RNA–Protein interactions for RNA: ENST00000400075.3

GABPA-202, Transcript of GA binding protein transcription factor subunit alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GABPA, Length 4,814 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPA-202ENST00000400075 MRPS12O15235 138 aaKnown RBP10.35□□□□□ -0.75
GABPA-202ENST00000400075 LOC105371267A0A1B0GV96 52 aa10.35□□□□□ -0.75
GABPA-202ENST00000400075 FHL2Q14192 279 aa10.35□□□□□ -0.75
GABPA-202ENST00000400075 NUPR1O60356 82 aa10.33□□□□□ -0.76
GABPA-202ENST00000400075 TSHBP01222 138 aa10.33□□□□□ -0.76
GABPA-202ENST00000400075 MDFIQ99750 246 aa10.33□□□□□ -0.76
GABPA-202ENST00000400075 C9orf118A6NHY6 69 aa10.33□□□□□ -0.76
GABPA-202ENST00000400075 ZNF22P17026 224 aaPredicted RBP10.32□□□□□ -0.76
GABPA-202ENST00000400075 NPSP0C0P6 89 aa10.32□□□□□ -0.76
GABPA-202ENST00000400075 NREPQ16612 68 aa10.32□□□□□ -0.76
GABPA-202ENST00000400075 POLR2KP53803 58 aaKnown RBP10.32□□□□□ -0.76
GABPA-202ENST00000400075 WFDC9Q8NEX5 89 aa10.32□□□□□ -0.76
GABPA-202ENST00000400075 RNF185Q96GF1 192 aa10.32□□□□□ -0.76
GABPA-202ENST00000400075 IGKV2-28A0A075B6P5 120 aa10.31□□□□□ -0.76
GABPA-202ENST00000400075 IGKV2D-26A0A0A0MRZ7 120 aa10.31□□□□□ -0.76
GABPA-202ENST00000400075 IGKV2D-28P01615 120 aa10.31□□□□□ -0.76
GABPA-202ENST00000400075 MRPL52Q86TS9 123 aaKnown RBP10.31□□□□□ -0.76
GABPA-202ENST00000400075 UBE2D4Q9Y2X8 147 aa10.31□□□□□ -0.76
GABPA-202ENST00000400075 ZNF706Q9Y5V0 76 aaPredicted RBP10.3□□□□□ -0.76
GABPA-202ENST00000400075 USP17L23D6RBM5 183 aa10.3□□□□□ -0.76
GABPA-202ENST00000400075 ETDBQ3ZM63 59 aa10.3□□□□□ -0.76
GABPA-202ENST00000400075 SPANXDQ9BXN6 97 aa10.3□□□□□ -0.76
GABPA-202ENST00000400075 LYPD5Q6UWN5 251 aa10.3□□□□□ -0.76
GABPA-202ENST00000400075 SIGMAR1Q99720 223 aa10.29□□□□□ -0.76
GABPA-202ENST00000400075 A0A0J9YXY3 114 aa10.29□□□□□ -0.76
GABPA-202ENST00000400075 FOXI1Q12951 378 aa10.29□□□□□ -0.76
GABPA-202ENST00000400075 POM121L12Q8N7R1 296 aa10.29□□□□□ -0.76
GABPA-202ENST00000400075 MRPS36P82909 103 aaKnown RBP10.28□□□□□ -0.76
GABPA-202ENST00000400075 WFDC10BQ8IUB3 73 aa10.28□□□□□ -0.76
GABPA-202ENST00000400075 CDC42SE2Q9NRR3 84 aa10.28□□□□□ -0.76
GABPA-202ENST00000400075 PPDPFLQ8WWR9 84 aa10.28□□□□□ -0.76
GABPA-202ENST00000400075 CYSRT1A8MQ03 144 aa10.28□□□□□ -0.76
GABPA-202ENST00000400075 H3BMG7 143 aa10.28□□□□□ -0.76
GABPA-202ENST00000400075 NTN5Q8WTR8 489 aaPredicted RBP10.28□□□□□ -0.76
GABPA-202ENST00000400075 H0Y9J4 135 aa10.27□□□□□ -0.76
GABPA-202ENST00000400075 PPDPFQ9H3Y8 114 aa10.27□□□□□ -0.77
GABPA-202ENST00000400075 SPANXB1Q9NS25 103 aaPredicted RBP10.27□□□□□ -0.77
GABPA-202ENST00000400075 COL6A5A8TX70 2615 aa10.27□□□□□ -0.77
GABPA-202ENST00000400075 JMJD7-PLA2G4BH0Y9G9 81 aa10.26□□□□□ -0.77
GABPA-202ENST00000400075 NRACQ8N912 160 aa10.26□□□□□ -0.77
GABPA-202ENST00000400075 CELA1Q9UNI1 258 aa10.26□□□□□ -0.77
GABPA-202ENST00000400075 PLAC8L1A1L4L8 177 aa10.26□□□□□ -0.77
GABPA-202ENST00000400075 RBM3P98179 157 aaKnown RBP10.26□□□□□ -0.77
GABPA-202ENST00000400075 UBE2V1Q13404 147 aa10.26□□□□□ -0.77
GABPA-202ENST00000400075 A0A1W2PPM0 123 aa10.25□□□□□ -0.77
GABPA-202ENST00000400075 M0R378 163 aa10.25□□□□□ -0.77
GABPA-202ENST00000400075 CHD9Q3L8U1 2897 aa10.24□□□□□ -0.77
GABPA-202ENST00000400075 TMEM256-PLSCR3K7ERE1 68 aa10.24□□□□□ -0.77
