RNA–Protein interactions for RNA: ENST00000413987.1

SNHG3-201, Transcript of small nucleolar RNA host gene 3, humanhuman

TSL 1 (best)

Gene SNHG3, Length 2,201 nt, Biotype retained intron, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG3-201ENST00000413987 LGALS9O00182 355 aa6.81□□□□□ -1.32
SNHG3-201ENST00000413987 LGALS3P17931 250 aaKnown RBP6.81□□□□□ -1.32
SNHG3-201ENST00000413987 AGPAT4-IT1Q9H0P7 198 aa6.81□□□□□ -1.32
SNHG3-201ENST00000413987 A8MUN3 132 aa6.81□□□□□ -1.32
SNHG3-201ENST00000413987 PRAC2D3DTV9 90 aa6.81□□□□□ -1.32
SNHG3-201ENST00000413987 LST1O00453 97 aa6.81□□□□□ -1.32
SNHG3-201ENST00000413987 RBMY1FQ15415 496 aaKnown RBP6.81□□□□□ -1.32
SNHG3-201ENST00000413987 TMEM263Q8WUH6 116 aaKnown RBP6.81□□□□□ -1.32
SNHG3-201ENST00000413987 LENEPQ9Y5L5 61 aa6.81□□□□□ -1.32
SNHG3-201ENST00000413987 IGLV4-69A0A075B6H9 119 aa6.8□□□□□ -1.32
SNHG3-201ENST00000413987 IGHV3-35A0A0C4DH35 117 aa6.8□□□□□ -1.32
SNHG3-201ENST00000413987 DNAJC9-AS1A6NH13 148 aa6.8□□□□□ -1.32
SNHG3-201ENST00000413987 RNASE1P07998 156 aaKnown RBP6.8□□□□□ -1.32
SNHG3-201ENST00000413987 C9orf47Q6ZRZ4 202 aa6.8□□□□□ -1.32
SNHG3-201ENST00000413987 IGHV3OR16-8A0A075B7F1 116 aa6.8□□□□□ -1.32
SNHG3-201ENST00000413987 TRBV30A0A0K0K1B3 111 aa6.8□□□□□ -1.32
SNHG3-201ENST00000413987 H3BT86 120 aa6.8□□□□□ -1.32
SNHG3-201ENST00000413987 CTSGP08311 255 aa6.8□□□□□ -1.32
SNHG3-201ENST00000413987 CRIP2P52943 208 aaPredicted RBP6.8□□□□□ -1.32
SNHG3-201ENST00000413987 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa6.8□□□□□ -1.32
SNHG3-201ENST00000413987 TIMM17AQ99595 171 aa6.8□□□□□ -1.32
SNHG3-201ENST00000413987 TRAV41A0A0B4J266 112 aa6.79□□□□□ -1.32
SNHG3-201ENST00000413987 Q1RN00 199 aa6.79□□□□□ -1.32
SNHG3-201ENST00000413987 Q6ZQT7 251 aa6.79□□□□□ -1.32
SNHG3-201ENST00000413987 TRBV7-7A0A0K0K1E9 115 aa6.78□□□□□ -1.32
SNHG3-201ENST00000413987 LEPROTO15243 131 aa6.78□□□□□ -1.32
SNHG3-201ENST00000413987 DUSP14O95147 198 aaKnown RBP6.78□□□□□ -1.32
SNHG3-201ENST00000413987 C15orf32Q32M92 178 aa6.78□□□□□ -1.32
SNHG3-201ENST00000413987 TMEM170BQ5T4T1 132 aa6.78□□□□□ -1.32
SNHG3-201ENST00000413987 C2CD3Q4AC94 2353 aa6.78□□□□□ -1.32
SNHG3-201ENST00000413987 TEX49A0A1B0GTD5 131 aa6.78□□□□□ -1.32
SNHG3-201ENST00000413987 IGIPA6NJ69 53 aa6.78□□□□□ -1.32
SNHG3-201ENST00000413987 TSHBP01222 138 aa6.78□□□□□ -1.32
SNHG3-201ENST00000413987 IGHV3-11P01762 117 aa6.78□□□□□ -1.32
SNHG3-201ENST00000413987 LINC00313P59037 77 aa6.78□□□□□ -1.32
SNHG3-201ENST00000413987 C2orf82Q6UX34 121 aa6.78□□□□□ -1.32
SNHG3-201ENST00000413987 ZNF702PQ9H963 129 aa6.78□□□□□ -1.32
SNHG3-201ENST00000413987 ATRQ13535 2644 aa6.78□□□□□ -1.32
SNHG3-201ENST00000413987 VWFP04275 2813 aa6.78□□□□□ -1.32
SNHG3-201ENST00000413987 A0A0J9YX75 114 aa6.77□□□□□ -1.33
SNHG3-201ENST00000413987 M0R2P5 195 aa6.77□□□□□ -1.33
SNHG3-201ENST00000413987 COX6CP09669 75 aa6.77□□□□□ -1.33
SNHG3-201ENST00000413987 S100A4P26447 101 aaKnown RBP6.77□□□□□ -1.33
SNHG3-201ENST00000413987 REG3AQ06141 175 aa6.77□□□□□ -1.33
SNHG3-201ENST00000413987 ODF3L2Q3SX64 289 aa6.77□□□□□ -1.33
SNHG3-201ENST00000413987 DEFB121Q5J5C9 76 aa6.77□□□□□ -1.33
SNHG3-201ENST00000413987 RNF182Q8N6D2 247 aa6.77□□□□□ -1.33
SNHG3-201ENST00000413987 POM121L12Q8N7R1 296 aa6.77□□□□□ -1.33
SNHG3-201ENST00000413987 RPL39LQ96EH5 51 aaKnown RBP6.77□□□□□ -1.33
SNHG3-201ENST00000413987 AMELXQ99217 191 aa6.77□□□□□ -1.33
SNHG3-201ENST00000413987 TMEM243Q9BU79 118 aa6.77□□□□□ -1.33
SNHG3-201ENST00000413987 UBE2L6O14933 153 aa6.77□□□□□ -1.33
SNHG3-201ENST00000413987 ACYP1P07311 99 aa6.77□□□□□ -1.33
SNHG3-201ENST00000413987 MGPP08493 103 aa6.77□□□□□ -1.33
SNHG3-201ENST00000413987 DCANP1Q8TF63 244 aa6.77□□□□□ -1.33
SNHG3-201ENST00000413987 PHLDA3Q9Y5J5 127 aa6.77□□□□□ -1.33
SNHG3-201ENST00000413987 FBN1P35555 2871 aaKnown RBP6.76□□□□□ -1.33
SNHG3-201ENST00000413987 TRAV21A0A0B4J279 112 aa6.76□□□□□ -1.33
SNHG3-201ENST00000413987 KRTAP23-1A1A580 65 aa6.76□□□□□ -1.33
SNHG3-201ENST00000413987 SDHAF1A6NFY7 115 aa6.76□□□□□ -1.33
SNHG3-201ENST00000413987 TSPEAR-AS2P59090 65 aa6.76□□□□□ -1.33
SNHG3-201ENST00000413987 ZNF876PQ49A33 203 aa6.76□□□□□ -1.33
SNHG3-201ENST00000413987 MUSTN1Q8IVN3 82 aa6.76□□□□□ -1.33
SNHG3-201ENST00000413987 C14orf178Q8N769 122 aaPredicted RBP6.76□□□□□ -1.33
SNHG3-201ENST00000413987 IGHV4OR15-8A0A075B7B6 117 aa6.76□□□□□ -1.33
SNHG3-201ENST00000413987 A0A087WW49 117 aa6.76□□□□□ -1.33
SNHG3-201ENST00000413987 H7C2G1 150 aa6.76□□□□□ -1.33
SNHG3-201ENST00000413987 ZNF56Q15929 161 aa6.76□□□□□ -1.33
SNHG3-201ENST00000413987 C9orf153Q5TBE3 101 aa6.76□□□□□ -1.33
SNHG3-201ENST00000413987 GPHB5Q86YW7 130 aa6.76□□□□□ -1.33
SNHG3-201ENST00000413987 TRRAPQ9Y4A5 3859 aa6.75□□□□□ -1.33
SNHG3-201ENST00000413987 IGHV1-58A0A0C4DH39 117 aa6.75□□□□□ -1.33
SNHG3-201ENST00000413987 COX7A2LO14548 114 aa6.75□□□□□ -1.33
SNHG3-201ENST00000413987 NXPH4O95158 308 aa6.75□□□□□ -1.33
SNHG3-201ENST00000413987 INAFM2P0DMQ5 153 aa6.75□□□□□ -1.33
SNHG3-201ENST00000413987 TMEM223A0PJW6 202 aa6.74□□□□□ -1.33
SNHG3-201ENST00000413987 UQCRQO14949 82 aa6.74□□□□□ -1.33
SNHG3-201ENST00000413987 ZNF73O43830 326 aaPredicted RBP6.74□□□□□ -1.33
SNHG3-201ENST00000413987 Q6ZSN1 163 aa6.74□□□□□ -1.33
SNHG3-201ENST00000413987 LINC00526Q96FQ7 95 aa6.74□□□□□ -1.33
SNHG3-201ENST00000413987 CHCHD5Q9BSY4 110 aa6.74□□□□□ -1.33
SNHG3-201ENST00000413987 IGHV1OR15-1A0A075B7D0 117 aa6.74□□□□□ -1.33
SNHG3-201ENST00000413987 IGLV5-52A0A0A0MRZ9 124 aa6.74□□□□□ -1.33
SNHG3-201ENST00000413987 POLR2KP53803 58 aaKnown RBP6.74□□□□□ -1.33
SNHG3-201ENST00000413987 KIAA0087Q14695 138 aa6.74□□□□□ -1.33
SNHG3-201ENST00000413987 C18orf65Q6ZTR6 163 aa6.74□□□□□ -1.33
SNHG3-201ENST00000413987 ZNF706Q9Y5V0 76 aaPredicted RBP6.74□□□□□ -1.33
SNHG3-201ENST00000413987 WNK1Q9H4A3 2382 aa6.74□□□□□ -1.33
SNHG3-201ENST00000413987 TRAV13-1A0A0B4J241 112 aa6.73□□□□□ -1.33
SNHG3-201ENST00000413987 H7C423 109 aa6.73□□□□□ -1.33
SNHG3-201ENST00000413987 K7EQD1 137 aa6.73□□□□□ -1.33
SNHG3-201ENST00000413987 KLK9Q2XQG4 91 aa6.73□□□□□ -1.33
SNHG3-201ENST00000413987 KLK9Q9UKQ9 250 aa6.73□□□□□ -1.33
SNHG3-201ENST00000413987 IGHV3-74A0A0B4J1X5 117 aa6.73□□□□□ -1.33
SNHG3-201ENST00000413987 IGHV3-38A0A0C4DH36 116 aa6.73□□□□□ -1.33
SNHG3-201ENST00000413987 SYNJ2BPP57105 145 aa6.73□□□□□ -1.33
SNHG3-201ENST00000413987 ICOSQ9Y6W8 199 aa6.73□□□□□ -1.33
SNHG3-201ENST00000413987 IGHV3-49A0A0A0MS15 119 aa6.72□□□□□ -1.33
SNHG3-201ENST00000413987 K7EQG2 157 aa6.72□□□□□ -1.33
SNHG3-201ENST00000413987 M0R378 163 aa6.72□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms