RNA–Protein interactions for RNA: ENST00000411819.1

MSH6-202, Transcript of mutS homolog 6, humanhuman

TSL 4

Gene MSH6, Length 548 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-202ENST00000411819 ORAOV1Q8WV07 137 aa13.87□□□□□ -0.19
MSH6-202ENST00000411819 TNXBP22105 4242 aa13.87□□□□□ -0.19
MSH6-202ENST00000411819 SPINK6Q6UWN8 80 aa13.86□□□□□ -0.19
MSH6-202ENST00000411819 ORMDL3Q8N138 153 aa13.86□□□□□ -0.19
MSH6-202ENST00000411819 OR10D4PQ8NGN7 298 aa13.86□□□□□ -0.19
MSH6-202ENST00000411819 LINC01600Q96MT4 127 aa13.86□□□□□ -0.19
MSH6-202ENST00000411819 A0A0J9YXV3 536 aa13.85□□□□□ -0.19
MSH6-202ENST00000411819 A0A1W2PNN7 141 aa13.85□□□□□ -0.19
MSH6-202ENST00000411819 ATP5L2Q7Z4Y8 100 aa13.85□□□□□ -0.19
MSH6-202ENST00000411819 FAM104AQ969W3 186 aa13.85□□□□□ -0.19
MSH6-202ENST00000411819 RAB5AP20339 215 aa13.84□□□□□ -0.19
MSH6-202ENST00000411819 MRPS36P82909 103 aaKnown RBP13.84□□□□□ -0.19
MSH6-202ENST00000411819 C9orf116Q5BN46 136 aaPredicted RBP13.84□□□□□ -0.19
MSH6-202ENST00000411819 REG3GQ6UW15 175 aa13.84□□□□□ -0.19
MSH6-202ENST00000411819 TMEM136Q6ZRR5 245 aa13.84□□□□□ -0.19
MSH6-202ENST00000411819 PRELID3AQ96N28 172 aa13.84□□□□□ -0.19
MSH6-202ENST00000411819 IFI27P40305 119 aaPredicted RBP13.83□□□□□ -0.2
MSH6-202ENST00000411819 IGHV3OR16-9A0A0B4J2B5 98 aa13.82□□□□□ -0.2
MSH6-202ENST00000411819 TGIF2-C20orf24A0A0A6YYL0 155 aa13.8□□□□□ -0.2
MSH6-202ENST00000411819 NDUFA1O15239 70 aa13.8□□□□□ -0.2
MSH6-202ENST00000411819 RNF151Q2KHN1 245 aa13.8□□□□□ -0.2
MSH6-202ENST00000411819 MRPL35Q9NZE8 188 aaKnown RBP13.8□□□□□ -0.2
MSH6-202ENST00000411819 LOC389332A0A1B0GUA5 103 aa13.78□□□□□ -0.2
MSH6-202ENST00000411819 MT-ND6P03923 174 aa13.78□□□□□ -0.2
MSH6-202ENST00000411819 SRSF9Q13242 221 aaKnown RBP eCLIP13.78□□□□□ -0.2
MSH6-202ENST00000411819 ODF1Q14990 250 aa13.78□□□□□ -0.2
MSH6-202ENST00000411819 PHF5AQ7RTV0 110 aaKnown RBP13.78□□□□□ -0.2
MSH6-202ENST00000411819 IMMP2LQ96T52 175 aa13.78□□□□□ -0.2
MSH6-202ENST00000411819 F8WDY8 70 aa13.77□□□□□ -0.21
MSH6-202ENST00000411819 MAP1LC3AQ9H492 121 aa13.77□□□□□ -0.21
MSH6-202ENST00000411819 PSORS1C2Q9UIG4 136 aa13.77□□□□□ -0.21
MSH6-202ENST00000411819 IGLV4-3A0A075B6K6 122 aa13.76□□□□□ -0.21
MSH6-202ENST00000411819 PNRC1Q12796 327 aaPredicted RBP13.76□□□□□ -0.21
MSH6-202ENST00000411819 C10orf25Q5T742 122 aa13.76□□□□□ -0.21
MSH6-202ENST00000411819 TMEM141Q96I45 108 aa13.76□□□□□ -0.21
MSH6-202ENST00000411819 PYGO1Q9Y3Y4 419 aa13.76□□□□□ -0.21
MSH6-202ENST00000411819 UNQ6190/PRO20217Q6UXQ8 127 aa13.75□□□□□ -0.21
MSH6-202ENST00000411819 LAMTOR2Q9Y2Q5 125 aa13.75□□□□□ -0.21
MSH6-202ENST00000411819 MT-ND4LP03901 98 aa13.74□□□□□ -0.21
MSH6-202ENST00000411819 C1orf137Q5JT78 98 aa13.74□□□□□ -0.21
MSH6-202ENST00000411819 ANAPC16Q96DE5 110 aa13.74□□□□□ -0.21
MSH6-202ENST00000411819 C6orf48Q9UBA6 75 aa13.74□□□□□ -0.21
MSH6-202ENST00000411819 A0A087WZ39 114 aa13.73□□□□□ -0.21
MSH6-202ENST00000411819 RAB14P61106 215 aa13.73□□□□□ -0.21
MSH6-202ENST00000411819 LINC00242Q5T6M2 205 aa13.73□□□□□ -0.21
MSH6-202ENST00000411819 TEX43Q6ZNM6 134 aa13.73□□□□□ -0.21
MSH6-202ENST00000411819 GAGE2EQ4V326 116 aa13.72□□□□□ -0.21
MSH6-202ENST00000411819 C2orf88Q9BSF0 95 aa13.72□□□□□ -0.21
MSH6-202ENST00000411819 GAGE2DQ9UEU5 116 aa13.72□□□□□ -0.21
MSH6-202ENST00000411819 CYSLTR1Q9Y271 337 aa13.72□□□□□ -0.21
MSH6-202ENST00000411819 FAM168BA1KXE4 195 aa13.71□□□□□ -0.21
MSH6-202ENST00000411819 PRSS47A8MTI9 375 aa13.71□□□□□ -0.21
MSH6-202ENST00000411819 C2orf66Q6UXQ4 117 aa13.71□□□□□ -0.21
MSH6-202ENST00000411819 Q6ZN92 141 aa13.71□□□□□ -0.21
MSH6-202ENST00000411819 FAM19A5Q7Z5A7 132 aaPredicted RBP13.71□□□□□ -0.21
MSH6-202ENST00000411819 TLX1NBP0CAT3 122 aa13.7□□□□□ -0.22
MSH6-202ENST00000411819 KRTAP10-8P60410 259 aa13.7□□□□□ -0.22
MSH6-202ENST00000411819 Q8N8P6 123 aa13.7□□□□□ -0.22
MSH6-202ENST00000411819 UBE2D1P51668 147 aa13.68□□□□□ -0.22
MSH6-202ENST00000411819 KIAA0087Q14695 138 aa13.68□□□□□ -0.22
MSH6-202ENST00000411819 ORMDL2Q53FV1 153 aa13.68□□□□□ -0.22
MSH6-202ENST00000411819 ZC2HC1BQ5TFG8 222 aa13.68□□□□□ -0.22
MSH6-202ENST00000411819 C2orf82Q6UX34 121 aa13.67□□□□□ -0.22
MSH6-202ENST00000411819 LRP2P98164 4655 aa13.67□□□□□ -0.22
MSH6-202ENST00000411819 TRBV30A0A0K0K1B3 111 aa13.66□□□□□ -0.22
MSH6-202ENST00000411819 PACRGQ96M98 296 aaPredicted RBP13.66□□□□□ -0.22
MSH6-202ENST00000411819 VCX2Q9H322 139 aa13.66□□□□□ -0.22
MSH6-202ENST00000411819 LINC00173Q6ZV60 143 aa13.65□□□□□ -0.22
MSH6-202ENST00000411819 CTDSP1Q9GZU7 261 aa13.65□□□□□ -0.22
MSH6-202ENST00000411819 IGLV7-43P04211 117 aa13.64□□□□□ -0.23
MSH6-202ENST00000411819 TOMM7Q9P0U1 55 aa13.64□□□□□ -0.23
MSH6-202ENST00000411819 M0QXV9 152 aa13.63□□□□□ -0.23
MSH6-202ENST00000411819 PRSS2P07478 247 aa13.63□□□□□ -0.23
MSH6-202ENST00000411819 LINC01561Q8N1V8 128 aa13.63□□□□□ -0.23
MSH6-202ENST00000411819 AMELXQ99217 191 aa13.63□□□□□ -0.23
MSH6-202ENST00000411819 NXT2Q9NPJ8 142 aaKnown RBP13.63□□□□□ -0.23
MSH6-202ENST00000411819 NDUFC2-KCTD14E9PQ53 114 aa13.62□□□□□ -0.23
MSH6-202ENST00000411819 K7EMI3 77 aa13.62□□□□□ -0.23
MSH6-202ENST00000411819 UBE2BP63146 152 aa13.62□□□□□ -0.23
MSH6-202ENST00000411819 KRTAP11-1Q8IUC1 163 aa13.62□□□□□ -0.23
MSH6-202ENST00000411819 DIRC1Q969H9 104 aa13.61□□□□□ -0.23
MSH6-202ENST00000411819 NPSP0C0P6 89 aa13.6□□□□□ -0.23
MSH6-202ENST00000411819 CKS1BP61024 79 aa13.6□□□□□ -0.23
MSH6-202ENST00000411819 IGIPA6NJ69 53 aa13.59□□□□□ -0.23
MSH6-202ENST00000411819 KRTAP7-1Q8IUC3 87 aa13.59□□□□□ -0.23
MSH6-202ENST00000411819 KIAA1644Q3SXP7 199 aa13.58□□□□□ -0.24
MSH6-202ENST00000411819 CLLU1Q5K131 121 aa13.58□□□□□ -0.24
MSH6-202ENST00000411819 PAPPA-AS1Q5QFB9 102 aa13.58□□□□□ -0.24
MSH6-202ENST00000411819 C9orf129Q5T035 196 aaKnown RBP13.58□□□□□ -0.24
MSH6-202ENST00000411819 HERVK_113P63121 156 aa13.57□□□□□ -0.24
MSH6-202ENST00000411819 C6orf226Q5I0X4 101 aa13.57□□□□□ -0.24
MSH6-202ENST00000411819 H0Y9J4 135 aa13.56□□□□□ -0.24
MSH6-202ENST00000411819 G0S2P27469 103 aa13.56□□□□□ -0.24
MSH6-202ENST00000411819 SEC11AP67812 179 aa13.56□□□□□ -0.24
MSH6-202ENST00000411819 FAM19A3Q7Z5A8 133 aa13.56□□□□□ -0.24
MSH6-202ENST00000411819 Q8IZM0 81 aa13.56□□□□□ -0.24
MSH6-202ENST00000411819 ALKBH7Q9BT30 221 aaPredicted RBP13.56□□□□□ -0.24
MSH6-202ENST00000411819 GEMIN7Q9H840 131 aaKnown RBP13.56□□□□□ -0.24
MSH6-202ENST00000411819 ADCYAP1P18509 176 aa13.55□□□□□ -0.24
MSH6-202ENST00000411819 TOMM6Q96B49 74 aa13.55□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 68.2 ms