RNA–Protein interactions for RNA: ENST00000398258.7

CD47-203, Transcript of CD47 molecule, humanhuman

TSL 3

Gene CD47, Length 469 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD47-203ENST00000398258 TRANK1O15050 2925 aa0.36□□□□□ -2.35
CD47-203ENST00000398258 PCNTO95613 3336 aa0.36□□□□□ -2.35
CD47-203ENST00000398258 CDK5RAP2Q96SN8 1893 aa0.36□□□□□ -2.35
CD47-203ENST00000398258 PLXNA1Q9UIW2 1896 aa0.36□□□□□ -2.35
CD47-203ENST00000398258 TRAV12-2A0A075B6T6 113 aa0.36□□□□□ -2.35
CD47-203ENST00000398258 A0A087WTM6 91 aa0.36□□□□□ -2.35
CD47-203ENST00000398258 A0A096LNT2 108 aa0.36□□□□□ -2.35
CD47-203ENST00000398258 SPTY2D1-AS1A0A0U1RR47 76 aa0.36□□□□□ -2.35
CD47-203ENST00000398258 RBAKDNA6NC62 111 aa0.36□□□□□ -2.35
CD47-203ENST00000398258 C10orf142B7Z368 130 aa0.36□□□□□ -2.35
CD47-203ENST00000398258 HIST1H1DP16402 221 aaKnown RBP0.36□□□□□ -2.35
CD47-203ENST00000398258 CCL3L1P16619 93 aa0.36□□□□□ -2.35
CD47-203ENST00000398258 GUCA1AP43080 201 aaPredicted RBP0.36□□□□□ -2.35
CD47-203ENST00000398258 UBA52P62987 128 aaKnown RBP0.36□□□□□ -2.35
CD47-203ENST00000398258 DEFB133Q30KQ1 61 aa0.36□□□□□ -2.35
CD47-203ENST00000398258 Q5VSD8 79 aa0.36□□□□□ -2.35
CD47-203ENST00000398258 SLC48A1Q6P1K1 146 aa0.36□□□□□ -2.35
CD47-203ENST00000398258 COX7B2Q8TF08 81 aa0.36□□□□□ -2.35
CD47-203ENST00000398258 C10orf82Q8WW14 230 aa0.36□□□□□ -2.35
CD47-203ENST00000398258 SPTSSAQ969W0 71 aa0.36□□□□□ -2.35
CD47-203ENST00000398258 DYNLRB1Q9NP97 96 aa0.36□□□□□ -2.35
CD47-203ENST00000398258 PAIP2BQ9ULR5 123 aaKnown RBP0.36□□□□□ -2.35
CD47-203ENST00000398258 LAMA2P24043 3122 aaKnown RBP0.36□□□□□ -2.35
CD47-203ENST00000398258 GOLGB1Q14789 3259 aaKnown RBP0.36□□□□□ -2.35
CD47-203ENST00000398258 GVINP1Q7Z2Y8 2422 aa0.36□□□□□ -2.35
CD47-203ENST00000398258 PTPRZ1P23471 2315 aaPredicted RBP0.36□□□□□ -2.35
CD47-203ENST00000398258 CACNA1EQ15878 2313 aa0.36□□□□□ -2.35
CD47-203ENST00000398258 SPTAN1Q13813 2472 aaKnown RBP0.36□□□□□ -2.35
CD47-203ENST00000398258 NAV2Q8IVL1 2488 aa0.36□□□□□ -2.35
CD47-203ENST00000398258 FAM186AA6NE01 2351 aa0.35□□□□□ -2.35
CD47-203ENST00000398258 UBR5O95071 2799 aaPredicted RBP0.35□□□□□ -2.35
CD47-203ENST00000398258 ITPR1Q14643 2758 aa0.35□□□□□ -2.35
CD47-203ENST00000398258 TEX15Q9BXT5 2789 aa0.35□□□□□ -2.35
CD47-203ENST00000398258 ANK1P16157 1881 aa0.35□□□□□ -2.35
CD47-203ENST00000398258 LRRK2Q5S007 2527 aa0.35□□□□□ -2.35
CD47-203ENST00000398258 NF1P21359 2839 aa0.35□□□□□ -2.35
CD47-203ENST00000398258 APCP25054 2843 aa0.35□□□□□ -2.35
CD47-203ENST00000398258 SIPA1L3O60292 1781 aaPredicted RBP0.35□□□□□ -2.35
CD47-203ENST00000398258 CFAP46Q8IYW2 2715 aa0.35□□□□□ -2.35
CD47-203ENST00000398258 UNC80Q8N2C7 3258 aa0.35□□□□□ -2.35
CD47-203ENST00000398258 FAM25AB3EWG3 89 aa0.35□□□□□ -2.35
CD47-203ENST00000398258 FAM25CB3EWG5 89 aa0.35□□□□□ -2.35
CD47-203ENST00000398258 FAM25GB3EWG6 89 aa0.35□□□□□ -2.35
CD47-203ENST00000398258 F2Z2F3 143 aa0.35□□□□□ -2.35
CD47-203ENST00000398258 M0R2T5 61 aa0.35□□□□□ -2.35
CD47-203ENST00000398258 PRH1P02810 166 aa0.35□□□□□ -2.35
CD47-203ENST00000398258 PIPP12273 146 aaPredicted RBP0.35□□□□□ -2.35
CD47-203ENST00000398258 DCDP81605 110 aaKnown RBP0.35□□□□□ -2.35
CD47-203ENST00000398258 SSBP1Q04837 148 aaKnown RBP0.35□□□□□ -2.35
CD47-203ENST00000398258 TDRG1Q3Y452 100 aa0.35□□□□□ -2.35
CD47-203ENST00000398258 PDCD10Q9BUL8 212 aa0.35□□□□□ -2.35
CD47-203ENST00000398258 SEC11CQ9BY50 192 aa0.35□□□□□ -2.35
CD47-203ENST00000398258 TMEM191AQ9H0A3 160 aa0.35□□□□□ -2.35
CD47-203ENST00000398258 PLAC8Q9NZF1 115 aa0.35□□□□□ -2.35
CD47-203ENST00000398258 MAP2P11137 1827 aaKnown RBP0.35□□□□□ -2.35
CD47-203ENST00000398258 A0A0C4DFX4 3053 aa0.35□□□□□ -2.35
CD47-203ENST00000398258 USP9YO00507 2555 aaPredicted RBP0.35□□□□□ -2.35
CD47-203ENST00000398258 WDR87Q6ZQQ6 2873 aa0.35□□□□□ -2.35
CD47-203ENST00000398258 BPTFQ12830 3046 aa0.35□□□□□ -2.35
CD47-203ENST00000398258 MAP1BP46821 2468 aaKnown RBP0.35□□□□□ -2.35
CD47-203ENST00000398258 LAMB1P07942 1786 aa0.34□□□□□ -2.35
CD47-203ENST00000398258 PIEZO2Q9H5I5 2752 aa0.34□□□□□ -2.35
CD47-203ENST00000398258 ANKHD1Q8IWZ3 2542 aaKnown RBP0.34□□□□□ -2.35
CD47-203ENST00000398258 ITPR3Q14573 2671 aa0.34□□□□□ -2.35
CD47-203ENST00000398258 PATJQ8NI35 1801 aa0.34□□□□□ -2.35
CD47-203ENST00000398258 DOCK2Q92608 1830 aa0.34□□□□□ -2.35
CD47-203ENST00000398258 FRAS1Q86XX4 4008 aa0.34□□□□□ -2.35
CD47-203ENST00000398258 CEP250Q9BV73 2442 aa0.34□□□□□ -2.35
CD47-203ENST00000398258 STAB1Q9NY15 2570 aa0.34□□□□□ -2.35
CD47-203ENST00000398258 TRBV7-1A0A0A6YYK4 115 aa0.34□□□□□ -2.36
CD47-203ENST00000398258 LYNX1G3V0Z9 82 aa0.34□□□□□ -2.36
CD47-203ENST00000398258 K7EP13 123 aa0.34□□□□□ -2.36
CD47-203ENST00000398258 NDUFB6O95139 128 aa0.34□□□□□ -2.36
CD47-203ENST00000398258 ASIPP42127 132 aa0.34□□□□□ -2.36
CD47-203ENST00000398258 UBE2D1P51668 147 aa0.34□□□□□ -2.36
CD47-203ENST00000398258 CCL18P55774 89 aa0.34□□□□□ -2.36
CD47-203ENST00000398258 SELENOWP63302 87 aa0.34□□□□□ -2.36
CD47-203ENST00000398258 INSL4Q14641 139 aa0.34□□□□□ -2.36
CD47-203ENST00000398258 KRTAP21-1Q3LI58 79 aa0.34□□□□□ -2.36
CD47-203ENST00000398258 FAM74A4Q5TZK3 123 aa0.34□□□□□ -2.36
CD47-203ENST00000398258 ARL11Q969Q4 196 aa0.34□□□□□ -2.36
CD47-203ENST00000398258 COX14Q96I36 57 aa0.34□□□□□ -2.36
CD47-203ENST00000398258 LINC00470Q9BZP3 86 aa0.34□□□□□ -2.36
CD47-203ENST00000398258 TANC1Q9C0D5 1861 aa0.34□□□□□ -2.36
CD47-203ENST00000398258 BPESC1Q9GZL8 116 aa0.34□□□□□ -2.36
CD47-203ENST00000398258 CCDC167Q9P0B6 97 aa0.34□□□□□ -2.36
CD47-203ENST00000398258 V9GYV3 84 aa0.34□□□□□ -2.36
CD47-203ENST00000398258 UTRNP46939 3433 aa0.34□□□□□ -2.36
CD47-203ENST00000398258 NBEAL1Q6ZS30 2694 aa0.34□□□□□ -2.36
CD47-203ENST00000398258 TPRP12270 2363 aaKnown RBP0.34□□□□□ -2.36
CD47-203ENST00000398258 KIAA0100Q14667 2235 aaKnown RBP0.34□□□□□ -2.36
CD47-203ENST00000398258 LOC285556D6RIA3 1793 aa0.34□□□□□ -2.36
CD47-203ENST00000398258 MUC22E2RYF6 1773 aaPredicted RBP0.34□□□□□ -2.36
CD47-203ENST00000398258 EYSQ5T1H1 3165 aa0.34□□□□□ -2.36
CD47-203ENST00000398258 C5orf42Q9H799 3197 aa0.34□□□□□ -2.36
CD47-203ENST00000398258 SPTBN5Q9NRC6 3674 aaKnown RBP0.34□□□□□ -2.36
CD47-203ENST00000398258 TENM4Q6N022 2769 aa0.34□□□□□ -2.36
CD47-203ENST00000398258 PARP14Q460N5 1801 aa0.34□□□□□ -2.36
CD47-203ENST00000398258 VCANP13611 3396 aa0.33□□□□□ -2.36
CD47-203ENST00000398258 MYO7AQ13402 2215 aa0.33□□□□□ -2.36
Retrieved 100 of 20,778 RNA–protein pairs in 100.7 ms