RNA–Protein interactions for RNA: ENST00000406134.5

MSH2-202, Transcript of mutS homolog 2, humanhuman

TSL 1 (best) BASIC

Gene MSH2, Length 3,628 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH2-202ENST00000406134 LYRM7Q5U5X0 104 aa6.97□□□□□ -1.29
MSH2-202ENST00000406134 ZNF625Q96I27 306 aaPredicted RBP6.97□□□□□ -1.29
MSH2-202ENST00000406134 CSDC2Q9Y534 153 aaKnown RBP6.97□□□□□ -1.29
MSH2-202ENST00000406134 NDUFV3P56181 108 aaKnown RBP6.97□□□□□ -1.29
MSH2-202ENST00000406134 H7C423 109 aa6.97□□□□□ -1.29
MSH2-202ENST00000406134 K7EQD1 137 aa6.97□□□□□ -1.29
MSH2-202ENST00000406134 CCL24O00175 119 aa6.97□□□□□ -1.29
MSH2-202ENST00000406134 MRPL23Q16540 153 aaKnown RBP6.97□□□□□ -1.29
MSH2-202ENST00000406134 TRGV1A0A0A0MS02 117 aa6.96□□□□□ -1.3
MSH2-202ENST00000406134 LOC100131303A0A0U1RQF7 123 aa6.96□□□□□ -1.3
MSH2-202ENST00000406134 SNCGO76070 127 aa6.96□□□□□ -1.3
MSH2-202ENST00000406134 CDC42SE2Q9NRR3 84 aa6.96□□□□□ -1.3
MSH2-202ENST00000406134 RPL13AP40429 203 aaKnown RBP6.96□□□□□ -1.3
MSH2-202ENST00000406134 TRAV4A0A0B4J268 109 aa6.95□□□□□ -1.3
MSH2-202ENST00000406134 TEX49A0A1B0GTD5 131 aa6.95□□□□□ -1.3
MSH2-202ENST00000406134 SCGB1C2P0DMR2 95 aa6.95□□□□□ -1.3
MSH2-202ENST00000406134 IFITM1P13164 125 aa6.95□□□□□ -1.3
MSH2-202ENST00000406134 STHQ8IWL8 128 aa6.95□□□□□ -1.3
MSH2-202ENST00000406134 CLEC2BQ92478 149 aa6.95□□□□□ -1.3
MSH2-202ENST00000406134 C22orf24Q9Y442 160 aa6.95□□□□□ -1.3
MSH2-202ENST00000406134 TRBV10-2A0A0K0K1G8 114 aa6.94□□□□□ -1.3
MSH2-202ENST00000406134 DAZ2Q13117 558 aaKnown RBP6.94□□□□□ -1.3
MSH2-202ENST00000406134 ATXN8Q156A1 80 aa6.94□□□□□ -1.3
MSH2-202ENST00000406134 LINC01006Q8NI28 216 aa6.94□□□□□ -1.3
MSH2-202ENST00000406134 LINC00308Q8TCZ7 52 aa6.94□□□□□ -1.3
MSH2-202ENST00000406134 KMT2BQ9UMN6 2715 aaPredicted RBP6.94□□□□□ -1.3
MSH2-202ENST00000406134 TRBV10-1A0A0K0K1A3 114 aa6.94□□□□□ -1.3
MSH2-202ENST00000406134 NTN5Q8WTR8 489 aaPredicted RBP6.94□□□□□ -1.3
MSH2-202ENST00000406134 LST1O00453 97 aa6.94□□□□□ -1.3
MSH2-202ENST00000406134 NOP10Q9NPE3 64 aaKnown RBP6.94□□□□□ -1.3
MSH2-202ENST00000406134 CRLF1O75462 422 aa6.93□□□□□ -1.3
MSH2-202ENST00000406134 Q9H8V8 135 aa6.93□□□□□ -1.3
MSH2-202ENST00000406134 OTOGQ6ZRI0 2925 aa6.93□□□□□ -1.3
MSH2-202ENST00000406134 IGLV1-51P01701 117 aa6.93□□□□□ -1.3
MSH2-202ENST00000406134 PRSS2P07478 247 aa6.93□□□□□ -1.3
MSH2-202ENST00000406134 C16orf95Q9H693 158 aa6.93□□□□□ -1.3
MSH2-202ENST00000406134 KRTAP10-3P60369 221 aa6.93□□□□□ -1.3
MSH2-202ENST00000406134 HERVK_113P63121 156 aa6.93□□□□□ -1.3
MSH2-202ENST00000406134 DAZ4Q86SG3 579 aaKnown RBP6.93□□□□□ -1.3
MSH2-202ENST00000406134 DAZ3Q9NR90 486 aaKnown RBP6.93□□□□□ -1.3
MSH2-202ENST00000406134 TENM1Q9UKZ4 2725 aa6.93□□□□□ -1.3
MSH2-202ENST00000406134 LOC107984640A0A0U1RRK4 108 aa6.92□□□□□ -1.3
MSH2-202ENST00000406134 OVOL2Q9BRP0 275 aa6.92□□□□□ -1.3
MSH2-202ENST00000406134 SMIM9A6NGZ8 99 aa6.91□□□□□ -1.3
MSH2-202ENST00000406134 DEFB121Q5J5C9 76 aa6.91□□□□□ -1.3
MSH2-202ENST00000406134 Q1RN00 199 aa6.91□□□□□ -1.3
MSH2-202ENST00000406134 GCN1Q92616 2671 aaKnown RBP6.91□□□□□ -1.3
MSH2-202ENST00000406134 TRAV13-1A0A0B4J241 112 aa6.9□□□□□ -1.3
MSH2-202ENST00000406134 RNASE1P07998 156 aaKnown RBP6.9□□□□□ -1.3
MSH2-202ENST00000406134 IGLV4-60A0A075B6I1 120 aa6.9□□□□□ -1.3
MSH2-202ENST00000406134 RPL36AP83881 106 aaKnown RBP6.9□□□□□ -1.3
MSH2-202ENST00000406134 RPL36ALQ969Q0 106 aaKnown RBP6.9□□□□□ -1.3
MSH2-202ENST00000406134 FHL2Q14192 279 aa6.9□□□□□ -1.31
MSH2-202ENST00000406134 SPATA3Q8NHX4 192 aa6.9□□□□□ -1.31
MSH2-202ENST00000406134 NBEAL2Q6ZNJ1 2754 aa6.9□□□□□ -1.31
MSH2-202ENST00000406134 TMEM262E9PQX1 116 aa6.89□□□□□ -1.31
MSH2-202ENST00000406134 FAM218AQ96MZ4 157 aa6.89□□□□□ -1.31
MSH2-202ENST00000406134 C16orf74Q96GX8 76 aa6.89□□□□□ -1.31
MSH2-202ENST00000406134 DNAH3Q8TD57 4116 aa6.89□□□□□ -1.31
MSH2-202ENST00000406134 IGKV2-28A0A075B6P5 120 aa6.89□□□□□ -1.31
MSH2-202ENST00000406134 IGKV2D-28P01615 120 aa6.89□□□□□ -1.31
MSH2-202ENST00000406134 A0A0U1RRA0 63 aa6.88□□□□□ -1.31
MSH2-202ENST00000406134 TRBV6-4A0A1B0GX49 114 aa6.88□□□□□ -1.31
MSH2-202ENST00000406134 H3BT86 120 aa6.88□□□□□ -1.31
MSH2-202ENST00000406134 RPL35AP18077 110 aaKnown RBP6.88□□□□□ -1.31
MSH2-202ENST00000406134 LINC00612Q8N6U2 182 aa6.88□□□□□ -1.31
MSH2-202ENST00000406134 UBE2WQ96B02 151 aa6.87□□□□□ -1.31
MSH2-202ENST00000406134 TMEM126AQ9H061 195 aa6.87□□□□□ -1.31
MSH2-202ENST00000406134 IGHV3OR16-9A0A0B4J2B5 98 aa6.87□□□□□ -1.31
MSH2-202ENST00000406134 DGAT2L7PQ6IED9 249 aa6.87□□□□□ -1.31
MSH2-202ENST00000406134 C2orf82Q6UX34 121 aa6.87□□□□□ -1.31
MSH2-202ENST00000406134 FAM19A5Q7Z5A7 132 aaPredicted RBP6.86□□□□□ -1.31
MSH2-202ENST00000406134 TMEM243Q9BU79 118 aa6.86□□□□□ -1.31
MSH2-202ENST00000406134 UNC79Q9P2D8 2635 aa6.86□□□□□ -1.31
MSH2-202ENST00000406134 DNAH1Q9P2D7 4330 aa6.86□□□□□ -1.31
MSH2-202ENST00000406134 TRAV8-4A0A0B4J246 113 aa6.86□□□□□ -1.31
MSH2-202ENST00000406134 LINC00337Q8N6G1 96 aa6.86□□□□□ -1.31
MSH2-202ENST00000406134 COX7A2LO14548 114 aa6.86□□□□□ -1.31
MSH2-202ENST00000406134 HELZ2Q9BYK8 2649 aaKnown RBP6.85□□□□□ -1.31
MSH2-202ENST00000406134 PRIMA1Q86XR5 153 aa6.85□□□□□ -1.31
MSH2-202ENST00000406134 CHCHD5Q9BSY4 110 aa6.85□□□□□ -1.31
MSH2-202ENST00000406134 TRBV6-8A0A0A6YYG3 113 aa6.85□□□□□ -1.31
MSH2-202ENST00000406134 SMCR5Q8TEV8 140 aa6.84□□□□□ -1.31
MSH2-202ENST00000406134 X6R8D5 127 aa6.84□□□□□ -1.31
MSH2-202ENST00000406134 SDIM1Q6ZPB5 146 aa6.83□□□□□ -1.32
MSH2-202ENST00000406134 OR13C6PQ8NH95 151 aa6.83□□□□□ -1.32
MSH2-202ENST00000406134 SMR3AQ99954 134 aa6.83□□□□□ -1.32
MSH2-202ENST00000406134 HIVEP1P15822 2718 aa6.83□□□□□ -1.32
MSH2-202ENST00000406134 C9orf153Q5TBE3 101 aa6.83□□□□□ -1.32
MSH2-202ENST00000406134 C15orf53Q8NAA6 179 aa6.83□□□□□ -1.32
MSH2-202ENST00000406134 COX7B2Q8TF08 81 aa6.83□□□□□ -1.32
MSH2-202ENST00000406134 TRGV2A0A075B6R0 118 aa6.83□□□□□ -1.32
MSH2-202ENST00000406134 HILS1P60008 231 aa6.83□□□□□ -1.32
MSH2-202ENST00000406134 CIRBPQ14011 172 aaKnown RBP6.83□□□□□ -1.32
MSH2-202ENST00000406134 FAM240AA0A1B0GVK7 77 aa6.82□□□□□ -1.32
MSH2-202ENST00000406134 A0A087WZ39 114 aa6.82□□□□□ -1.32
MSH2-202ENST00000406134 J3KT08 172 aa6.82□□□□□ -1.32
MSH2-202ENST00000406134 C9orf129Q5T035 196 aaKnown RBP6.82□□□□□ -1.32
MSH2-202ENST00000406134 MIR7-3HGQ8N6C7 128 aa6.82□□□□□ -1.32
MSH2-202ENST00000406134 KLK5Q9Y337 293 aaPredicted RBP6.82□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 150.4 ms