RNA–Protein interactions for RNA: ENST00000399455.2

USP47-203, Transcript of ubiquitin specific peptidase 47, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene USP47, Length 7,396 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP47-203ENST00000399455 H3BNG1 76 aa5.7□□□□□ -1.5
USP47-203ENST00000399455 PRYO14603 147 aa5.7□□□□□ -1.5
USP47-203ENST00000399455 SBSPONQ8IVN8 264 aa5.7□□□□□ -1.5
USP47-203ENST00000399455 LINC00526Q96FQ7 95 aa5.69□□□□□ -1.5
USP47-203ENST00000399455 ANKRD39Q53RE8 183 aa5.69□□□□□ -1.5
USP47-203ENST00000399455 Q6JHZ5 121 aa5.69□□□□□ -1.5
USP47-203ENST00000399455 LINC01561Q8N1V8 128 aa5.69□□□□□ -1.5
USP47-203ENST00000399455 PRRC2AP48634 2157 aaKnown RBP5.69□□□□□ -1.5
USP47-203ENST00000399455 ATOX1O00244 68 aa5.69□□□□□ -1.5
USP47-203ENST00000399455 IGKV3D-7A0A0C4DH55 119 aa5.69□□□□□ -1.5
USP47-203ENST00000399455 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP5.69□□□□□ -1.5
USP47-203ENST00000399455 MRPL55Q7Z7F7 128 aaKnown RBP5.69□□□□□ -1.5
USP47-203ENST00000399455 WFDC10BQ8IUB3 73 aa5.68□□□□□ -1.5
USP47-203ENST00000399455 C6orf99Q4VX62 202 aa5.68□□□□□ -1.5
USP47-203ENST00000399455 PRR15LQ9BU68 103 aa5.68□□□□□ -1.5
USP47-203ENST00000399455 ETDBQ3ZM63 59 aa5.68□□□□□ -1.5
USP47-203ENST00000399455 LST1O00453 97 aa5.68□□□□□ -1.5
USP47-203ENST00000399455 PRM2P04554 102 aa5.68□□□□□ -1.5
USP47-203ENST00000399455 XGP55808 180 aa5.68□□□□□ -1.5
USP47-203ENST00000399455 C5orf47Q569G3 176 aa5.68□□□□□ -1.5
USP47-203ENST00000399455 SHANK1Q9Y566 2161 aa5.68□□□□□ -1.5
USP47-203ENST00000399455 A0A1B0GUV1 79 aa5.68□□□□□ -1.5
USP47-203ENST00000399455 NDUFC2-KCTD14E9PQ53 114 aa5.67□□□□□ -1.5
USP47-203ENST00000399455 CCKP06307 115 aa5.67□□□□□ -1.5
USP47-203ENST00000399455 ATP5EP2Q5VTU8 51 aa5.67□□□□□ -1.5
USP47-203ENST00000399455 PCP4P48539 62 aa5.66□□□□□ -1.5
USP47-203ENST00000399455 NRACQ8N912 160 aa5.66□□□□□ -1.5
USP47-203ENST00000399455 NUPR1O60356 82 aa5.66□□□□□ -1.5
USP47-203ENST00000399455 TEX49A0A1B0GTD5 131 aa5.66□□□□□ -1.5
USP47-203ENST00000399455 NBDYA0A0U1RRE5 68 aa5.66□□□□□ -1.5
USP47-203ENST00000399455 NBASA2RRP1 2371 aa5.65□□□□□ -1.5
USP47-203ENST00000399455 COA6Q5JTJ3 125 aaKnown RBP5.65□□□□□ -1.5
USP47-203ENST00000399455 HCFC1P51610 2035 aa5.65□□□□□ -1.5
USP47-203ENST00000399455 RTL8CO15255 209 aa5.65□□□□□ -1.51
USP47-203ENST00000399455 COX6A2Q02221 97 aa5.65□□□□□ -1.51
USP47-203ENST00000399455 CELA1Q9UNI1 258 aa5.65□□□□□ -1.51
USP47-203ENST00000399455 SPTAN1Q13813 2472 aaKnown RBP5.65□□□□□ -1.51
USP47-203ENST00000399455 CSDC2Q9Y534 153 aaKnown RBP5.65□□□□□ -1.51
USP47-203ENST00000399455 Q6ZVQ6 151 aa5.64□□□□□ -1.51
USP47-203ENST00000399455 POLR2KP53803 58 aaKnown RBP5.64□□□□□ -1.51
USP47-203ENST00000399455 TEN1Q86WV5 123 aa5.64□□□□□ -1.51
USP47-203ENST00000399455 TANC2Q9HCD6 1990 aa5.64□□□□□ -1.51
USP47-203ENST00000399455 FXYD2P54710 66 aa5.64□□□□□ -1.51
USP47-203ENST00000399455 COL27A1Q8IZC6 1860 aaPredicted RBP5.64□□□□□ -1.51
USP47-203ENST00000399455 UNQ6190/PRO20217Q6UXQ8 127 aa5.64□□□□□ -1.51
USP47-203ENST00000399455 C11orf21Q9P2W6 132 aa5.64□□□□□ -1.51
USP47-203ENST00000399455 SERP1Q9Y6X1 66 aa5.64□□□□□ -1.51
USP47-203ENST00000399455 MRPS12O15235 138 aaKnown RBP5.63□□□□□ -1.51
USP47-203ENST00000399455 Q9BRP9 147 aa5.63□□□□□ -1.51
USP47-203ENST00000399455 SLPIP03973 132 aa5.63□□□□□ -1.51
USP47-203ENST00000399455 DOPEY2Q9Y3R5 2298 aa5.62□□□□□ -1.51
USP47-203ENST00000399455 RPL37AP61513 92 aaKnown RBP5.62□□□□□ -1.51
USP47-203ENST00000399455 CNFNQ9BYD5 112 aa5.62□□□□□ -1.51
USP47-203ENST00000399455 LINC00336Q6ZUF6 198 aa5.62□□□□□ -1.51
USP47-203ENST00000399455 CUL9Q8IWT3 2517 aa5.62□□□□□ -1.51
USP47-203ENST00000399455 Q6ZQY7 126 aa5.62□□□□□ -1.51
USP47-203ENST00000399455 NDUFV3P56181 108 aaKnown RBP5.61□□□□□ -1.51
USP47-203ENST00000399455 Q6ZRP5 223 aa5.61□□□□□ -1.51
USP47-203ENST00000399455 ANKHD1Q8IWZ3 2542 aaKnown RBP5.61□□□□□ -1.51
USP47-203ENST00000399455 J3KT08 172 aa5.61□□□□□ -1.51
USP47-203ENST00000399455 IGLV4-60A0A075B6I1 120 aa5.6□□□□□ -1.51
USP47-203ENST00000399455 ESRGQ1W209 222 aa5.6□□□□□ -1.51
USP47-203ENST00000399455 SMIM11BQ8TCY0 68 aa5.6□□□□□ -1.51
USP47-203ENST00000399455 PCSK5Q92824 1860 aa5.6□□□□□ -1.51
USP47-203ENST00000399455 LINC00315P59091 139 aa5.6□□□□□ -1.51
USP47-203ENST00000399455 TTTY13Q9BZ97 58 aa5.6□□□□□ -1.51
USP47-203ENST00000399455 C9orf116Q5BN46 136 aaPredicted RBP5.59□□□□□ -1.51
USP47-203ENST00000399455 TRBV10-3A0A0K0K1G6 114 aa5.59□□□□□ -1.51
USP47-203ENST00000399455 LINC00242Q5T6M2 205 aa5.59□□□□□ -1.51
USP47-203ENST00000399455 LINC00643Q86TS7 51 aa5.59□□□□□ -1.51
USP47-203ENST00000399455 B5MCH6 92 aa5.59□□□□□ -1.51
USP47-203ENST00000399455 IGHV6-1A0A0B4J1U7 121 aa5.58□□□□□ -1.52
USP47-203ENST00000399455 KIF25-AS1Q9Y6Z4 181 aa5.58□□□□□ -1.52
USP47-203ENST00000399455 C3orf22Q8N5N4 141 aa5.58□□□□□ -1.52
USP47-203ENST00000399455 FAM236AA0A1B0GUQ0 79 aa5.58□□□□□ -1.52
USP47-203ENST00000399455 FAM236BA0A1B0GV22 79 aa5.58□□□□□ -1.52
USP47-203ENST00000399455 A8MZ25 164 aa5.57□□□□□ -1.52
USP47-203ENST00000399455 NDUFC2O95298 119 aa5.57□□□□□ -1.52
USP47-203ENST00000399455 Q6ZRU5 148 aa5.57□□□□□ -1.52
USP47-203ENST00000399455 SCXQ7RTU7 201 aa5.57□□□□□ -1.52
USP47-203ENST00000399455 WFDC13Q8IUB5 93 aa5.57□□□□□ -1.52
USP47-203ENST00000399455 SMIM1B2RUZ4 78 aa5.57□□□□□ -1.52
USP47-203ENST00000399455 Q8N9L7 120 aa5.57□□□□□ -1.52
USP47-203ENST00000399455 C22orf24Q9Y442 160 aa5.57□□□□□ -1.52
USP47-203ENST00000399455 TYMSOSQ8TAI1 123 aa5.57□□□□□ -1.52
USP47-203ENST00000399455 TAX1BP3O14907 124 aa5.57□□□□□ -1.52
USP47-203ENST00000399455 TRIAP1O43715 76 aa5.57□□□□□ -1.52
USP47-203ENST00000399455 TP73-AS1Q9UF72 201 aa5.56□□□□□ -1.52
USP47-203ENST00000399455 LINC00694P0DN24 101 aa5.56□□□□□ -1.52
USP47-203ENST00000399455 CRYGAP11844 174 aa5.56□□□□□ -1.52
USP47-203ENST00000399455 COX8CQ7Z4L0 72 aa5.56□□□□□ -1.52
USP47-203ENST00000399455 FAM19A3Q7Z5A8 133 aa5.56□□□□□ -1.52
USP47-203ENST00000399455 IGIPA6NJ69 53 aa5.55□□□□□ -1.52
USP47-203ENST00000399455 K7EIL1 84 aa5.55□□□□□ -1.52
USP47-203ENST00000399455 ENHOQ6UWT2 76 aa5.55□□□□□ -1.52
USP47-203ENST00000399455 X6R8D5 127 aa5.55□□□□□ -1.52
USP47-203ENST00000399455 TTC28Q96AY4 2481 aa5.55□□□□□ -1.52
USP47-203ENST00000399455 Q6Q795 121 aa5.55□□□□□ -1.52
USP47-203ENST00000399455 C11orf72Q8NBR9 251 aa5.55□□□□□ -1.52
USP47-203ENST00000399455 LINC00588Q9Y4M8 146 aa5.54□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 191.9 ms