419334 CHTF8P0CG12 524 aa11.25□□□□□ -0.61
EPCAM-203ENST00000419334 IGLC3P0DOY3 106 aa11.25□□□□□ -0.61
EPCAM-203ENST00000419334 FAM19A2Q8N3H0 131 aa11.25□□□□□ -0.61
EPCAM-203ENST00000419334 KRTAP4-5Q9BYR2 181 aa11.25□□□□□ -0.61
EPCAM-203ENST00000419334 A0A096LNI7 61 aa11.24□□□□□ -0.61
EPCAM-203ENST00000419334 EPM2AB3EWF7 344 aa11.24□□□□□ -0.61
EPCAM-203ENST00000419334 Q8IZM0 81 aa11.24□□□□□ -0.61
EPCAM-203ENST00000419334 IFI27L1Q96BM0 104 aa11.24□□□□□ -0.61
EPCAM-203ENST00000419334 LOC107984640A0A0U1RRK4 108 aa11.23□□□□□ -0.61
EPCAM-203ENST00000419334 ATP6V1G1O75348 118 aa11.23□□□□□ -0.61
EPCAM-203ENST00000419334 Q5VSD8 79 aa11.23□□□□□ -0.61
EPCAM-203ENST00000419334 IGKV2-24A0A0C4DH68 120 aa11.22□□□□□ -0.61
EPCAM-203ENST00000419334 SMIM1B2RUZ4 78 aa11.22□□□□□ -0.61
EPCAM-203ENST00000419334 FAM229AH3BQW9 127 aa11.22□□□□□ -0.61
EPCAM-203ENST00000419334 HIST1H2BKO60814 126 aa11.22□□□□□ -0.61
EPCAM-203ENST00000419334 HIST1H2BJP06899 126 aa11.22□□□□□ -0.61
EPCAM-203ENST00000419334 PRSS2P07478 247 aa11.22□□□□□ -0.61
EPCAM-203ENST00000419334 HIST1H2BOP23527 126 aa11.22□□□□□ -0.61
EPCAM-203ENST00000419334 HIST1H2BBP33778 126 aa11.22□□□□□ -0.61
EPCAM-203ENST00000419334 HIST1H2BDP58876 126 aa11.22□□□□□ -0.61
EPCAM-203ENST00000419334 HIST1H2BCP62807 126 aa11.22□□□□□ -0.61
EPCAM-203ENST00000419334 HIST2H2BEQ16778 126 aa11.22□□□□□ -0.61
EPCAM-203ENST00000419334 HIST2H2BFQ5QNW6 126 aaPredicted RBP11.22□□□□□ -0.61
EPCAM-203ENST00000419334 C10orf25Q5T742 122 aa11.22□□□□□ -0.61
EPCAM-203ENST00000419334 UNQ6190/PRO20217Q6UXQ8 127 aa11.22□□□□□ -0.61
EPCAM-203ENST00000419334 HIST1H2BHQ93079 126 aa11.22□□□□□ -0.61
EPCAM-203ENST00000419334 HIST1H2BNQ99877 126 aa11.22□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 54.2 ms