RNA–Protein interactions for RNA: ENST00000409909.7

LSM5-204, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2 BASIC

Gene LSM5, Length 740 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-204ENST00000409909 Q8N8P6 123 aa11.11□□□□□ -0.63
LSM5-204ENST00000409909 IMMP2LQ96T52 175 aa11.11□□□□□ -0.63
LSM5-204ENST00000409909 MAP1LC3AQ9H492 121 aa11.11□□□□□ -0.63
LSM5-204ENST00000409909 LINC00474Q9P2X8 69 aa11.11□□□□□ -0.63
LSM5-204ENST00000409909 PYGO1Q9Y3Y4 419 aa11.11□□□□□ -0.63
LSM5-204ENST00000409909 IGLV4-3A0A075B6K6 122 aa11.1□□□□□ -0.63
LSM5-204ENST00000409909 C7orf33Q8WU49 177 aa11.1□□□□□ -0.63
LSM5-204ENST00000409909 C2orf48Q96LS8 159 aa11.1□□□□□ -0.63
LSM5-204ENST00000409909 CAMK2N2Q96S95 79 aa11.1□□□□□ -0.63
LSM5-204ENST00000409909 APOMO95445 188 aa11.09□□□□□ -0.63
LSM5-204ENST00000409909 IFI27P40305 119 aaPredicted RBP11.09□□□□□ -0.63
LSM5-204ENST00000409909 PTTG1IPP53801 180 aa11.09□□□□□ -0.63
LSM5-204ENST00000409909 PKIGQ9Y2B9 76 aa11.09□□□□□ -0.63
LSM5-204ENST00000409909 LOC107984640A0A0U1RRK4 108 aa11.08□□□□□ -0.64
LSM5-204ENST00000409909 SPAG11BQ08648 103 aa11.08□□□□□ -0.64
LSM5-204ENST00000409909 OR10D4PQ8NGN7 298 aa11.08□□□□□ -0.64
LSM5-204ENST00000409909 GAGE2BQ13066 116 aa11.07□□□□□ -0.64
LSM5-204ENST00000409909 LINC00242Q5T6M2 205 aa11.07□□□□□ -0.64
LSM5-204ENST00000409909 ORAOV1Q8WV07 137 aa11.07□□□□□ -0.64
LSM5-204ENST00000409909 CTDSP1Q9GZU7 261 aa11.07□□□□□ -0.64
LSM5-204ENST00000409909 A0A0J9YXV3 536 aa11.06□□□□□ -0.64
LSM5-204ENST00000409909 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP11.06□□□□□ -0.64
LSM5-204ENST00000409909 C2orf66Q6UXQ4 117 aa11.06□□□□□ -0.64
LSM5-204ENST00000409909 TMEM141Q96I45 108 aa11.06□□□□□ -0.64
LSM5-204ENST00000409909 SEC11CQ9BY50 192 aa11.06□□□□□ -0.64
LSM5-204ENST00000409909 PRR3P79522 188 aaKnown RBP11.05□□□□□ -0.64
LSM5-204ENST00000409909 KIAA1644Q3SXP7 199 aa11.05□□□□□ -0.64
LSM5-204ENST00000409909 ZC2HC1BQ5TFG8 222 aa11.05□□□□□ -0.64
LSM5-204ENST00000409909 CYSLTR1Q9Y271 337 aa11.05□□□□□ -0.64
LSM5-204ENST00000409909 HMCN2Q8NDA2 5059 aa11.05□□□□□ -0.64
LSM5-204ENST00000409909 A0A1W2PNN7 141 aa11.04□□□□□ -0.64
LSM5-204ENST00000409909 RNF151Q2KHN1 245 aa11.04□□□□□ -0.64
LSM5-204ENST00000409909 ORMDL2Q53FV1 153 aa11.04□□□□□ -0.64
LSM5-204ENST00000409909 C10orf25Q5T742 122 aa11.04□□□□□ -0.64
LSM5-204ENST00000409909 LINC00173Q6ZV60 143 aa11.04□□□□□ -0.64
LSM5-204ENST00000409909 COMMD7Q86VX2 200 aa11.04□□□□□ -0.64
LSM5-204ENST00000409909 TRAV9-1A0A075B6T8 112 aa11.03□□□□□ -0.64
LSM5-204ENST00000409909 A0A087WZ39 114 aa11.03□□□□□ -0.64
LSM5-204ENST00000409909 TGIF2-C20orf24A0A0A6YYL0 155 aa11.03□□□□□ -0.64
LSM5-204ENST00000409909 IGIPA6NJ69 53 aa11.03□□□□□ -0.64
LSM5-204ENST00000409909 UBE2D1P51668 147 aa11.03□□□□□ -0.64
LSM5-204ENST00000409909 TEX43Q6ZNM6 134 aa11.03□□□□□ -0.64
LSM5-204ENST00000409909 NXT2Q9NPJ8 142 aaKnown RBP11.03□□□□□ -0.64
LSM5-204ENST00000409909 K7EMI3 77 aa11.02□□□□□ -0.65
LSM5-204ENST00000409909 MT1HL1P0DM35 61 aa11.02□□□□□ -0.65
LSM5-204ENST00000409909 KIAA0087Q14695 138 aa11.02□□□□□ -0.65
LSM5-204ENST00000409909 UNQ6190/PRO20217Q6UXQ8 127 aa11.02□□□□□ -0.65
LSM5-204ENST00000409909 AMELXQ99217 191 aa11.02□□□□□ -0.65
LSM5-204ENST00000409909 MRPL35Q9NZE8 188 aaKnown RBP11.02□□□□□ -0.65
LSM5-204ENST00000409909 F8WDY8 70 aa11.01□□□□□ -0.65
LSM5-204ENST00000409909 RPL18AQ02543 176 aaKnown RBP11.01□□□□□ -0.65
LSM5-204ENST00000409909 C10orf91Q5T1B1 145 aa11.01□□□□□ -0.65
LSM5-204ENST00000409909 NDUFA1O15239 70 aa11□□□□□ -0.65
LSM5-204ENST00000409909 VCX2Q9H322 139 aa11□□□□□ -0.65
LSM5-204ENST00000409909 NPSP0C0P6 89 aa10.99□□□□□ -0.65
LSM5-204ENST00000409909 C9orf116Q5BN46 136 aaPredicted RBP10.99□□□□□ -0.65
LSM5-204ENST00000409909 Q6ZN92 141 aa10.99□□□□□ -0.65
LSM5-204ENST00000409909 C2orf88Q9BSF0 95 aa10.99□□□□□ -0.65
LSM5-204ENST00000409909 GNB1LQ9BYB4 327 aa10.99□□□□□ -0.65
LSM5-204ENST00000409909 C6orf48Q9UBA6 75 aa10.99□□□□□ -0.65
LSM5-204ENST00000409909 S100PP25815 95 aa10.98□□□□□ -0.65
LSM5-204ENST00000409909 TNXBP22105 4242 aa10.98□□□□□ -0.65
LSM5-204ENST00000409909 SERTAD4-AS1Q5TG53 156 aa10.97□□□□□ -0.65
LSM5-204ENST00000409909 Q6ZRP5 223 aa10.97□□□□□ -0.65
LSM5-204ENST00000409909 TOMM6Q96B49 74 aa10.97□□□□□ -0.65
LSM5-204ENST00000409909 ALKBH7Q9BT30 221 aaPredicted RBP10.97□□□□□ -0.65
LSM5-204ENST00000409909 TLX1NBP0CAT3 122 aa10.96□□□□□ -0.65
LSM5-204ENST00000409909 C2orf82Q6UX34 121 aa10.96□□□□□ -0.65
LSM5-204ENST00000409909 FAM19A3Q7Z5A8 133 aa10.96□□□□□ -0.65
LSM5-204ENST00000409909 LINC01561Q8N1V8 128 aa10.96□□□□□ -0.65
LSM5-204ENST00000409909 CARHSP1Q9Y2V2 147 aaKnown RBP10.96□□□□□ -0.65
LSM5-204ENST00000409909 SRSF9Q13242 221 aaKnown RBP eCLIP10.95□□□□□ -0.66
LSM5-204ENST00000409909 TIMM17AQ99595 171 aa10.95□□□□□ -0.66
LSM5-204ENST00000409909 LINC01546A6NGU7 62 aa10.94□□□□□ -0.66
LSM5-204ENST00000409909 G0S2P27469 103 aa10.94□□□□□ -0.66
LSM5-204ENST00000409909 PHF5AQ7RTV0 110 aaKnown RBP10.94□□□□□ -0.66
LSM5-204ENST00000409909 RPS10P5Q9NQ39 176 aa10.94□□□□□ -0.66
LSM5-204ENST00000409909 FAM168BA1KXE4 195 aa10.93□□□□□ -0.66
LSM5-204ENST00000409909 RHEBQ15382 184 aa10.93□□□□□ -0.66
LSM5-204ENST00000409909 ERASQ7Z444 233 aa10.93□□□□□ -0.66
LSM5-204ENST00000409909 GAGE2EQ4V326 116 aa10.92□□□□□ -0.66
LSM5-204ENST00000409909 PAPPA-AS1Q5QFB9 102 aa10.92□□□□□ -0.66
LSM5-204ENST00000409909 SPINK6Q6UWN8 80 aa10.92□□□□□ -0.66
LSM5-204ENST00000409909 SCGB3A1Q96QR1 104 aa10.92□□□□□ -0.66
LSM5-204ENST00000409909 MRPL18Q9H0U6 180 aaKnown RBP10.92□□□□□ -0.66
LSM5-204ENST00000409909 GAGE2DQ9UEU5 116 aa10.92□□□□□ -0.66
LSM5-204ENST00000409909 CDKN2A-AS1Q9UH64 79 aa10.92□□□□□ -0.66
LSM5-204ENST00000409909 TRBV30A0A0K0K1B3 111 aa10.91□□□□□ -0.66
LSM5-204ENST00000409909 FABP9Q0Z7S8 132 aa10.91□□□□□ -0.66
LSM5-204ENST00000409909 COX19Q49B96 90 aa10.91□□□□□ -0.66
LSM5-204ENST00000409909 KRTAP7-1Q8IUC3 87 aa10.91□□□□□ -0.66
LSM5-204ENST00000409909 LINC01600Q96MT4 127 aa10.91□□□□□ -0.66
LSM5-204ENST00000409909 PSORS1C2Q9UIG4 136 aa10.91□□□□□ -0.66
LSM5-204ENST00000409909 MT-ND6P03923 174 aa10.9□□□□□ -0.66
LSM5-204ENST00000409909 HERVK_113P63121 156 aa10.9□□□□□ -0.66
LSM5-204ENST00000409909 SEC11AP67812 179 aa10.89□□□□□ -0.67
LSM5-204ENST00000409909 TOMM7Q9P0U1 55 aa10.89□□□□□ -0.67
LSM5-204ENST00000409909 NDUFC2-KCTD14E9PQ53 114 aa10.88□□□□□ -0.67
LSM5-204ENST00000409909 PRSS2P07478 247 aa10.88□□□□□ -0.67
LSM5-204ENST00000409909 KRTAP11-1Q8IUC1 163 aa10.88□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 8.7 ms