GABPA-202ENST00000400075 HIGD1BQ9P298 99 aa10.24□□□□□ -0.77
GABPA-202ENST00000400075 C6orf223Q8N319 242 aa10.24□□□□□ -0.77
GABPA-202ENST00000400075 TMEM223A0PJW6 202 aa10.24□□□□□ -0.77
GABPA-202ENST00000400075 EGFEM1PQ0D2K5 195 aa10.24□□□□□ -0.77
GABPA-202ENST00000400075 SPATA12Q7Z6I5 190 aa10.24□□□□□ -0.77
GABPA-202ENST00000400075 RPL37AP8A6NKH3 93 aa10.23□□□□□ -0.77
GABPA-202ENST00000400075 RPL28P46779 137 aaKnown RBP10.23□□□□□ -0.77
GABPA-202ENST00000400075 CNFNQ9BYD5 112 aa10.23□□□□□ -0.77
GABPA-202ENST00000400075 F8W1H4 67 aa10.23□□□□□ -0.77
GABPA-202ENST00000400075 Q8IZM0 81 aa10.22□□□□□ -0.77
GABPA-202ENST00000400075 UNQ6190/PRO20217Q6UXQ8 127 aa10.22□□□□□ -0.77
GABPA-202ENST00000400075 M0QXV9 152 aa10.22□□□□□ -0.77
GABPA-202ENST00000400075 COX6A2Q02221 97 aa10.22□□□□□ -0.77
GABPA-202ENST00000400075 C21orf62-AS1Q17RA5 79 aa10.22□□□□□ -0.77
GABPA-202ENST00000400075 A0A096LNT2 108 aa10.21□□□□□ -0.77
GABPA-202ENST00000400075 C6orf99Q4VX62 202 aa10.21□□□□□ -0.77
GABPA-202ENST00000400075 IGLV4-60A0A075B6I1 120 aa10.21□□□□□ -0.78
GABPA-202ENST00000400075 LINC00308Q8TCZ7 52 aa10.21□□□□□ -0.78
GABPA-202ENST00000400075 FXYD2P54710 66 aa10.21□□□□□ -0.78
GABPA-202ENST00000400075 ANAPC13Q9BS18 74 aa10.21□□□□□ -0.78
GABPA-202ENST00000400075 TRAV23DV6A0A075B6W5 121 aa10.2□□□□□ -0.78
GABPA-202ENST00000400075 PDE6GP18545 87 aa10.2□□□□□ -0.78
GABPA-202ENST00000400075 PCSK5Q92824 1860 aa10.2□□□□□ -0.78
GABPA-202ENST00000400075 A8MZ25 164 aa10.2□□□□□ -0.78
GABPA-202ENST00000400075 K7EP13 123 aa10.2□□□□□ -0.78
GABPA-202ENST00000400075 LINC01620Q4KN68 170 aa10.19□□□□□ -0.78
GABPA-202ENST00000400075 DLEU1O43261 78 aa10.19□□□□□ -0.78
GABPA-202ENST00000400075 TEX15Q9BXT5 2789 aa10.19□□□□□ -0.78
GABPA-202ENST00000400075 TRBV30A0A0K0K1B3 111 aa10.19□□□□□ -0.78
GABPA-202ENST00000400075 K7EP34 96 aa10.19□□□□□ -0.78
GABPA-202ENST00000400075 CHD6Q8TD26 2715 aa10.19□□□□□ -0.78
GABPA-202ENST00000400075 SPINK6Q6UWN8 80 aa10.18□□□□□ -0.78
GABPA-202ENST00000400075 CLEC2BQ92478 149 aa10.18□□□□□ -0.78
GABPA-202ENST00000400075 DHRS4-AS1Q9P1J3 65 aa10.18□□□□□ -0.78
GABPA-202ENST00000400075 HTTP42858 3142 aa10.17□□□□□ -0.78
GABPA-202ENST00000400075 GAS8-AS1O95177 125 aa10.17□□□□□ -0.78
GABPA-202ENST00000400075 COX17Q14061 63 aa10.17□□□□□ -0.78
GABPA-202ENST00000400075 A0A1B0GUV1 79 aa10.17□□□□□ -0.78
GABPA-202ENST00000400075 LINC00242Q5T6M2 205 aa10.17□□□□□ -0.78
GABPA-202ENST00000400075 TRBV10-2A0A0K0K1G8 114 aa10.17□□□□□ -0.78
GABPA-202ENST00000400075 ESRGQ1W209 222 aa10.17□□□□□ -0.78
GABPA-202ENST00000400075 K7EIL1 84 aa10.16□□□□□ -0.78
GABPA-202ENST00000400075 PTH2Q96A98 100 aa10.16□□□□□ -0.78
GABPA-202ENST00000400075 UNC79Q9P2D8 2635 aa10.16□□□□□ -0.78
GABPA-202ENST00000400075 LINC00694P0DN24 101 aa10.16□□□□□ -0.78
GABPA-202ENST00000400075 LINC01556Q5JQF7 62 aa10.16□□□□□ -0.78
GABPA-202ENST00000400075 IGLV9-49A0A0B4J1Y8 123 aa10.15□□□□□ -0.78
GABPA-202ENST00000400075 A0A1B0GX51 115 aa10.15□□□□□ -0.78
GABPA-202ENST00000400075 SS18L2Q9UHA2 77 aa10.15□□□□□ -0.78
GABPA-202ENST00000400075 X6R8D5 127 aa10.15□□□□□ -0.78
GABPA-202ENST00000400075 LAMA3Q16787 3333 aa10.15□□□□□ -0.79
GABPA-202ENST00000400075 C1orf137Q5JT78 98 aa10.14□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 11.4 ms