RNA–Protein interactions for RNA: ENST00000397442.5

CPNE1-203, Transcript of copine 1, humanhuman

TSL 5 BASIC

Gene CPNE1, Length 1,695 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-203ENST00000397442 TMEM223A0PJW6 202 aa18.54■□□□□ 0.56
CPNE1-203ENST00000397442 UBE2WQ96B02 151 aa18.53■□□□□ 0.56
CPNE1-203ENST00000397442 IGKV2D-26A0A0A0MRZ7 120 aa18.52■□□□□ 0.56
CPNE1-203ENST00000397442 IGHV3OR16-9A0A0B4J2B5 98 aa18.52■□□□□ 0.56
CPNE1-203ENST00000397442 IGLV10-54A0A075B6I4 117 aa18.51■□□□□ 0.55
CPNE1-203ENST00000397442 XCL1P47992 114 aa18.51■□□□□ 0.55
CPNE1-203ENST00000397442 CHCHD10Q8WYQ3 142 aaPredicted RBP18.51■□□□□ 0.55
CPNE1-203ENST00000397442 CRPP02741 224 aa18.5■□□□□ 0.55
CPNE1-203ENST00000397442 E9PLD3 99 aa18.49■□□□□ 0.55
CPNE1-203ENST00000397442 MIAQ16674 131 aa18.48■□□□□ 0.55
CPNE1-203ENST00000397442 PRO1933Q9H354 126 aa18.48■□□□□ 0.55
CPNE1-203ENST00000397442 CASC10Q5T4H9 136 aa18.47■□□□□ 0.55
CPNE1-203ENST00000397442 IBA57-AS1B1ANH7 110 aa18.47■□□□□ 0.55
CPNE1-203ENST00000397442 SPINK8P0C7L1 97 aa18.47■□□□□ 0.55
CPNE1-203ENST00000397442 CD164L2Q6UWJ8 174 aa18.47■□□□□ 0.55
CPNE1-203ENST00000397442 TRAV8-3A0A0A6YYJ7 113 aa18.46■□□□□ 0.55
CPNE1-203ENST00000397442 TRAV8-4A0A0B4J246 113 aa18.46■□□□□ 0.55
CPNE1-203ENST00000397442 H3BRM9 83 aa18.46■□□□□ 0.55
CPNE1-203ENST00000397442 HERVK_113P61574 105 aa18.46■□□□□ 0.55
CPNE1-203ENST00000397442 DNAH1Q9P2D7 4330 aa18.46■□□□□ 0.55
CPNE1-203ENST00000397442 C14orf144Q96I85 54 aa18.45■□□□□ 0.54
CPNE1-203ENST00000397442 IGHV3-64A0A075B6Q5 118 aa18.44■□□□□ 0.54
CPNE1-203ENST00000397442 A0A087WZ39 114 aa18.44■□□□□ 0.54
CPNE1-203ENST00000397442 SMIM1B2RUZ4 78 aa18.44■□□□□ 0.54
CPNE1-203ENST00000397442 NMUP48645 174 aa18.44■□□□□ 0.54
CPNE1-203ENST00000397442 FOXI1Q12951 378 aa18.44■□□□□ 0.54
CPNE1-203ENST00000397442 KRTAP26-1Q6PEX3 210 aa18.44■□□□□ 0.54
CPNE1-203ENST00000397442 C5orf38Q86SI9 138 aa18.44■□□□□ 0.54
CPNE1-203ENST00000397442 C10orf126Q8N4M7 172 aa18.44■□□□□ 0.54
CPNE1-203ENST00000397442 KRTAP1-5Q9BYS1 174 aa18.44■□□□□ 0.54
CPNE1-203ENST00000397442 PCP2Q8IVA1 136 aa18.43■□□□□ 0.54
