RNA–Protein interactions for RNA: ENST00000419181.5

GTF3A-202, Transcript of general transcription factor IIIA, humanhuman

TSL 1 (best)

Gene GTF3A, Length 1,191 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3A-202ENST00000419181 IGHV3OR16-9A0A0B4J2B5 98 aa12.89□□□□□ -0.35
GTF3A-202ENST00000419181 KIAA1644Q3SXP7 199 aa12.89□□□□□ -0.35
GTF3A-202ENST00000419181 ORMDL2Q53FV1 153 aa12.89□□□□□ -0.35
GTF3A-202ENST00000419181 C2orf66Q6UXQ4 117 aa12.89□□□□□ -0.35
GTF3A-202ENST00000419181 DPH3Q96FX2 82 aa12.89□□□□□ -0.35
GTF3A-202ENST00000419181 CYSLTR1Q9Y271 337 aa12.89□□□□□ -0.35
GTF3A-202ENST00000419181 APOMO95445 188 aa12.88□□□□□ -0.35
GTF3A-202ENST00000419181 TMEM141Q96I45 108 aa12.88□□□□□ -0.35
GTF3A-202ENST00000419181 GNB1LQ9BYB4 327 aa12.88□□□□□ -0.35
GTF3A-202ENST00000419181 PLAC8Q9NZF1 115 aa12.88□□□□□ -0.35
GTF3A-202ENST00000419181 A0A096LNI7 61 aa12.87□□□□□ -0.35
GTF3A-202ENST00000419181 IGKV2-24A0A0C4DH68 120 aa12.87□□□□□ -0.35
GTF3A-202ENST00000419181 RPL37AP61513 92 aaKnown RBP12.87□□□□□ -0.35
GTF3A-202ENST00000419181 PKIGQ9Y2B9 76 aa12.87□□□□□ -0.35
GTF3A-202ENST00000419181 C2orf48Q96LS8 159 aa12.86□□□□□ -0.35
GTF3A-202ENST00000419181 RPS10P5Q9NQ39 176 aa12.86□□□□□ -0.35
GTF3A-202ENST00000419181 J3QL48 77 aa12.85□□□□□ -0.35
GTF3A-202ENST00000419181 MAJINQ3KP22 176 aa12.85□□□□□ -0.35
GTF3A-202ENST00000419181 COX19Q49B96 90 aa12.85□□□□□ -0.35
GTF3A-202ENST00000419181 Q6ZRU5 148 aa12.85□□□□□ -0.35
GTF3A-202ENST00000419181 OR10D4PQ8NGN7 298 aa12.85□□□□□ -0.35
GTF3A-202ENST00000419181 HERC1Q15751 4861 aa12.85□□□□□ -0.35
GTF3A-202ENST00000419181 NPSP0C0P6 89 aa12.84□□□□□ -0.35
GTF3A-202ENST00000419181 SPAG11BQ08648 103 aa12.84□□□□□ -0.35
GTF3A-202ENST00000419181 LINC00242Q5T6M2 205 aa12.84□□□□□ -0.35
GTF3A-202ENST00000419181 TEX43Q6ZNM6 134 aa12.84□□□□□ -0.35
GTF3A-202ENST00000419181 CAMK2N2Q96S95 79 aa12.84□□□□□ -0.35
GTF3A-202ENST00000419181 IGIPA6NJ69 53 aa12.83□□□□□ -0.36
GTF3A-202ENST00000419181 LINC00173Q6ZV60 143 aa12.83□□□□□ -0.36
GTF3A-202ENST00000419181 LINC00474Q9P2X8 69 aa12.83□□□□□ -0.36
GTF3A-202ENST00000419181 TGIF2-C20orf24A0A0A6YYL0 155 aa12.82□□□□□ -0.36
GTF3A-202ENST00000419181 MT-ND6P03923 174 aa12.82□□□□□ -0.36
GTF3A-202ENST00000419181 Q6ZN92 141 aa12.82□□□□□ -0.36
GTF3A-202ENST00000419181 STPG4Q8N801 248 aa12.82□□□□□ -0.36
GTF3A-202ENST00000419181 ORAOV1Q8WV07 137 aa12.82□□□□□ -0.36
GTF3A-202ENST00000419181 AMELXQ99217 191 aa12.82□□□□□ -0.36
GTF3A-202ENST00000419181 ALKBH7Q9BT30 221 aaPredicted RBP12.82□□□□□ -0.36
GTF3A-202ENST00000419181 A0A087WZ39 114 aa12.81□□□□□ -0.36
GTF3A-202ENST00000419181 G0S2P27469 103 aa12.81□□□□□ -0.36
GTF3A-202ENST00000419181 UBE2D1P51668 147 aa12.81□□□□□ -0.36
GTF3A-202ENST00000419181 C2orf88Q9BSF0 95 aa12.81□□□□□ -0.36
GTF3A-202ENST00000419181 ZC2HC1BQ5TFG8 222 aa12.8□□□□□ -0.36
GTF3A-202ENST00000419181 TOMM6Q96B49 74 aa12.8□□□□□ -0.36
GTF3A-202ENST00000419181 MRPL18Q9H0U6 180 aaKnown RBP12.8□□□□□ -0.36
GTF3A-202ENST00000419181 VCX2Q9H322 139 aa12.8□□□□□ -0.36
GTF3A-202ENST00000419181 LOC107984640A0A0U1RRK4 108 aa12.79□□□□□ -0.36
GTF3A-202ENST00000419181 LINC01546A6NGU7 62 aa12.79□□□□□ -0.36
GTF3A-202ENST00000419181 APOC3P02656 99 aa12.79□□□□□ -0.36
GTF3A-202ENST00000419181 PTTG1IPP53801 180 aa12.79□□□□□ -0.36
GTF3A-202ENST00000419181 TIMM17AQ99595 171 aa12.79□□□□□ -0.36
GTF3A-202ENST00000419181 KRTAP29-1A8MX34 341 aaPredicted RBP12.78□□□□□ -0.36
GTF3A-202ENST00000419181 F8WDY8 70 aa12.78□□□□□ -0.36
GTF3A-202ENST00000419181 HNRNPA3P51991 378 aaKnown RBP12.78□□□□□ -0.36
GTF3A-202ENST00000419181 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP12.77□□□□□ -0.37
GTF3A-202ENST00000419181 FABP9Q0Z7S8 132 aa12.77□□□□□ -0.37
GTF3A-202ENST00000419181 RNF151Q2KHN1 245 aa12.77□□□□□ -0.37
GTF3A-202ENST00000419181 FAM19A3Q7Z5A8 133 aa12.77□□□□□ -0.37
GTF3A-202ENST00000419181 MRPL35Q9NZE8 188 aaKnown RBP12.77□□□□□ -0.37
GTF3A-202ENST00000419181 SNAPINO95295 136 aa12.76□□□□□ -0.37
GTF3A-202ENST00000419181 NDUFA5Q16718 116 aa12.76□□□□□ -0.37
GTF3A-202ENST00000419181 PAPPA-AS1Q5QFB9 102 aa12.76□□□□□ -0.37
GTF3A-202ENST00000419181 SVBPQ8N300 66 aa12.76□□□□□ -0.37
GTF3A-202ENST00000419181 C7orf33Q8WU49 177 aa12.76□□□□□ -0.37
GTF3A-202ENST00000419181 PKHD1L1Q86WI1 4243 aa12.76□□□□□ -0.37
GTF3A-202ENST00000419181 NDUFA1O15239 70 aa12.75□□□□□ -0.37
GTF3A-202ENST00000419181 GAGE2BQ13066 116 aa12.75□□□□□ -0.37
GTF3A-202ENST00000419181 KIAA0087Q14695 138 aa12.75□□□□□ -0.37
GTF3A-202ENST00000419181 ERASQ7Z444 233 aa12.75□□□□□ -0.37
GTF3A-202ENST00000419181 LINC01561Q8N1V8 128 aa12.75□□□□□ -0.37
GTF3A-202ENST00000419181 LRP1Q07954 4544 aaKnown RBP12.75□□□□□ -0.37
GTF3A-202ENST00000419181 A0A0J9YXV3 536 aa12.74□□□□□ -0.37
GTF3A-202ENST00000419181 C10orf25Q5T742 122 aa12.73□□□□□ -0.37
GTF3A-202ENST00000419181 SCGB3A1Q96QR1 104 aa12.73□□□□□ -0.37
GTF3A-202ENST00000419181 LINC01549A6NIU2 74 aa12.72□□□□□ -0.37
GTF3A-202ENST00000419181 RPL18AQ02543 176 aaKnown RBP12.72□□□□□ -0.37
GTF3A-202ENST00000419181 UNQ6190/PRO20217Q6UXQ8 127 aa12.72□□□□□ -0.37
GTF3A-202ENST00000419181 SEC11AP67812 179 aa12.71□□□□□ -0.37
GTF3A-202ENST00000419181 FA2HQ7L5A8 372 aa12.71□□□□□ -0.37
GTF3A-202ENST00000419181 C6orf48Q9UBA6 75 aa12.71□□□□□ -0.37
GTF3A-202ENST00000419181 TRAPPC1Q9Y5R8 145 aa12.71□□□□□ -0.37
GTF3A-202ENST00000419181 OXTP01178 125 aa12.7□□□□□ -0.38
GTF3A-202ENST00000419181 HERVK_113P63121 156 aa12.7□□□□□ -0.38
GTF3A-202ENST00000419181 PRR3P79522 188 aaKnown RBP12.69□□□□□ -0.38
GTF3A-202ENST00000419181 SMCO4Q9NRQ5 59 aa12.69□□□□□ -0.38
GTF3A-202ENST00000419181 FAT3Q8TDW7 4589 aa12.69□□□□□ -0.38
GTF3A-202ENST00000419181 A0A1W2PNN7 141 aa12.68□□□□□ -0.38
GTF3A-202ENST00000419181 TLX1NBP0CAT3 122 aa12.68□□□□□ -0.38
GTF3A-202ENST00000419181 C2orf82Q6UX34 121 aa12.68□□□□□ -0.38
GTF3A-202ENST00000419181 C18orf32Q8TCD1 76 aa12.68□□□□□ -0.38
GTF3A-202ENST00000419181 CDKN2A-AS1Q9UH64 79 aa12.68□□□□□ -0.38
GTF3A-202ENST00000419181 YPEL4Q96NS1 127 aa12.67□□□□□ -0.38
GTF3A-202ENST00000419181 GEMIN7Q9H840 131 aaKnown RBP12.67□□□□□ -0.38
GTF3A-202ENST00000419181 TRBV30A0A0K0K1B3 111 aa12.66□□□□□ -0.38
GTF3A-202ENST00000419181 C9orf116Q5BN46 136 aaPredicted RBP12.66□□□□□ -0.38
GTF3A-202ENST00000419181 Q6ZRP5 223 aa12.66□□□□□ -0.38
GTF3A-202ENST00000419181 URB1-AS1Q96HZ7 61 aa12.66□□□□□ -0.38
GTF3A-202ENST00000419181 Q8IZM0 81 aa12.65□□□□□ -0.38
GTF3A-202ENST00000419181 CST9LQ9H4G1 147 aa12.65□□□□□ -0.38
GTF3A-202ENST00000419181 A0A096LNJ9 63 aa12.64□□□□□ -0.39
GTF3A-202ENST00000419181 TINCRA0A1B0GVN0 87 aa12.63□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 64.6 ms