RNA–Protein interactions for RNA: ENST00000399903.6

PTPRA-205, Transcript of protein tyrosine phosphatase, receptor type A, humanhuman

TSL 5 BASIC

Gene PTPRA, Length 3,337 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRA-205ENST00000399903 ATOX1O00244 68 aa12.35□□□□□ -0.43
PTPRA-205ENST00000399903 INAFM2P0DMQ5 153 aa12.35□□□□□ -0.43
PTPRA-205ENST00000399903 LINC01356Q8N9X3 169 aa12.35□□□□□ -0.43
PTPRA-205ENST00000399903 CHCHD7Q9BUK0 85 aa12.35□□□□□ -0.43
PTPRA-205ENST00000399903 LRRC75A-AS1Q8N1F1 130 aa12.34□□□□□ -0.43
PTPRA-205ENST00000399903 MALP21145 153 aa12.34□□□□□ -0.43
PTPRA-205ENST00000399903 C9orf129Q5T035 196 aaKnown RBP12.34□□□□□ -0.43
PTPRA-205ENST00000399903 DEFB136Q30KP8 78 aa12.33□□□□□ -0.44
PTPRA-205ENST00000399903 IGHV3-53P01767 116 aa12.32□□□□□ -0.44
PTPRA-205ENST00000399903 SLPIP03973 132 aa12.32□□□□□ -0.44
PTPRA-205ENST00000399903 RBMY1A1P0DJD3 496 aaKnown RBP12.32□□□□□ -0.44
PTPRA-205ENST00000399903 RBMY1CP0DJD4 496 aa12.32□□□□□ -0.44
PTPRA-205ENST00000399903 RBMY1FQ15415 496 aaKnown RBP12.32□□□□□ -0.44
PTPRA-205ENST00000399903 CRPP02741 224 aa12.32□□□□□ -0.44
PTPRA-205ENST00000399903 HRCT1Q6UXD1 115 aa12.32□□□□□ -0.44
PTPRA-205ENST00000399903 C18orf65Q6ZTR6 163 aa12.32□□□□□ -0.44
PTPRA-205ENST00000399903 Q96MF0 132 aa12.31□□□□□ -0.44
PTPRA-205ENST00000399903 RNASE1P07998 156 aaKnown RBP12.31□□□□□ -0.44
PTPRA-205ENST00000399903 CFHR3Q02985 330 aa12.31□□□□□ -0.44
PTPRA-205ENST00000399903 C4orf26Q17RF5 130 aa12.31□□□□□ -0.44
PTPRA-205ENST00000399903 C11orf44Q8N8P7 122 aa12.31□□□□□ -0.44
PTPRA-205ENST00000399903 WFDC9Q8NEX5 89 aa12.31□□□□□ -0.44
PTPRA-205ENST00000399903 C2orf48Q96LS8 159 aa12.31□□□□□ -0.44
PTPRA-205ENST00000399903 NCR3O14931 201 aa12.31□□□□□ -0.44
PTPRA-205ENST00000399903 C5orf38Q86SI9 138 aa12.3□□□□□ -0.44
PTPRA-205ENST00000399903 A0A096LNT2 108 aa12.3□□□□□ -0.44
PTPRA-205ENST00000399903 DEFB131AP59861 70 aa12.3□□□□□ -0.44
PTPRA-205ENST00000399903 KHDC1LQ5JSQ8 128 aa12.3□□□□□ -0.44
PTPRA-205ENST00000399903 RPL18AQ02543 176 aaKnown RBP12.29□□□□□ -0.44
PTPRA-205ENST00000399903 KLK9Q2XQG4 91 aa12.29□□□□□ -0.44
PTPRA-205ENST00000399903 A0A087WYN8 130 aa12.29□□□□□ -0.44
PTPRA-205ENST00000399903 TIMM17BO60830 172 aa12.29□□□□□ -0.44
PTPRA-205ENST00000399903 IGLV1-40P01703 118 aa12.29□□□□□ -0.44
PTPRA-205ENST00000399903 LINC00846Q9NV44 126 aa12.29□□□□□ -0.44
PTPRA-205ENST00000399903 LINC00242Q5T6M2 205 aa12.28□□□□□ -0.44
PTPRA-205ENST00000399903 C11orf68Q9H3H3 251 aaKnown RBP12.28□□□□□ -0.44
PTPRA-205ENST00000399903 CRYGAP11844 174 aa12.28□□□□□ -0.44
PTPRA-205ENST00000399903 LINC00158P58513 81 aa12.28□□□□□ -0.44
PTPRA-205ENST00000399903 CR1P17927 2039 aa12.27□□□□□ -0.44
PTPRA-205ENST00000399903 IGHV4-31P0DP07 118 aa12.27□□□□□ -0.44
PTPRA-205ENST00000399903 CXCL5P42830 114 aa12.27□□□□□ -0.44
PTPRA-205ENST00000399903 C22orf24Q9Y442 160 aa12.27□□□□□ -0.45
PTPRA-205ENST00000399903 LECT2O14960 151 aa12.27□□□□□ -0.45
PTPRA-205ENST00000399903 PFN2P35080 140 aa12.26□□□□□ -0.45
PTPRA-205ENST00000399903 MIR7-3HGQ8N6C7 128 aa12.26□□□□□ -0.45
PTPRA-205ENST00000399903 AKAP9Q99996 3911 aa12.26□□□□□ -0.45
PTPRA-205ENST00000399903 DPH3Q96FX2 82 aa12.26□□□□□ -0.45
PTPRA-205ENST00000399903 USP17L23D6RBM5 183 aa12.26□□□□□ -0.45
PTPRA-205ENST00000399903 K7EQG2 157 aa12.25□□□□□ -0.45