CPNE1-203ENST00000397442 IGHV1-58A0A0C4DH39 117 aa18.42■□□□□ 0.54
CPNE1-203ENST00000397442 IGLV5-39A0A0G2JS06 123 aa18.42■□□□□ 0.54
CPNE1-203ENST00000397442 C3orf84H3BNL1 204 aa18.42■□□□□ 0.54
CPNE1-203ENST00000397442 K7EP13 123 aa18.42■□□□□ 0.54
CPNE1-203ENST00000397442 TSPEAR-AS2P59090 65 aa18.42■□□□□ 0.54
CPNE1-203ENST00000397442 TTTY13Q9BZ97 58 aa18.42■□□□□ 0.54
CPNE1-203ENST00000397442 GAGE12HA6NDE8 117 aa18.41■□□□□ 0.54
CPNE1-203ENST00000397442 TP73-AS1Q9UF72 201 aa18.41■□□□□ 0.54
CPNE1-203ENST00000397442 VPS13DQ5THJ4 4388 aa18.41■□□□□ 0.54
CPNE1-203ENST00000397442 LEPROTO15243 131 aa18.41■□□□□ 0.54
CPNE1-203ENST00000397442 COX8AP10176 69 aa18.41■□□□□ 0.54
CPNE1-203ENST00000397442 Q9HAA7 133 aa18.39■□□□□ 0.53
CPNE1-203ENST00000397442 TSTD3H0UI37 97 aa18.38■□□□□ 0.53
CPNE1-203ENST00000397442 COX7A2LO14548 114 aa18.38■□□□□ 0.53
CPNE1-203ENST00000397442 J3QQQ9 107 aa18.37■□□□□ 0.53
CPNE1-203ENST00000397442 MAPKAPK5-AS1Q8N8E1 139 aa18.37■□□□□ 0.53
CPNE1-203ENST00000397442 C1orf43Q9BWL3 253 aa18.37■□□□□ 0.53
CPNE1-203ENST00000397442 BOD1L2Q8IYS8 172 aa18.36■□□□□ 0.53
CPNE1-203ENST00000397442 LINC01561Q8N1V8 128 aa18.36■□□□□ 0.53
CPNE1-203ENST00000397442 PLEKHB2Q96CS7 222 aa18.36■□□□□ 0.53
CPNE1-203ENST00000397442 IGKV2D-24A0A075B6R9 120 aa18.34■□□□□ 0.53
CPNE1-203ENST00000397442 SLC25A34Q6PIV7 304 aa18.34■□□□□ 0.53
CPNE1-203ENST00000397442 UQCR10Q9UDW1 63 aa18.34■□□□□ 0.53
CPNE1-203ENST00000397442 NBDYA0A0U1RRE5 68 aa18.33■□□□□ 0.52
CPNE1-203ENST00000397442 MIEN1Q9BRT3 115 aa18.33■□□□□ 0.52
CPNE1-203ENST00000397442 DLEU1O43261 78 aa18.32■□□□□ 0.52
CPNE1-203ENST00000397442 LGALS3P17931 250 aaKnown RBP18.31■□□□□ 0.52
CPNE1-203ENST00000397442 MALP21145 153 aa18.29■□□□□ 0.52
CPNE1-203ENST00000397442 TTC32Q5I0X7 151 aa18.29■□□□□ 0.52
CPNE1-203ENST00000397442 MYMXA0A1B0GTQ4 84 aa18.28■□□□□ 0.52
CPNE1-203ENST00000397442 ZNF815PA8K554 130 aa18.28■□□□□ 0.52
CPNE1-203ENST00000397442 COX7B2Q8TF08 81 aa18.28■□□□□ 0.52
CPNE1-203ENST00000397442 LINC00476Q8WZB0 136 aa18.28■□□□□ 0.52
CPNE1-203ENST00000397442 RMI2Q96E14 147 aa18.27■□□□□ 0.52
CPNE1-203ENST00000397442 TOMM7Q9P0U1 55 aa18.26■□□□□ 0.51
CPNE1-203ENST00000397442 PCP4L1A6NKN8 68 aa18.25■□□□□ 0.51
CPNE1-203ENST00000397442 ORAOV1Q8WV07 137 aa18.25■□□□□ 0.51
CPNE1-203ENST00000397442 NDUFA12Q9UI09 145 aa18.25■□□□□ 0.51
CPNE1-203ENST00000397442 KIAA0087Q14695 138 aa18.25■□□□□ 0.51
CPNE1-203ENST00000397442 C2orf91Q6ZV80 131 aa18.25■□□□□ 0.51
CPNE1-203ENST00000397442 LY6G6CO95867 125 aa18.24■□□□□ 0.51
CPNE1-203ENST00000397442 DDTP30046 118 aa18.24■□□□□ 0.51
CPNE1-203ENST00000397442 Q8IZM0 81 aa18.24■□□□□ 0.51
CPNE1-203ENST00000397442 APOMO95445 188 aa18.23■□□□□ 0.51
CPNE1-203ENST00000397442 ZNF625Q96I27 306 aaPredicted RBP18.23■□□□□ 0.51
CPNE1-203ENST00000397442 NDUFA1O15239 70 aa18.22■□□□□ 0.51
CPNE1-203ENST00000397442 C15orf56Q8N910 161 aa18.22■□□□□ 0.51
CPNE1-203ENST00000397442 COX11Q9Y6N1 276 aa18.21■□□□□ 0.51
CPNE1-203ENST00000397442 M0R2N4 97 aa18.2■□□□□ 0.5
CPNE1-203ENST00000397442 Q6ZR54 194 aa18.2■□□□□ 0.5
CPNE1-203ENST00000397442 ALMS1Q8TCU4 4167 aa18.19■□□□□ 0.5
CPNE1-203ENST00000397442 HNRNPA3P51991 378 aaKnown RBP18.18■□□□□ 0.5
CPNE1-203ENST00000397442 C6orf226Q5I0X4 101 aa18.18■□□□□ 0.5
CPNE1-203ENST00000397442 PRSS2P07478 247 aa18.18■□□□□ 0.5
CPNE1-203ENST00000397442 TM2D2Q9BX73 214 aa18.18■□□□□ 0.5
CPNE1-203ENST00000397442 KMT2AQ03164 3969 aa18.17■□□□□ 0.5
CPNE1-203ENST00000397442 SPAG11BQ08648 103 aa18.17■□□□□ 0.5
CPNE1-203ENST00000397442 A0A0J9YXY3 114 aa18.16■□□□□ 0.5
CPNE1-203ENST00000397442 C2orf82Q6UX34 121 aa18.15■□□□□ 0.5
CPNE1-203ENST00000397442 SCGB1D4Q6XE38 83 aa18.15■□□□□ 0.5
CPNE1-203ENST00000397442 LINC00526Q96FQ7 95 aa18.15■□□□□ 0.5
CPNE1-203ENST00000397442 HIGD1BQ9P298 99 aa18.15■□□□□ 0.5
CPNE1-203ENST00000397442 Q6ZRN7 208 aaPredicted RBP18.15■□□□□ 0.5
CPNE1-203ENST00000397442 C6orf223Q8N319 242 aa18.15■□□□□ 0.5
CPNE1-203ENST00000397442 DNAH10Q8IVF4 4471 aa18.13■□□□□ 0.49
CPNE1-203ENST00000397442 HIGD2BQ4VC39 106 aa18.13■□□□□ 0.49
CPNE1-203ENST00000397442 CFAP161Q6P656 301 aa18.13■□□□□ 0.49
CPNE1-203ENST00000397442 GVQW2A0A096LPI5 108 aaPredicted RBP18.12■□□□□ 0.49
CPNE1-203ENST00000397442 USP17L23D6RBM5 183 aa18.12■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 72.7 ms