RNA–Protein interactions for RNA: ENST00000417389.1

TM9SF4-203, Transcript of transmembrane 9 superfamily member 4, humanhuman

TSL 4

Gene TM9SF4, Length 553 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF4-203ENST00000417389 C2orf88Q9BSF0 95 aa7.15□□□□□ -1.26
TM9SF4-203ENST00000417389 CHAC1Q9BUX1 264 aa7.15□□□□□ -1.26
TM9SF4-203ENST00000417389 RAB5BP61020 215 aa7.14□□□□□ -1.27
TM9SF4-203ENST00000417389 TEX43Q6ZNM6 134 aa7.14□□□□□ -1.27
TM9SF4-203ENST00000417389 Q6ZSA8 131 aa7.14□□□□□ -1.27
TM9SF4-203ENST00000417389 TMEM141Q96I45 108 aa7.14□□□□□ -1.27
TM9SF4-203ENST00000417389 KRTAP17-1Q9BYP8 105 aa7.14□□□□□ -1.27
TM9SF4-203ENST00000417389 VCX2Q9H322 139 aa7.14□□□□□ -1.27
TM9SF4-203ENST00000417389 DNAH8Q96JB1 4490 aa7.13□□□□□ -1.27
TM9SF4-203ENST00000417389 IGLV4-3A0A075B6K6 122 aa7.13□□□□□ -1.27
TM9SF4-203ENST00000417389 LINC01546A6NGU7 62 aa7.13□□□□□ -1.27
TM9SF4-203ENST00000417389 SLPIP03973 132 aa7.13□□□□□ -1.27
TM9SF4-203ENST00000417389 LINC00528Q8N1L1 170 aa7.13□□□□□ -1.27
TM9SF4-203ENST00000417389 CIRBP-AS1Q8TBR5 109 aa7.13□□□□□ -1.27
TM9SF4-203ENST00000417389 CARD19Q96LW7 228 aa7.13□□□□□ -1.27
TM9SF4-203ENST00000417389 PYGO1Q9Y3Y4 419 aa7.13□□□□□ -1.27
TM9SF4-203ENST00000417389 IGKV2-24A0A0C4DH68 120 aa7.12□□□□□ -1.27
TM9SF4-203ENST00000417389 COX6A2Q02221 97 aa7.12□□□□□ -1.27
TM9SF4-203ENST00000417389 SDIM1Q6ZPB5 146 aa7.12□□□□□ -1.27
TM9SF4-203ENST00000417389 BAGE3Q86Y29 109 aa7.12□□□□□ -1.27
TM9SF4-203ENST00000417389 CAMK2N2Q96S95 79 aa7.12□□□□□ -1.27
TM9SF4-203ENST00000417389 FAT1Q14517 4588 aa7.12□□□□□ -1.27
TM9SF4-203ENST00000417389 IGLV4-69A0A075B6H9 119 aa7.11□□□□□ -1.27
TM9SF4-203ENST00000417389 PLA2G1BP04054 148 aaKnown RBP7.11□□□□□ -1.27
TM9SF4-203ENST00000417389 LINC00614P0C842 121 aa7.11□□□□□ -1.27
TM9SF4-203ENST00000417389 INAFM2P0DMQ5 153 aa7.11□□□□□ -1.27
TM9SF4-203ENST00000417389 SPAG11BQ08648 103 aa7.11□□□□□ -1.27
TM9SF4-203ENST00000417389 SYCNQ0VAF6 134 aa7.11□□□□□ -1.27
TM9SF4-203ENST00000417389 PAPPA-AS1Q5QFB9 102 aa7.11□□□□□ -1.27
TM9SF4-203ENST00000417389 ORAOV1Q8WV07 137 aa7.11□□□□□ -1.27
TM9SF4-203ENST00000417389 URB1-AS1Q96HZ7 61 aa7.11□□□□□ -1.27
TM9SF4-203ENST00000417389 SCGB3A1Q96QR1 104 aa7.11□□□□□ -1.27