PTPRA-205ENST00000399903 PSMB8P28062 276 aa12.25□□□□□ -0.45
PTPRA-205ENST00000399903 HILS1P60008 231 aa12.25□□□□□ -0.45
PTPRA-205ENST00000399903 BEAN1Q3B7T3 259 aa12.25□□□□□ -0.45
PTPRA-205ENST00000399903 COPS9Q8WXC6 57 aa12.25□□□□□ -0.45
PTPRA-205ENST00000399903 SMIM1B2RUZ4 78 aa12.25□□□□□ -0.45
PTPRA-205ENST00000399903 WFDC11Q8NEX6 87 aa12.25□□□□□ -0.45
PTPRA-205ENST00000399903 SND1-IT1Q9HBX3 110 aa12.25□□□□□ -0.45
PTPRA-205ENST00000399903 TRAV23DV6A0A075B6W5 121 aa12.24□□□□□ -0.45
PTPRA-205ENST00000399903 DSCR9P59020 149 aa12.24□□□□□ -0.45
PTPRA-205ENST00000399903 UNC79Q9P2D8 2635 aa12.24□□□□□ -0.45
PTPRA-205ENST00000399903 DEFB113Q30KQ7 82 aa12.24□□□□□ -0.45
PTPRA-205ENST00000399903 LINC00337Q8N6G1 96 aa12.24□□□□□ -0.45
PTPRA-205ENST00000399903 SERP2Q8N6R1 65 aa12.24□□□□□ -0.45
PTPRA-205ENST00000399903 FN1P02751 2386 aaKnown RBP12.23□□□□□ -0.45
PTPRA-205ENST00000399903 RPL36AP83881 106 aaKnown RBP12.23□□□□□ -0.45
PTPRA-205ENST00000399903 RPL36ALQ969Q0 106 aaKnown RBP12.23□□□□□ -0.45
PTPRA-205ENST00000399903 PAX4O43316 350 aa12.22□□□□□ -0.45
PTPRA-205ENST00000399903 SMIM11BQ8TCY0 68 aa12.22□□□□□ -0.45
PTPRA-205ENST00000399903 OXTP01178 125 aa12.22□□□□□ -0.45
PTPRA-205ENST00000399903 ZNF415Q09FC8 603 aa12.22□□□□□ -0.45
PTPRA-205ENST00000399903 SLURP1P55000 103 aa12.21□□□□□ -0.45
PTPRA-205ENST00000399903 UBE2E2Q96LR5 201 aa12.21□□□□□ -0.45
PTPRA-205ENST00000399903 HIVEP2P31629 2446 aa12.21□□□□□ -0.45
PTPRA-205ENST00000399903 TRGV1A0A0A0MS02 117 aa12.21□□□□□ -0.46
PTPRA-205ENST00000399903 TRAV13-2A0A0B4J235 113 aa12.21□□□□□ -0.46
PTPRA-205ENST00000399903 K7EMT4 169 aa12.21□□□□□ -0.46
PTPRA-205ENST00000399903 LINC01561Q8N1V8 128 aa12.2□□□□□ -0.46
PTPRA-205ENST00000399903 ZNF702PQ9H963 129 aa12.2□□□□□ -0.46
PTPRA-205ENST00000399903 XCL2Q9UBD3 114 aa12.2□□□□□ -0.46
PTPRA-205ENST00000399903 GCN1Q92616 2671 aaKnown RBP12.2□□□□□ -0.46
PTPRA-205ENST00000399903 H3BUA1 57 aa12.19□□□□□ -0.46
PTPRA-205ENST00000399903 TMEM258P61165 79 aa12.19□□□□□ -0.46
PTPRA-205ENST00000399903 A0A1W2PRX2 142 aa12.19□□□□□ -0.46
PTPRA-205ENST00000399903 F5H768 121 aa12.18□□□□□ -0.46
PTPRA-205ENST00000399903 UBE2L6O14933 153 aa12.18□□□□□ -0.46
PTPRA-205ENST00000399903 IGLV5-39A0A0G2JS06 123 aa12.18□□□□□ -0.46
PTPRA-205ENST00000399903 GHRHP01286 108 aa12.18□□□□□ -0.46
PTPRA-205ENST00000399903 C20orf197Q8N268 126 aa12.18□□□□□ -0.46
PTPRA-205ENST00000399903 FAM222AQ5U5X8 452 aa12.17□□□□□ -0.46
PTPRA-205ENST00000399903 Q6YL49 198 aa12.17□□□□□ -0.46
PTPRA-205ENST00000399903 SETXQ7Z333 2677 aaKnown RBP12.16□□□□□ -0.46
PTPRA-205ENST00000399903 TRAV25A0A0B4J276 109 aa12.15□□□□□ -0.46
PTPRA-205ENST00000399903 RPS28P62857 69 aaKnown RBP12.15□□□□□ -0.46
PTPRA-205ENST00000399903 FHL2Q14192 279 aa12.15□□□□□ -0.46
PTPRA-205ENST00000399903 FAM19A1Q7Z5A9 133 aa12.15□□□□□ -0.46
PTPRA-205ENST00000399903 IGKV2-28A0A075B6P5 120 aa12.15□□□□□ -0.46
PTPRA-205ENST00000399903 RBMY1BA6NDE4 496 aaKnown RBP12.15□□□□□ -0.46
PTPRA-205ENST00000399903 RBMY1EA6NEQ0 496 aaKnown RBP12.15□□□□□ -0.46
PTPRA-205ENST00000399903 IGKV2D-28P01615 120 aa12.15□□□□□ -0.46
PTPRA-205ENST00000399903 RBMY1DP0C7P1 496 aaKnown RBP12.15□□□□□ -0.46
PTPRA-205ENST00000399903 RPL28P46779 137 aaKnown RBP12.15□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 66.1 ms