RNA–Protein interactions for RNA: ENST00000409739.2

TRAF3IP1-203, Transcript of TRAF3 interacting protein 1, humanhuman

TSL 3

Gene TRAF3IP1, Length 1,070 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3IP1-203ENST00000409739 LINC01546A6NGU7 62 aa19.99■□□□□ 0.79
TRAF3IP1-203ENST00000409739 IGIPA6NJ69 53 aa19.99■□□□□ 0.79
TRAF3IP1-203ENST00000409739 TEX43Q6ZNM6 134 aa19.99■□□□□ 0.79
TRAF3IP1-203ENST00000409739 IGHV3OR16-9A0A0B4J2B5 98 aa19.98■□□□□ 0.79
TRAF3IP1-203ENST00000409739 G0S2P27469 103 aa19.98■□□□□ 0.79
TRAF3IP1-203ENST00000409739 LINC00173Q6ZV60 143 aa19.98■□□□□ 0.79
TRAF3IP1-203ENST00000409739 TOMM6Q96B49 74 aa19.98■□□□□ 0.79
TRAF3IP1-203ENST00000409739 PANO1I0J062 215 aa19.97■□□□□ 0.79
TRAF3IP1-203ENST00000409739 NPSP0C0P6 89 aa19.97■□□□□ 0.79
TRAF3IP1-203ENST00000409739 Q6ZN92 141 aa19.97■□□□□ 0.79
TRAF3IP1-203ENST00000409739 ZNF561-AS1K7EIQ3 104 aa19.96■□□□□ 0.79
TRAF3IP1-203ENST00000409739 ZC2HC1BQ5TFG8 222 aa19.96■□□□□ 0.79
TRAF3IP1-203ENST00000409739 AMELXQ99217 191 aa19.96■□□□□ 0.79
TRAF3IP1-203ENST00000409739 C2orf88Q9BSF0 95 aa19.95■□□□□ 0.78
TRAF3IP1-203ENST00000409739 UBE2D1P51668 147 aa19.94■□□□□ 0.78
TRAF3IP1-203ENST00000409739 LINC00242Q5T6M2 205 aa19.94■□□□□ 0.78
TRAF3IP1-203ENST00000409739 TIMM17AQ99595 171 aa19.94■□□□□ 0.78
TRAF3IP1-203ENST00000409739 FAM229AH3BQW9 127 aa19.93■□□□□ 0.78
TRAF3IP1-203ENST00000409739 APOMO95445 188 aa19.93■□□□□ 0.78
TRAF3IP1-203ENST00000409739 FA2HQ7L5A8 372 aa19.93■□□□□ 0.78
TRAF3IP1-203ENST00000409739 CARD19Q96LW7 228 aa19.93■□□□□ 0.78
TRAF3IP1-203ENST00000409739 VCX2Q9H322 139 aa19.93■□□□□ 0.78
TRAF3IP1-203ENST00000409739 VPS13BQ7Z7G8 4022 aa19.92■□□□□ 0.78
TRAF3IP1-203ENST00000409739 IGLV4-69A0A075B6H9 119 aa19.92■□□□□ 0.78
TRAF3IP1-203ENST00000409739 CIRBPQ14011 172 aaKnown RBP19.92■□□□□ 0.78
TRAF3IP1-203ENST00000409739 CBLN2Q8IUK8 224 aa19.92■□□□□ 0.78
TRAF3IP1-203ENST00000409739 LINC00528Q8N1L1 170 aa19.92■□□□□ 0.78
TRAF3IP1-203ENST00000409739 COX6A2Q02221 97 aa19.91■□□□□ 0.78
TRAF3IP1-203ENST00000409739 C18orf32Q8TCD1 76 aa19.91■□□□□ 0.78
TRAF3IP1-203ENST00000409739 SMCO4Q9NRQ5 59 aa19.91■□□□□ 0.78
TRAF3IP1-203ENST00000409739 CHTF8P0CG12 524 aa19.9■□□□□ 0.78
TRAF3IP1-203ENST00000409739 SYCNQ0VAF6 134 aa19.9■□□□□ 0.78
TRAF3IP1-203ENST00000409739 SPAG11BQ08648 103 aa19.88■□□□□ 0.77
TRAF3IP1-203ENST00000409739 PAPPA-AS1Q5QFB9 102 aa19.88■□□□□ 0.77
TRAF3IP1-203ENST00000409739 ERASQ7Z444 233 aa19.88■□□□□ 0.77
TRAF3IP1-203ENST00000409739 OR10D4PQ8NGN7 298 aa19.88■□□□□ 0.77
TRAF3IP1-203ENST00000409739 SCGB3A1Q96QR1 104 aa19.88■□□□□ 0.77
TRAF3IP1-203ENST00000409739 SRRM2Q9UQ35 2752 aaKnown RBP19.87■□□□□ 0.77
TRAF3IP1-203ENST00000409739 SPACA4Q8TDM5 124 aa19.87■□□□□ 0.77
TRAF3IP1-203ENST00000409739 ORAOV1Q8WV07 137 aa19.87■□□□□ 0.77
TRAF3IP1-203ENST00000409739 A0A087WZ39 114 aa19.86■□□□□ 0.77
TRAF3IP1-203ENST00000409739 URB1-AS1Q96HZ7 61 aa19.86■□□□□ 0.77
TRAF3IP1-203ENST00000409739 LINC01549A6NIU2 74 aa19.85■□□□□ 0.77
TRAF3IP1-203ENST00000409739 Q6ZRU5 148 aa19.85■□□□□ 0.77
TRAF3IP1-203ENST00000409739 C2orf48Q96LS8 159 aa19.85■□□□□ 0.77
TRAF3IP1-203ENST00000409739 CAMK2N2Q96S95 79 aa19.85■□□□□ 0.77
TRAF3IP1-203ENST00000409739 FAM19A3Q7Z5A8 133 aa19.83■□□□□ 0.77
TRAF3IP1-203ENST00000409739 A0A096LNI7 61 aa19.81■□□□□ 0.76
TRAF3IP1-203ENST00000409739 IGKV2-24A0A0C4DH68 120 aa19.81■□□□□ 0.76
TRAF3IP1-203ENST00000409739 A0A096LNJ9 63 aa19.8■□□□□ 0.76
TRAF3IP1-203ENST00000409739 LINC00614P0C842 121 aa19.8■□□□□ 0.76
TRAF3IP1-203ENST00000409739 PKIGQ9Y2B9 76 aa19.8■□□□□ 0.76
TRAF3IP1-203ENST00000409739 A0A087WYN8 130 aa19.79■□□□□ 0.76
TRAF3IP1-203ENST00000409739 PLA2G1BP04054 148 aaKnown RBP19.79■□□□□ 0.76
TRAF3IP1-203ENST00000409739 DPH3Q96FX2 82 aa19.78■□□□□ 0.76
TRAF3IP1-203ENST00000409739 INAFM2P0DMQ5 153 aa19.77■□□□□ 0.76
TRAF3IP1-203ENST00000409739 LINC01561Q8N1V8 128 aa19.77■□□□□ 0.76
TRAF3IP1-203ENST00000409739 HERVK_113P63121 156 aa19.76■□□□□ 0.75
TRAF3IP1-203ENST00000409739 SEC11AP67812 179 aa19.76■□□□□ 0.75
TRAF3IP1-203ENST00000409739 MAJINQ3KP22 176 aa19.76■□□□□ 0.75
TRAF3IP1-203ENST00000409739 F8WDY8 70 aa19.75■□□□□ 0.75
TRAF3IP1-203ENST00000409739 A0A0J9YXV3 536 aa19.74■□□□□ 0.75
TRAF3IP1-203ENST00000409739 RAB5BP61020 215 aa19.74■□□□□ 0.75
TRAF3IP1-203ENST00000409739 KIAA0087Q14695 138 aa19.74■□□□□ 0.75
TRAF3IP1-203ENST00000409739 PMCHL1Q16048 86 aa19.74■□□□□ 0.75
TRAF3IP1-203ENST00000409739 PLAC8Q9NZF1 115 aa19.74■□□□□ 0.75
TRAF3IP1-203ENST00000409739 LOC107984640A0A0U1RRK4 108 aa19.73■□□□□ 0.75
TRAF3IP1-203ENST00000409739 NDUFA1O15239 70 aa19.73■□□□□ 0.75
TRAF3IP1-203ENST00000409739 HBDP02042 147 aa19.73■□□□□ 0.75
TRAF3IP1-203ENST00000409739 CST9LQ9H4G1 147 aa19.73■□□□□ 0.75
TRAF3IP1-203ENST00000409739 GEMIN7Q9H840 131 aaKnown RBP19.73■□□□□ 0.75
TRAF3IP1-203ENST00000409739 MRPL35Q9NZE8 188 aaKnown RBP19.73■□□□□ 0.75
TRAF3IP1-203ENST00000409739 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP19.72■□□□□ 0.75
TRAF3IP1-203ENST00000409739 KRTAP10-4P60372 401 aaPredicted RBP19.72■□□□□ 0.75
TRAF3IP1-203ENST00000409739 RNF151Q2KHN1 245 aa19.72■□□□□ 0.75
TRAF3IP1-203ENST00000409739 LINC00474Q9P2X8 69 aa19.72■□□□□ 0.75
TRAF3IP1-203ENST00000409739 CDKN2A-AS1Q9UH64 79 aa19.72■□□□□ 0.75
TRAF3IP1-203ENST00000409739 PMVKQ15126 192 aa19.71■□□□□ 0.75
TRAF3IP1-203ENST00000409739 C10orf25Q5T742 122 aa19.71■□□□□ 0.75
TRAF3IP1-203ENST00000409739 FLG2Q5D862 2391 aaPredicted RBP19.71■□□□□ 0.75
TRAF3IP1-203ENST00000409739 PTTG1IPP53801 180 aa19.7■□□□□ 0.74
TRAF3IP1-203ENST00000409739 UNQ6190/PRO20217Q6UXQ8 127 aa19.69■□□□□ 0.74
TRAF3IP1-203ENST00000409739 STPG4Q8N801 248 aa19.69■□□□□ 0.74
TRAF3IP1-203ENST00000409739 TINCRA0A1B0GVN0 87 aa19.68■□□□□ 0.74
TRAF3IP1-203ENST00000409739 GAGE2BQ13066 116 aa19.68■□□□□ 0.74
TRAF3IP1-203ENST00000409739 PDZD11Q5EBL8 140 aa19.68■□□□□ 0.74
TRAF3IP1-203ENST00000409739 TRGC2P03986 189 aa19.67■□□□□ 0.74
TRAF3IP1-203ENST00000409739 C6orf48Q9UBA6 75 aa19.67■□□□□ 0.74
TRAF3IP1-203ENST00000409739 RPL37AP61513 92 aaKnown RBP19.66■□□□□ 0.74
TRAF3IP1-203ENST00000409739 LINC00469Q8N7U9 141 aa19.66■□□□□ 0.74
TRAF3IP1-203ENST00000409739 IGLV5-45A0A087WSX0 123 aa19.65■□□□□ 0.74
TRAF3IP1-203ENST00000409739 RPL18AQ02543 176 aaKnown RBP19.65■□□□□ 0.74
TRAF3IP1-203ENST00000409739 C2orf82Q6UX34 121 aa19.65■□□□□ 0.74
TRAF3IP1-203ENST00000409739 CHCHD1Q96BP2 118 aaKnown RBP19.65■□□□□ 0.74
TRAF3IP1-203ENST00000409739 PACRGQ96M98 296 aaPredicted RBP19.65■□□□□ 0.74
TRAF3IP1-203ENST00000409739 COLCA2A8K830 154 aa19.64■□□□□ 0.73
TRAF3IP1-203ENST00000409739 TOMM7Q9P0U1 55 aa19.63■□□□□ 0.73
TRAF3IP1-203ENST00000409739 PRSS2P07478 247 aa19.62■□□□□ 0.73
TRAF3IP1-203ENST00000409739 Q8IZM0 81 aa19.62■□□□□ 0.73
TRAF3IP1-203ENST00000409739 ATP5LO75964 103 aa19.61■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 97.4 ms