RNA–Protein interactions for RNA: ENST00000407422.7

SMARCB1-204, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SMARCB1, Length 1,643 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-204ENST00000407422 MALP21145 153 aa12.11□□□□□ -0.47
SMARCB1-204ENST00000407422 C7orf33Q8WU49 177 aa12.11□□□□□ -0.47
SMARCB1-204ENST00000407422 FAM104AQ969W3 186 aa12.11□□□□□ -0.47
SMARCB1-204ENST00000407422 TMEM18Q96B42 140 aa12.11□□□□□ -0.47
SMARCB1-204ENST00000407422 IGLV4-69A0A075B6H9 119 aa12.11□□□□□ -0.47
SMARCB1-204ENST00000407422 C5orf52A6NGY3 159 aa12.11□□□□□ -0.47
SMARCB1-204ENST00000407422 C5orf38Q86SI9 138 aa12.1□□□□□ -0.47
SMARCB1-204ENST00000407422 TCAPO15273 167 aa12.09□□□□□ -0.47
SMARCB1-204ENST00000407422 SERTAD4-AS1Q5TG53 156 aa12.09□□□□□ -0.47
SMARCB1-204ENST00000407422 Q6ZRU5 148 aa12.09□□□□□ -0.47
SMARCB1-204ENST00000407422 OPRPNQ99935 248 aaPredicted RBP12.09□□□□□ -0.47
SMARCB1-204ENST00000407422 TMEM218A2RU14 115 aa12.08□□□□□ -0.48
SMARCB1-204ENST00000407422 LINC00474Q9P2X8 69 aa12.08□□□□□ -0.48
SMARCB1-204ENST00000407422 TNXBP22105 4242 aa12.08□□□□□ -0.48
SMARCB1-204ENST00000407422 PPBPP02775 128 aa12.08□□□□□ -0.48
SMARCB1-204ENST00000407422 MT1HL1P0DM35 61 aa12.08□□□□□ -0.48
SMARCB1-204ENST00000407422 LBHQ53QV2 105 aaPredicted RBP12.07□□□□□ -0.48
SMARCB1-204ENST00000407422 ATP5L2Q7Z4Y8 100 aa12.07□□□□□ -0.48
SMARCB1-204ENST00000407422 PRR3P79522 188 aaKnown RBP12.06□□□□□ -0.48
SMARCB1-204ENST00000407422 ANKRD39Q53RE8 183 aa12.06□□□□□ -0.48
SMARCB1-204ENST00000407422 TMEM136Q6ZRR5 245 aa12.06□□□□□ -0.48
SMARCB1-204ENST00000407422 ORMDL3Q8N138 153 aa12.06□□□□□ -0.48
SMARCB1-204ENST00000407422 PKIGQ9Y2B9 76 aa12.06□□□□□ -0.48
SMARCB1-204ENST00000407422 PRELID3AQ96N28 172 aa12.05□□□□□ -0.48
SMARCB1-204ENST00000407422 CAMK2N2Q96S95 79 aa12.05□□□□□ -0.48
SMARCB1-204ENST00000407422 SPANXA1Q9NS26 97 aa12.05□□□□□ -0.48
SMARCB1-204ENST00000407422 PTTG1IPP53801 180 aa12.04□□□□□ -0.48
SMARCB1-204ENST00000407422 GAGE2BQ13066 116 aa12.04□□□□□ -0.48
SMARCB1-204ENST00000407422 SNRPEP62304 92 aaKnown RBP12.04□□□□□ -0.48
SMARCB1-204ENST00000407422 LOC107984640A0A0U1RRK4 108 aa12.03□□□□□ -0.48
SMARCB1-204ENST00000407422 MRPS36P82909 103 aaKnown RBP12.03□□□□□ -0.48
SMARCB1-204ENST00000407422 C2orf48Q96LS8 159 aa12.03□□□□□ -0.48
SMARCB1-204ENST00000407422 SEC11CQ9BY50 192 aa12.03□□□□□ -0.48
SMARCB1-204ENST00000407422 IGHV3OR16-9A0A0B4J2B5 98 aa12.02□□□□□ -0.49
SMARCB1-204ENST00000407422 APOMO95445 188 aa12.02□□□□□ -0.49
SMARCB1-204ENST00000407422 SPAG11BQ08648 103 aa12.02□□□□□ -0.49
SMARCB1-204ENST00000407422 PNRC1Q12796 327 aaPredicted RBP12.02□□□□□ -0.49
SMARCB1-204ENST00000407422 RAB5AP20339 215 aa12.01□□□□□ -0.49
SMARCB1-204ENST00000407422 CBLN2Q8IUK8 224 aa12.01□□□□□ -0.49
SMARCB1-204ENST00000407422 A0A0J9YXV3 536 aa12□□□□□ -0.49
SMARCB1-204ENST00000407422 LOC389332A0A1B0GUA5 103 aa12□□□□□ -0.49
SMARCB1-204ENST00000407422 IFITM10A6NMD0 228 aa12□□□□□ -0.49
SMARCB1-204ENST00000407422 COLCA2A8K830 154 aa12□□□□□ -0.49
SMARCB1-204ENST00000407422 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP12□□□□□ -0.49
SMARCB1-204ENST00000407422 MT-ND4LP03901 98 aa12□□□□□ -0.49
SMARCB1-204ENST00000407422 ANAPC16Q96DE5 110 aa12□□□□□ -0.49
SMARCB1-204ENST00000407422 UBR4Q5T4S7 5183 aa12□□□□□ -0.49
SMARCB1-204ENST00000407422 ORAOV1Q8WV07 137 aa12□□□□□ -0.49
SMARCB1-204ENST00000407422 SMCO4Q9NRQ5 59 aa12□□□□□ -0.49
SMARCB1-204ENST00000407422 CBY1Q9Y3M2 126 aa12□□□□□ -0.49
SMARCB1-204ENST00000407422 A0A1W2PNN7 141 aa11.99□□□□□ -0.49
SMARCB1-204ENST00000407422 OR10D4PQ8NGN7 298 aa11.99□□□□□ -0.49
SMARCB1-204ENST00000407422 PLA2G2DQ9UNK4 145 aa11.99□□□□□ -0.49
SMARCB1-204ENST00000407422 PRSS47A8MTI9 375 aa11.98□□□□□ -0.49
SMARCB1-204ENST00000407422 ADCYAP1P18509 176 aa11.98□□□□□ -0.49
SMARCB1-204ENST00000407422 IFI27P40305 119 aaPredicted RBP11.98□□□□□ -0.49
SMARCB1-204ENST00000407422 RPL18AQ02543 176 aaKnown RBP11.97□□□□□ -0.49
SMARCB1-204ENST00000407422 C2orf88Q9BSF0 95 aa11.97□□□□□ -0.49
SMARCB1-204ENST00000407422 PYGO1Q9Y3Y4 419 aa11.97□□□□□ -0.49
SMARCB1-204ENST00000407422 IGLV4-3A0A075B6K6 122 aa11.97□□□□□ -0.49
SMARCB1-204ENST00000407422 MAP1LC3AQ9H492 121 aa11.97□□□□□ -0.49
SMARCB1-204ENST00000407422 LAMTOR2Q9Y2Q5 125 aa11.97□□□□□ -0.49
SMARCB1-204ENST00000407422 FABP9Q0Z7S8 132 aa11.96□□□□□ -0.5
SMARCB1-204ENST00000407422 C10orf25Q5T742 122 aa11.96□□□□□ -0.5
SMARCB1-204ENST00000407422 RNF151Q2KHN1 245 aa11.95□□□□□ -0.5
SMARCB1-204ENST00000407422 C9orf116Q5BN46 136 aaPredicted RBP11.95□□□□□ -0.5
SMARCB1-204ENST00000407422 C14orf144Q96I85 54 aa11.95□□□□□ -0.5
SMARCB1-204ENST00000407422 A0A1B0GV90 55 aa11.94□□□□□ -0.5
SMARCB1-204ENST00000407422 LINC00242Q5T6M2 205 aa11.94□□□□□ -0.5
SMARCB1-204ENST00000407422 Q6ZRP5 223 aa11.94□□□□□ -0.5
SMARCB1-204ENST00000407422 Q8N8P6 123 aa11.94□□□□□ -0.5
SMARCB1-204ENST00000407422 TMEM141Q96I45 108 aa11.94□□□□□ -0.5
SMARCB1-204ENST00000407422 MRPL35Q9NZE8 188 aaKnown RBP11.94□□□□□ -0.5
SMARCB1-204ENST00000407422 TGIF2-C20orf24A0A0A6YYL0 155 aa11.93□□□□□ -0.5
SMARCB1-204ENST00000407422 ZC2HC1BQ5TFG8 222 aa11.93□□□□□ -0.5
SMARCB1-204ENST00000407422 UNQ6190/PRO20217Q6UXQ8 127 aa11.93□□□□□ -0.5
SMARCB1-204ENST00000407422 LINC01600Q96MT4 127 aa11.93□□□□□ -0.5
SMARCB1-204ENST00000407422 A0A087WZ39 114 aa11.92□□□□□ -0.5
SMARCB1-204ENST00000407422 NDUFA1O15239 70 aa11.92□□□□□ -0.5
SMARCB1-204ENST00000407422 SRSF9Q13242 221 aaKnown RBP eCLIP11.92□□□□□ -0.5
SMARCB1-204ENST00000407422 SPINK6Q6UWN8 80 aa11.92□□□□□ -0.5
SMARCB1-204ENST00000407422 C2orf66Q6UXQ4 117 aa11.92□□□□□ -0.5
SMARCB1-204ENST00000407422 F8WDY8 70 aa11.91□□□□□ -0.5
SMARCB1-204ENST00000407422 KIAA0087Q14695 138 aa11.91□□□□□ -0.5
SMARCB1-204ENST00000407422 TEX43Q6ZNM6 134 aa11.91□□□□□ -0.5
SMARCB1-204ENST00000407422 C6orf48Q9UBA6 75 aa11.91□□□□□ -0.5
SMARCB1-204ENST00000407422 CYSLTR1Q9Y271 337 aa11.91□□□□□ -0.5
SMARCB1-204ENST00000407422 UBE2D1P51668 147 aa11.9□□□□□ -0.5
SMARCB1-204ENST00000407422 LINC00173Q6ZV60 143 aa11.9□□□□□ -0.5
SMARCB1-204ENST00000407422 PHF5AQ7RTV0 110 aaKnown RBP11.9□□□□□ -0.5
SMARCB1-204ENST00000407422 IMMP2LQ96T52 175 aa11.9□□□□□ -0.5
SMARCB1-204ENST00000407422 CTDSP1Q9GZU7 261 aa11.89□□□□□ -0.51
SMARCB1-204ENST00000407422 FAM168BA1KXE4 195 aa11.89□□□□□ -0.51
SMARCB1-204ENST00000407422 ODF1Q14990 250 aa11.89□□□□□ -0.51
SMARCB1-204ENST00000407422 PSORS1C2Q9UIG4 136 aa11.89□□□□□ -0.51
SMARCB1-204ENST00000407422 ORMDL2Q53FV1 153 aa11.88□□□□□ -0.51
SMARCB1-204ENST00000407422 AMELXQ99217 191 aa11.88□□□□□ -0.51
SMARCB1-204ENST00000407422 IGIPA6NJ69 53 aa11.87□□□□□ -0.51
SMARCB1-204ENST00000407422 KIAA1644Q3SXP7 199 aa11.87□□□□□ -0.51
SMARCB1-204ENST00000407422 C2orf82Q6UX34 121 aa11.87□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms