RNA–Protein interactions for RNA: ENST00000403461.5

CEACAM1-208, Transcript of carcinoembryonic antigen related cell adhesion molecule 1, human

TSL 1 (best) BASIC

Gene CEACAM1, Length 1,263 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CEACAM1-208	ENST00000403461	IGKV3OR2-268	A0A0C4DH90	116 aa		4.18	□□□□□ -1.74
CEACAM1-208	ENST00000403461		A0A0U1RQV1	116 aa		4.18	□□□□□ -1.74
CEACAM1-208	ENST00000403461	GIP	P09681	153 aa	Predicted RBP	4.18	□□□□□ -1.74
CEACAM1-208	ENST00000403461	NKX2-5	P52952	324 aa	Predicted RBP	4.18	□□□□□ -1.74
CEACAM1-208	ENST00000403461	KRTAP10-8	P60410	259 aa		4.18	□□□□□ -1.74
CEACAM1-208	ENST00000403461	HIGD2B	Q4VC39	106 aa		4.18	□□□□□ -1.74
CEACAM1-208	ENST00000403461	AMMECR1L	Q6DCA0	310 aa		4.18	□□□□□ -1.74
CEACAM1-208	ENST00000403461	PGLYRP4	Q96LB8	373 aa		4.18	□□□□□ -1.74
CEACAM1-208	ENST00000403461	TRAV26-2	A0A0B4J265	109 aa		4.17	□□□□□ -1.74
CEACAM1-208	ENST00000403461		A0A1B0GVG6	124 aa		4.17	□□□□□ -1.74
CEACAM1-208	ENST00000403461	LINC00587	B1AMM8	73 aa		4.17	□□□□□ -1.74
CEACAM1-208	ENST00000403461		M0QY20	66 aa		4.17	□□□□□ -1.74
CEACAM1-208	ENST00000403461	TRGC1	P0CF51	173 aa		4.17	□□□□□ -1.74
CEACAM1-208	ENST00000403461	CACNG7	P62955	275 aa		4.17	□□□□□ -1.74
CEACAM1-208	ENST00000403461	ZNF726P1	Q15940	193 aa		4.17	□□□□□ -1.74
CEACAM1-208	ENST00000403461	RPL7L1	Q6DKI1	246 aa	Known RBP	4.17	□□□□□ -1.74
CEACAM1-208	ENST00000403461	RASL11A	Q6T310	242 aa		4.17	□□□□□ -1.74
CEACAM1-208	ENST00000403461	BAGE2	Q86Y30	109 aa		4.17	□□□□□ -1.74
CEACAM1-208	ENST00000403461	LINC01561	Q8N1V8	128 aa		4.17	□□□□□ -1.74
CEACAM1-208	ENST00000403461	MTURN	Q8N3F0	131 aa		4.17	□□□□□ -1.74
CEACAM1-208	ENST00000403461	ZNF664	Q8N3J9	261 aa		4.17	□□□□□ -1.74
CEACAM1-208	ENST00000403461	C15orf56	Q8N910	161 aa		4.17	□□□□□ -1.74
CEACAM1-208	ENST00000403461	CHCHD10	Q8WYQ3	142 aa	Predicted RBP	4.17	□□□□□ -1.74
CEACAM1-208	ENST00000403461	TNXB	P22105	4242 aa		4.17	□□□□□ -1.74
CEACAM1-208	ENST00000403461		A0A096LNI7	61 aa		4.16	□□□□□ -1.74
CEACAM1-208	ENST00000403461	GVQW2	A0A096LPI5	108 aa	Predicted RBP	4.16	□□□□□ -1.74
CEACAM1-208	ENST00000403461		A0A1B0GV72	72 aa		4.16	□□□□□ -1.74
CEACAM1-208	ENST00000403461	TCAP	O15273	167 aa		4.16	□□□□□ -1.74
CEACAM1-208	ENST00000403461	ARPC5	O15511	151 aa		4.16	□□□□□ -1.74
CEACAM1-208	ENST00000403461	PPBP	P02775	128 aa		4.16	□□□□□ -1.74
CEACAM1-208	ENST00000403461	RPS20	P60866	119 aa	Known RBP	4.16	□□□□□ -1.74
CEACAM1-208	ENST00000403461	FER1L6-AS1	Q8NA97	138 aa		4.16	□□□□□ -1.74
CEACAM1-208	ENST00000403461		Q8NBF4	154 aa		4.16	□□□□□ -1.74
CEACAM1-208	ENST00000403461	CARD19	Q96LW7	228 aa		4.16	□□□□□ -1.74
CEACAM1-208	ENST00000403461	NIT2	Q9NQR4	276 aa		4.16	□□□□□ -1.74
CEACAM1-208	ENST00000403461	IGHV1-58	A0A0C4DH39	117 aa		4.15	□□□□□ -1.75
CEACAM1-208	ENST00000403461	MT-ND6	P03923	174 aa		4.15	□□□□□ -1.75
CEACAM1-208	ENST00000403461	SCGB1A1	P11684	91 aa		4.15	□□□□□ -1.75
CEACAM1-208	ENST00000403461	LCE1F	Q5T754	118 aa		4.15	□□□□□ -1.75
CEACAM1-208	ENST00000403461	C12orf57	Q99622	126 aa		4.15	□□□□□ -1.75
CEACAM1-208	ENST00000403461	PSORS1C2	Q9UIG4	136 aa		4.15	□□□□□ -1.75
CEACAM1-208	ENST00000403461		F2Z2F3	143 aa		4.14	□□□□□ -1.75
CEACAM1-208	ENST00000403461		K7EN84	100 aa		4.14	□□□□□ -1.75
CEACAM1-208	ENST00000403461	APCS	P02743	223 aa		4.14	□□□□□ -1.75
CEACAM1-208	ENST00000403461	SFT2D1	Q8WV19	159 aa		4.14	□□□□□ -1.75
CEACAM1-208	ENST00000403461	TMEM101	Q96IK0	257 aa		4.14	□□□□□ -1.75
CEACAM1-208	ENST00000403461	BTF3L4	Q96K17	158 aa		4.14	□□□□□ -1.75
CEACAM1-208	ENST00000403461	C2orf88	Q9BSF0	95 aa		4.14	□□□□□ -1.75
CEACAM1-208	ENST00000403461		G3V3Q6	166 aa		4.13	□□□□□ -1.75
CEACAM1-208	ENST00000403461	PPP1R2P9	O14990	202 aa		4.13	□□□□□ -1.75
CEACAM1-208	ENST00000403461	NCR2	O95944	276 aa		4.13	□□□□□ -1.75
CEACAM1-208	ENST00000403461	ZNF25	P17030	456 aa	Predicted RBP	4.13	□□□□□ -1.75
CEACAM1-208	ENST00000403461	XCL1	P47992	114 aa		4.13	□□□□□ -1.75
CEACAM1-208	ENST00000403461	SYCN	Q0VAF6	134 aa		4.13	□□□□□ -1.75
CEACAM1-208	ENST00000403461	RIG	Q13278	110 aa		4.13	□□□□□ -1.75
CEACAM1-208	ENST00000403461	DIRC1	Q969H9	104 aa		4.13	□□□□□ -1.75
CEACAM1-208	ENST00000403461	LOC107984640	A0A0U1RRK4	108 aa		4.12	□□□□□ -1.75
CEACAM1-208	ENST00000403461		A0A1B0GV50	99 aa		4.12	□□□□□ -1.75
CEACAM1-208	ENST00000403461	UMAD1	C9J7I0	102 aa		4.12	□□□□□ -1.75
CEACAM1-208	ENST00000403461	IGLC6	P0CF74	106 aa		4.12	□□□□□ -1.75
CEACAM1-208	ENST00000403461	FGF6	P10767	208 aa		4.12	□□□□□ -1.75
CEACAM1-208	ENST00000403461	NTF3	P20783	257 aa		4.12	□□□□□ -1.75
CEACAM1-208	ENST00000403461	RPL35	P42766	123 aa	Known RBP	4.12	□□□□□ -1.75
CEACAM1-208	ENST00000403461	SS18	Q15532	418 aa		4.12	□□□□□ -1.75
CEACAM1-208	ENST00000403461	TMUB2	Q71RG4	321 aa		4.12	□□□□□ -1.75
CEACAM1-208	ENST00000403461	KCNRG	Q8N5I3	272 aa		4.12	□□□□□ -1.75
CEACAM1-208	ENST00000403461	FAM213B	Q8TBF2	198 aa		4.12	□□□□□ -1.75
CEACAM1-208	ENST00000403461	BIN3	Q9NQY0	253 aa		4.12	□□□□□ -1.75
CEACAM1-208	ENST00000403461	IGKV2D-29	A0A075B6S2	120 aa	Predicted RBP	4.11	□□□□□ -1.75
CEACAM1-208	ENST00000403461	KANTR	A0A1W2PQU2	76 aa		4.11	□□□□□ -1.75
CEACAM1-208	ENST00000403461	IGKV2-29	A2NJV5	120 aa	Predicted RBP	4.11	□□□□□ -1.75
CEACAM1-208	ENST00000403461	CCL25	O15444	150 aa		4.11	□□□□□ -1.75
CEACAM1-208	ENST00000403461	IFNA1	P01562	189 aa		4.11	□□□□□ -1.75
CEACAM1-208	ENST00000403461	SMIM6	P0DI80	62 aa		4.11	□□□□□ -1.75
CEACAM1-208	ENST00000403461	EIF5A	P63241	154 aa	Known RBP	4.11	□□□□□ -1.75
CEACAM1-208	ENST00000403461	TAL2	Q16559	108 aa		4.11	□□□□□ -1.75
CEACAM1-208	ENST00000403461	C1orf137	Q5JT78	98 aa		4.11	□□□□□ -1.75
CEACAM1-208	ENST00000403461	EIF5AL1	Q6IS14	154 aa	Known RBP	4.11	□□□□□ -1.75
CEACAM1-208	ENST00000403461	KRTAP5-1	Q6L8H4	278 aa		4.11	□□□□□ -1.75
CEACAM1-208	ENST00000403461	TEX261	Q6UWH6	196 aa		4.11	□□□□□ -1.75
CEACAM1-208	ENST00000403461		Q6ZVQ6	151 aa		4.11	□□□□□ -1.75
CEACAM1-208	ENST00000403461	OR5A1	Q8NGJ0	315 aa		4.11	□□□□□ -1.75
CEACAM1-208	ENST00000403461	TSKU	Q8WUA8	353 aa		4.11	□□□□□ -1.75
CEACAM1-208	ENST00000403461	SMIM12	Q96EX1	92 aa		4.11	□□□□□ -1.75
CEACAM1-208	ENST00000403461	CYTL1	Q9NRR1	136 aa		4.11	□□□□□ -1.75
CEACAM1-208	ENST00000403461	IGLV4-69	A0A075B6H9	119 aa		4.1	□□□□□ -1.75
CEACAM1-208	ENST00000403461	TRAV1-1	A0A0B4J248	108 aa		4.1	□□□□□ -1.75
CEACAM1-208	ENST00000403461	APOM	O95445	188 aa		4.1	□□□□□ -1.75
CEACAM1-208	ENST00000403461	S100A8	P05109	93 aa		4.1	□□□□□ -1.75
CEACAM1-208	ENST00000403461	GNG4	P50150	75 aa		4.1	□□□□□ -1.75
CEACAM1-208	ENST00000403461	UBE2D1	P51668	147 aa		4.1	□□□□□ -1.75
CEACAM1-208	ENST00000403461	RPL18A	Q02543	176 aa	Known RBP	4.1	□□□□□ -1.75
CEACAM1-208	ENST00000403461	ZNF345	Q14585	488 aa		4.1	□□□□□ -1.75
CEACAM1-208	ENST00000403461	PRR4	Q16378	134 aa		4.1	□□□□□ -1.75
CEACAM1-208	ENST00000403461	PDZD11	Q5EBL8	140 aa		4.1	□□□□□ -1.75
CEACAM1-208	ENST00000403461	CENPW	Q5EE01	88 aa		4.1	□□□□□ -1.75
CEACAM1-208	ENST00000403461	LYZL1	Q6UWQ5	148 aa		4.1	□□□□□ -1.75
CEACAM1-208	ENST00000403461	MBD3L1	Q8WWY6	194 aa		4.1	□□□□□ -1.75
CEACAM1-208	ENST00000403461	CAMK2N2	Q96S95	79 aa		4.1	□□□□□ -1.75
CEACAM1-208	ENST00000403461	MANBAL	Q9NQG1	85 aa		4.1	□□□□□ -1.75

Retrieved 100 of 20,778 RNA–protein pairs in 71.8 ms