RNA–Protein interactions for RNA: ENST00000410828.1

RNU4-53P-201, Transcript of RNA, U4 small nuclear 53, pseudogene, humanhuman

BASIC

Gene RNU4-53P, Length 140 nt, Biotype snRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-53P-201ENST00000410828 TMEM18Q96B42 140 aa1.35□□□□□ -2.19
RNU4-53P-201ENST00000410828 SMIM12Q96EX1 92 aa1.35□□□□□ -2.19
RNU4-53P-201ENST00000410828 KIR2DL4Q99706 377 aa1.35□□□□□ -2.19
RNU4-53P-201ENST00000410828 KRTAP4-1Q9BYQ7 146 aa1.35□□□□□ -2.19
RNU4-53P-201ENST00000410828 RNASE7Q9H1E1 156 aaKnown RBP1.35□□□□□ -2.19
RNU4-53P-201ENST00000410828 UBE2D4Q9Y2X8 147 aa1.35□□□□□ -2.19
RNU4-53P-201ENST00000410828 C22orf24Q9Y442 160 aa1.35□□□□□ -2.19
RNU4-53P-201ENST00000410828 FXYD6-FXYD2A0A087WZ82 144 aa1.34□□□□□ -2.19
RNU4-53P-201ENST00000410828 TGIF2-C20orf24A0A0A6YYL0 155 aa1.34□□□□□ -2.19
RNU4-53P-201ENST00000410828 A0A1B0GV50 99 aa1.34□□□□□ -2.19
RNU4-53P-201ENST00000410828 ZNF727A8MUV8 499 aa1.34□□□□□ -2.19
RNU4-53P-201ENST00000410828 UMAD1C9J7I0 102 aa1.34□□□□□ -2.19
RNU4-53P-201ENST00000410828 UPK1BO75841 260 aa1.34□□□□□ -2.19
RNU4-53P-201ENST00000410828 PPP1R17O96001 155 aa1.34□□□□□ -2.19
RNU4-53P-201ENST00000410828 H2AFB1P0C5Y9 115 aa1.34□□□□□ -2.19
RNU4-53P-201ENST00000410828 LORP23490 312 aaPredicted RBP1.34□□□□□ -2.19
RNU4-53P-201ENST00000410828 GNG4P50150 75 aa1.34□□□□□ -2.19
RNU4-53P-201ENST00000410828 KIAA0087Q14695 138 aa1.34□□□□□ -2.19
RNU4-53P-201ENST00000410828 C2orf82Q6UX34 121 aa1.34□□□□□ -2.19
RNU4-53P-201ENST00000410828 LINC00299Q6ZSB3 139 aa1.34□□□□□ -2.19
RNU4-53P-201ENST00000410828 Q6ZUT4 128 aa1.34□□□□□ -2.19
RNU4-53P-201ENST00000410828 MRPL55Q7Z7F7 128 aaKnown RBP1.34□□□□□ -2.19
RNU4-53P-201ENST00000410828 DAND5Q8N907 189 aa1.34□□□□□ -2.19
RNU4-53P-201ENST00000410828 NUDT10Q8NFP7 164 aa1.34□□□□□ -2.19
RNU4-53P-201ENST00000410828 FAM213BQ8TBF2 198 aa1.34□□□□□ -2.19
RNU4-53P-201ENST00000410828 NUDT11Q96G61 164 aa1.34□□□□□ -2.19
RNU4-53P-201ENST00000410828 TIMM21Q9BVV7 248 aa1.34□□□□□ -2.19
RNU4-53P-201ENST00000410828 XAGE1AQ9HD64 81 aa1.34□□□□□ -2.19
RNU4-53P-201ENST00000410828 MED9Q9NWA0 146 aa1.34□□□□□ -2.19
RNU4-53P-201ENST00000410828 TP73-AS1Q9UF72 201 aa1.34□□□□□ -2.19
RNU4-53P-201ENST00000410828 TRBV20OR9-2A0A075B6H5 130 aa1.33□□□□□ -2.2
RNU4-53P-201ENST00000410828 RPL37AP8A6NKH3 93 aa1.33□□□□□ -2.2
RNU4-53P-201ENST00000410828 IFITM10A6NMD0 228 aa1.33□□□□□ -2.2
RNU4-53P-201ENST00000410828 M0R2T5 61 aa1.33□□□□□ -2.2
RNU4-53P-201ENST00000410828 TCAPO15273 167 aa1.33□□□□□ -2.2
RNU4-53P-201ENST00000410828 ARPC5O15511 151 aa1.33□□□□□ -2.2
RNU4-53P-201ENST00000410828 PDE6DO43924 150 aa1.33□□□□□ -2.2
RNU4-53P-201ENST00000410828 TNFRSF6BO95407 300 aa1.33□□□□□ -2.2
RNU4-53P-201ENST00000410828 PRSS2P07478 247 aa1.33□□□□□ -2.2
RNU4-53P-201ENST00000410828 GIPP09681 153 aaPredicted RBP1.33□□□□□ -2.2
RNU4-53P-201ENST00000410828 RAB4AP20338 218 aa1.33□□□□□ -2.2
RNU4-53P-201ENST00000410828 KRTAP10-6P60371 365 aaPredicted RBP1.33□□□□□ -2.2
RNU4-53P-201ENST00000410828 CKS1BP61024 79 aa1.33□□□□□ -2.2
RNU4-53P-201ENST00000410828 SUMO2P61956 95 aaKnown RBP1.33□□□□□ -2.2
RNU4-53P-201ENST00000410828 RPL32P62910 135 aaKnown RBP1.33□□□□□ -2.2
RNU4-53P-201ENST00000410828 HBBP68871 147 aa1.33□□□□□ -2.2
RNU4-53P-201ENST00000410828 MRPS36P82909 103 aaKnown RBP1.33□□□□□ -2.2
RNU4-53P-201ENST00000410828 IFITM3Q01628 133 aa1.33□□□□□ -2.2
RNU4-53P-201ENST00000410828 Q5BKY6 102 aa1.33□□□□□ -2.2
RNU4-53P-201ENST00000410828 LINC00469Q8N7U9 141 aa1.33□□□□□ -2.2
RNU4-53P-201ENST00000410828 BORCS7Q96B45 105 aa1.33□□□□□ -2.2
RNU4-53P-201ENST00000410828 LINC00167Q96N53 147 aa1.33□□□□□ -2.2
RNU4-53P-201ENST00000410828 TMEM191AQ9H0A3 160 aa1.33□□□□□ -2.2
RNU4-53P-201ENST00000410828 MANBALQ9NQG1 85 aa1.33□□□□□ -2.2
RNU4-53P-201ENST00000410828 SPANXA1Q9NS26 97 aa1.33□□□□□ -2.2
RNU4-53P-201ENST00000410828 NDUFA13Q9P0J0 144 aa1.33□□□□□ -2.2
RNU4-53P-201ENST00000410828 GNG13Q9P2W3 67 aa1.33□□□□□ -2.2
RNU4-53P-201ENST00000410828 NDUFA12Q9UI09 145 aa1.33□□□□□ -2.2
RNU4-53P-201ENST00000410828 SSPOA2VEC9 5147 aa1.32□□□□□ -2.2
RNU4-53P-201ENST00000410828 A0A1B0GUT8 65 aa1.32□□□□□ -2.2
RNU4-53P-201ENST00000410828 GAGE10A6NGK3 116 aa1.32□□□□□ -2.2
RNU4-53P-201ENST00000410828 A8MWL6 223 aa1.32□□□□□ -2.2
RNU4-53P-201ENST00000410828 TEX46H3BTG2 121 aa1.32□□□□□ -2.2
RNU4-53P-201ENST00000410828 PPP1R2P9O14990 202 aa1.32□□□□□ -2.2
RNU4-53P-201ENST00000410828 GATCO43716 136 aaKnown RBP1.32□□□□□ -2.2
RNU4-53P-201ENST00000410828 SPINK1P00995 79 aa1.32□□□□□ -2.2
RNU4-53P-201ENST00000410828 IFI27P40305 119 aaPredicted RBP1.32□□□□□ -2.2
RNU4-53P-201ENST00000410828 RPL39P62891 51 aaKnown RBP1.32□□□□□ -2.2
RNU4-53P-201ENST00000410828 PNRC1Q12796 327 aaPredicted RBP1.32□□□□□ -2.2
RNU4-53P-201ENST00000410828 KRTAP19-2Q3LHN2 52 aa1.32□□□□□ -2.2
RNU4-53P-201ENST00000410828 C6orf226Q5I0X4 101 aa1.32□□□□□ -2.2
RNU4-53P-201ENST00000410828 XP32Q5T750 250 aa1.32□□□□□ -2.2
RNU4-53P-201ENST00000410828 Q6ZN92 141 aa1.32□□□□□ -2.2
RNU4-53P-201ENST00000410828 KRTAP13-1Q8IUC0 172 aa1.32□□□□□ -2.2
RNU4-53P-201ENST00000410828 AMN1Q8IY45 258 aa1.32□□□□□ -2.2
RNU4-53P-201ENST00000410828 LINC01561Q8N1V8 128 aa1.32□□□□□ -2.2
RNU4-53P-201ENST00000410828 FAM19A2Q8N3H0 131 aa1.32□□□□□ -2.2
RNU4-53P-201ENST00000410828 C3orf22Q8N5N4 141 aa1.32□□□□□ -2.2
RNU4-53P-201ENST00000410828 OCC1Q8TAD7 63 aa1.32□□□□□ -2.2
RNU4-53P-201ENST00000410828 FAM104AQ969W3 186 aa1.32□□□□□ -2.2
RNU4-53P-201ENST00000410828 PLEKHB2Q96CS7 222 aa1.32□□□□□ -2.2
RNU4-53P-201ENST00000410828 C20orf78Q9BR46 151 aa1.32□□□□□ -2.2
RNU4-53P-201ENST00000410828 ALKBH7Q9BT30 221 aaPredicted RBP1.32□□□□□ -2.2
RNU4-53P-201ENST00000410828 TOMM7Q9P0U1 55 aa1.32□□□□□ -2.2
RNU4-53P-201ENST00000410828 MACF1Q9UPN3 7388 aaKnown RBP1.32□□□□□ -2.2
RNU4-53P-201ENST00000410828 USH2AO75445 5202 aa1.32□□□□□ -2.2
RNU4-53P-201ENST00000410828 SYNE2Q8WXH0 6885 aaKnown RBP1.31□□□□□ -2.2
RNU4-53P-201ENST00000410828 IGLV8-61A0A075B6I0 122 aa1.31□□□□□ -2.2
RNU4-53P-201ENST00000410828 IGLV5-37A0A075B6J1 123 aa1.31□□□□□ -2.2
RNU4-53P-201ENST00000410828 IGKV2-28A0A075B6P5 120 aa1.31□□□□□ -2.2
RNU4-53P-201ENST00000410828 LINC00862A6NCI5 91 aa1.31□□□□□ -2.2
RNU4-53P-201ENST00000410828 HIGD1CA8MV81 97 aa1.31□□□□□ -2.2
RNU4-53P-201ENST00000410828 F8VRH5 84 aa1.31□□□□□ -2.2
RNU4-53P-201ENST00000410828 SMKR1H3BMG3 65 aa1.31□□□□□ -2.2
RNU4-53P-201ENST00000410828 K7EN84 100 aa1.31□□□□□ -2.2
RNU4-53P-201ENST00000410828 IGKV2D-28P01615 120 aa1.31□□□□□ -2.2
RNU4-53P-201ENST00000410828 RAB5AP20339 215 aa1.31□□□□□ -2.2
RNU4-53P-201ENST00000410828 TAGLN2P37802 199 aaKnown RBP1.31□□□□□ -2.2
RNU4-53P-201ENST00000410828 CXCL5P42830 114 aa1.31□□□□□ -2.2
RNU4-53P-201ENST00000410828 PRLHP81277 87 aa1.31□□□□□ -2.2
Retrieved 100 of 20,778 RNA–protein pairs in 143.7 ms