TM9SF4-203ENST00000417389 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP7.11□□□□□ -1.27
TM9SF4-203ENST00000417389 ABCA13Q86UQ4 5058 aa7.1□□□□□ -1.27
TM9SF4-203ENST00000417389 LINC01549A6NIU2 74 aa7.1□□□□□ -1.27
TM9SF4-203ENST00000417389 CHTF8P0CG12 524 aa7.1□□□□□ -1.27
TM9SF4-203ENST00000417389 ZC2HC1BQ5TFG8 222 aa7.1□□□□□ -1.27
TM9SF4-203ENST00000417389 FAM104AQ969W3 186 aa7.1□□□□□ -1.27
TM9SF4-203ENST00000417389 TOMM6Q96B49 74 aa7.1□□□□□ -1.27
TM9SF4-203ENST00000417389 CHCHD1Q96BP2 118 aaKnown RBP7.1□□□□□ -1.27
TM9SF4-203ENST00000417389 PKIGQ9Y2B9 76 aa7.1□□□□□ -1.27
TM9SF4-203ENST00000417389 HSBP1O75506 76 aa7.09□□□□□ -1.27
TM9SF4-203ENST00000417389 HBDP02042 147 aa7.09□□□□□ -1.27
TM9SF4-203ENST00000417389 MAJINQ3KP22 176 aa7.09□□□□□ -1.27
TM9SF4-203ENST00000417389 TIMM17AQ99595 171 aa7.09□□□□□ -1.27
TM9SF4-203ENST00000417389 IGHV3OR16-9A0A0B4J2B5 98 aa7.08□□□□□ -1.28
TM9SF4-203ENST00000417389 PANO1I0J062 215 aa7.08□□□□□ -1.28
TM9SF4-203ENST00000417389 HIST1H2BKO60814 126 aa7.08□□□□□ -1.28
TM9SF4-203ENST00000417389 HIST1H2BJP06899 126 aa7.08□□□□□ -1.28
TM9SF4-203ENST00000417389 NPSP0C0P6 89 aa7.08□□□□□ -1.28
TM9SF4-203ENST00000417389 HIST1H2BOP23527 126 aa7.08□□□□□ -1.28
TM9SF4-203ENST00000417389 HIST1H2BBP33778 126 aa7.08□□□□□ -1.28
TM9SF4-203ENST00000417389 UBE2D1P51668 147 aa7.08□□□□□ -1.28
TM9SF4-203ENST00000417389 HIST1H2BDP58876 126 aa7.08□□□□□ -1.28
TM9SF4-203ENST00000417389 HIST1H2BCP62807 126 aa7.08□□□□□ -1.28
TM9SF4-203ENST00000417389 PMCHL1Q16048 86 aa7.08□□□□□ -1.28
TM9SF4-203ENST00000417389 HIST2H2BEQ16778 126 aa7.08□□□□□ -1.28
TM9SF4-203ENST00000417389 HIST2H2BFQ5QNW6 126 aaPredicted RBP7.08□□□□□ -1.28
TM9SF4-203ENST00000417389 LINC00242Q5T6M2 205 aa7.08□□□□□ -1.28
TM9SF4-203ENST00000417389 ERASQ7Z444 233 aa7.08□□□□□ -1.28
TM9SF4-203ENST00000417389 OR10D4PQ8NGN7 298 aa7.08□□□□□ -1.28
TM9SF4-203ENST00000417389 HIST1H2BHQ93079 126 aa7.08□□□□□ -1.28
TM9SF4-203ENST00000417389 HIST1H2BNQ99877 126 aa7.08□□□□□ -1.28
TM9SF4-203ENST00000417389 HIST1H2BMQ99879 126 aa7.08□□□□□ -1.28
TM9SF4-203ENST00000417389 GEMIN7Q9H840 131 aaKnown RBP7.08□□□□□ -1.28
TM9SF4-203ENST00000417389 PCLOQ9Y6V0 5065 aa7.07□□□□□ -1.28
TM9SF4-203ENST00000417389 A0A096LNJ9 63 aa7.07□□□□□ -1.28
TM9SF4-203ENST00000417389 IGIPA6NJ69 53 aa7.07□□□□□ -1.28
TM9SF4-203ENST00000417389 SERF1AO75920 110 aa7.07□□□□□ -1.28
TM9SF4-203ENST00000417389 GAGE2BQ13066 116 aa7.07□□□□□ -1.28
TM9SF4-203ENST00000417389 Q6ZRU5 148 aa7.07□□□□□ -1.28
TM9SF4-203ENST00000417389 A0A087WYN8 130 aa7.06□□□□□ -1.28
TM9SF4-203ENST00000417389 PRSS2P07478 247 aa7.06□□□□□ -1.28
TM9SF4-203ENST00000417389 NDUFA6P56556 154 aa7.06□□□□□ -1.28
TM9SF4-203ENST00000417389 SEC11AP67812 179 aa7.06□□□□□ -1.28
TM9SF4-203ENST00000417389 RPL18AQ02543 176 aaKnown RBP7.06□□□□□ -1.28
TM9SF4-203ENST00000417389 LINC00173Q6ZV60 143 aa7.06□□□□□ -1.28
TM9SF4-203ENST00000417389 SPACA4Q8TDM5 124 aa7.06□□□□□ -1.28
TM9SF4-203ENST00000417389 C2orf48Q96LS8 159 aa7.06□□□□□ -1.28
TM9SF4-203ENST00000417389 PACRGQ96M98 296 aaPredicted RBP7.06□□□□□ -1.28
TM9SF4-203ENST00000417389 AMELXQ99217 191 aa7.06□□□□□ -1.28
TM9SF4-203ENST00000417389 TOMM7Q9P0U1 55 aa7.06□□□□□ -1.28
TM9SF4-203ENST00000417389 LINC00474Q9P2X8 69 aa7.06□□□□□ -1.28
TM9SF4-203ENST00000417389 A0A087WZ39 114 aa7.05□□□□□ -1.28
TM9SF4-203ENST00000417389 A0A096LNI7 61 aa7.05□□□□□ -1.28
TM9SF4-203ENST00000417389 A0A0J9YXV3 536 aa7.05□□□□□ -1.28
TM9SF4-203ENST00000417389 LOC107984640A0A0U1RRK4 108 aa7.05□□□□□ -1.28
TM9SF4-203ENST00000417389 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP7.05□□□□□ -1.28
TM9SF4-203ENST00000417389 NDUFA1O15239 70 aa7.05□□□□□ -1.28
TM9SF4-203ENST00000417389 LINC00310P59036 64 aa7.05□□□□□ -1.28
TM9SF4-203ENST00000417389 RPL37AP61513 92 aaKnown RBP7.05□□□□□ -1.28
TM9SF4-203ENST00000417389 HERVK_113P63121 156 aa7.05□□□□□ -1.28
TM9SF4-203ENST00000417389 STPG4Q8N801 248 aa7.05□□□□□ -1.28
TM9SF4-203ENST00000417389 SRRM2Q9UQ35 2752 aaKnown RBP7.05□□□□□ -1.28
TM9SF4-203ENST00000417389 ATP5LO75964 103 aa7.04□□□□□ -1.28
TM9SF4-203ENST00000417389 PDZD11Q5EBL8 140 aa7.04□□□□□ -1.28
TM9SF4-203ENST00000417389 LINC00469Q8N7U9 141 aa7.04□□□□□ -1.28
TM9SF4-203ENST00000417389 C7orf33Q8WU49 177 aa7.04□□□□□ -1.28
TM9SF4-203ENST00000417389 CKS1BP61024 79 aa7.03□□□□□ -1.28
TM9SF4-203ENST00000417389 CIRBPQ14011 172 aaKnown RBP7.03□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms