RNA–Protein interactions for RNA: ENST00000409783.6

PTCD3-203, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 5

Gene PTCD3, Length 587 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-203ENST00000409783 LINC00614P0C842 121 aa14.45□□□□□ -0.1
PTCD3-203ENST00000409783 UBE2D1P51668 147 aa14.45□□□□□ -0.1
PTCD3-203ENST00000409783 LINC00242Q5T6M2 205 aa14.45□□□□□ -0.1
PTCD3-203ENST00000409783 C5orf38Q86SI9 138 aa14.45□□□□□ -0.1
PTCD3-203ENST00000409783 SCGB3A1Q96QR1 104 aa14.44□□□□□ -0.1
PTCD3-203ENST00000409783 VCX2Q9H322 139 aa14.44□□□□□ -0.1
PTCD3-203ENST00000409783 LINC01549A6NIU2 74 aa14.43□□□□□ -0.1
PTCD3-203ENST00000409783 SCO1O75880 301 aa14.43□□□□□ -0.1
PTCD3-203ENST00000409783 TRGC2P03986 189 aa14.43□□□□□ -0.1
PTCD3-203ENST00000409783 Q6ZN92 141 aa14.43□□□□□ -0.1
PTCD3-203ENST00000409783 COX6A2Q02221 97 aa14.42□□□□□ -0.1
PTCD3-203ENST00000409783 MALP21145 153 aa14.41□□□□□ -0.1
PTCD3-203ENST00000409783 FAM19A3Q7Z5A8 133 aa14.41□□□□□ -0.1
PTCD3-203ENST00000409783 LINC00526Q96FQ7 95 aa14.41□□□□□ -0.1
PTCD3-203ENST00000409783 C2orf88Q9BSF0 95 aa14.41□□□□□ -0.1
PTCD3-203ENST00000409783 HAMPP81172 84 aa14.4□□□□□ -0.1
PTCD3-203ENST00000409783 PAPPA-AS1Q5QFB9 102 aa14.4□□□□□ -0.1
PTCD3-203ENST00000409783 SDIM1Q6ZPB5 146 aa14.4□□□□□ -0.1
PTCD3-203ENST00000409783 TRAV16A0A0A6YYK6 109 aaPredicted RBP14.39□□□□□ -0.11
PTCD3-203ENST00000409783 RAB5BP61020 215 aa14.39□□□□□ -0.11
PTCD3-203ENST00000409783 A0A087WZ39 114 aa14.37□□□□□ -0.11
PTCD3-203ENST00000409783 PMCHL1Q16048 86 aa14.37□□□□□ -0.11
PTCD3-203ENST00000409783 IGHV3-64A0A075B6Q5 118 aa14.36□□□□□ -0.11
PTCD3-203ENST00000409783 APOMO95445 188 aa14.36□□□□□ -0.11
PTCD3-203ENST00000409783 HBDP02042 147 aa14.36□□□□□ -0.11
PTCD3-203ENST00000409783 PDZD11Q5EBL8 140 aa14.36□□□□□ -0.11
PTCD3-203ENST00000409783 IGLV4-69A0A075B6H9 119 aa14.35□□□□□ -0.11
PTCD3-203ENST00000409783 ZNF561-AS1K7EIQ3 104 aa14.35□□□□□ -0.11
PTCD3-203ENST00000409783 CHCHD1Q96BP2 118 aaKnown RBP14.35□□□□□ -0.11
PTCD3-203ENST00000409783 FAT1Q14517 4588 aa14.34□□□□□ -0.11
PTCD3-203ENST00000409783 Q8N1X5 172 aa14.34□□□□□ -0.11
PTCD3-203ENST00000409783 OR10D4PQ8NGN7 298 aa14.34□□□□□ -0.11
PTCD3-203ENST00000409783 CST9LQ9H4G1 147 aa14.34□□□□□ -0.11
PTCD3-203ENST00000409783 A0A0J9YXV3 536 aa14.33□□□□□ -0.12
PTCD3-203ENST00000409783 PANO1I0J062 215 aa14.33□□□□□ -0.12
PTCD3-203ENST00000409783 CHAC1Q9BUX1 264 aa14.33□□□□□ -0.12
PTCD3-203ENST00000409783 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP14.32□□□□□ -0.12
PTCD3-203ENST00000409783 SPAG11BQ08648 103 aa14.32□□□□□ -0.12
PTCD3-203ENST00000409783 SYCNQ0VAF6 134 aa14.32□□□□□ -0.12
PTCD3-203ENST00000409783 SCXQ7RTU7 201 aa14.32□□□□□ -0.12
PTCD3-203ENST00000409783 LINC01561Q8N1V8 128 aa14.32□□□□□ -0.12
PTCD3-203ENST00000409783 ORAOV1Q8WV07 137 aa14.32□□□□□ -0.12
PTCD3-203ENST00000409783 C2orf48Q96LS8 159 aa14.32□□□□□ -0.12
PTCD3-203ENST00000409783 KRTAP4-5Q9BYR2 181 aa14.32□□□□□ -0.12
PTCD3-203ENST00000409783 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP14.32□□□□□ -0.12
PTCD3-203ENST00000409783 LINC00310P59036 64 aa14.31□□□□□ -0.12
PTCD3-203ENST00000409783 PMVKQ15126 192 aa14.31□□□□□ -0.12
PTCD3-203ENST00000409783 CARD19Q96LW7 228 aa14.31□□□□□ -0.12
PTCD3-203ENST00000409783 HERVK_113P63121 156 aa14.3□□□□□ -0.12
PTCD3-203ENST00000409783 SEC11AP67812 179 aa14.3□□□□□ -0.12
PTCD3-203ENST00000409783 CIRBPQ14011 172 aaKnown RBP14.3□□□□□ -0.12
PTCD3-203ENST00000409783 KIAA0087Q14695 138 aa14.3□□□□□ -0.12
PTCD3-203ENST00000409783 Q6ZRU5 148 aa14.3□□□□□ -0.12
PTCD3-203ENST00000409783 BAGE3Q86Y29 109 aa14.3□□□□□ -0.12
PTCD3-203ENST00000409783 CIRBP-AS1Q8TBR5 109 aa14.29□□□□□ -0.12
PTCD3-203ENST00000409783 CDKN2A-AS1Q9UH64 79 aa14.29□□□□□ -0.12
PTCD3-203ENST00000409783 TINCRA0A1B0GVN0 87 aa14.28□□□□□ -0.12
PTCD3-203ENST00000409783 SMR3BP02814 79 aaPredicted RBP14.28□□□□□ -0.12
PTCD3-203ENST00000409783 CAMK2N2Q96S95 79 aa14.28□□□□□ -0.12
PTCD3-203ENST00000409783 IGLV5-45A0A087WSX0 123 aa14.27□□□□□ -0.13
PTCD3-203ENST00000409783 ATP5LO75964 103 aa14.27□□□□□ -0.13
PTCD3-203ENST00000409783 GEMIN7Q9H840 131 aaKnown RBP14.27□□□□□ -0.13
PTCD3-203ENST00000409783 SERF1AO75920 110 aa14.26□□□□□ -0.13
PTCD3-203ENST00000409783 CHTF8P0CG12 524 aa14.26□□□□□ -0.13
PTCD3-203ENST00000409783 F8WDY8 70 aa14.25□□□□□ -0.13
PTCD3-203ENST00000409783 HSBP1O75506 76 aa14.25□□□□□ -0.13
PTCD3-203ENST00000409783 FAM19A2Q8N3H0 131 aa14.25□□□□□ -0.13
PTCD3-203ENST00000409783 NUPR1O60356 82 aa14.24□□□□□ -0.13
PTCD3-203ENST00000409783 SPACA4Q8TDM5 124 aa14.24□□□□□ -0.13
PTCD3-203ENST00000409783 ABCA13Q86UQ4 5058 aa14.23□□□□□ -0.13
PTCD3-203ENST00000409783 ATP6V1G1O75348 118 aa14.23□□□□□ -0.13
PTCD3-203ENST00000409783 IGLC3P0DOY3 106 aa14.23□□□□□ -0.13
PTCD3-203ENST00000409783 C10orf25Q5T742 122 aa14.23□□□□□ -0.13
PTCD3-203ENST00000409783 LINC00469Q8N7U9 141 aa14.23□□□□□ -0.13
PTCD3-203ENST00000409783 A0A096LNI7 61 aa14.22□□□□□ -0.13
PTCD3-203ENST00000409783 S100A1P23297 94 aa14.22□□□□□ -0.13
PTCD3-203ENST00000409783 NDUFA6P56556 154 aa14.22□□□□□ -0.13
PTCD3-203ENST00000409783 RNF151Q2KHN1 245 aa14.22□□□□□ -0.13
PTCD3-203ENST00000409783 UNQ6190/PRO20217Q6UXQ8 127 aa14.22□□□□□ -0.13
PTCD3-203ENST00000409783 MRPL35Q9NZE8 188 aaKnown RBP14.22□□□□□ -0.13
PTCD3-203ENST00000409783 VPS13BQ7Z7G8 4022 aa14.21□□□□□ -0.13
PTCD3-203ENST00000409783 SMIM1B2RUZ4 78 aa14.21□□□□□ -0.13
PTCD3-203ENST00000409783 NDUFA1O15239 70 aa14.21□□□□□ -0.13
PTCD3-203ENST00000409783 HIST1H2BKO60814 126 aa14.21□□□□□ -0.13
PTCD3-203ENST00000409783 HIST1H2BJP06899 126 aa14.21□□□□□ -0.13
PTCD3-203ENST00000409783 HIST1H2BOP23527 126 aa14.21□□□□□ -0.13
PTCD3-203ENST00000409783 HIST1H2BBP33778 126 aa14.21□□□□□ -0.13
PTCD3-203ENST00000409783 HIST1H2BDP58876 126 aa14.21□□□□□ -0.13
PTCD3-203ENST00000409783 HIST1H2BCP62807 126 aa14.21□□□□□ -0.13
PTCD3-203ENST00000409783 HIST2H2BEQ16778 126 aa14.21□□□□□ -0.13
PTCD3-203ENST00000409783 HIST2H2BFQ5QNW6 126 aaPredicted RBP14.21□□□□□ -0.13
PTCD3-203ENST00000409783 HIST1H2BHQ93079 126 aa14.21□□□□□ -0.13
PTCD3-203ENST00000409783 HIST1H2BNQ99877 126 aa14.21□□□□□ -0.13
PTCD3-203ENST00000409783 HIST1H2BMQ99879 126 aa14.21□□□□□ -0.13
PTCD3-203ENST00000409783 IFI27L1Q96BM0 104 aa14.2□□□□□ -0.14
PTCD3-203ENST00000409783 Q5VSD8 79 aa14.19□□□□□ -0.14
PTCD3-203ENST00000409783 C2orf82Q6UX34 121 aa14.19□□□□□ -0.14
PTCD3-203ENST00000409783 Q8IZM0 81 aa14.19□□□□□ -0.14
PTCD3-203ENST00000409783 C6orf48Q9UBA6 75 aa14.19□□□□□ -0.14
PTCD3-203ENST00000409783 A0A087WYN8 130 aa14.18□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 78.5 ms