RNA–Protein interactions for RNA: ENST00000397411.6

TSPAN4-207, Transcript of tetraspanin 4, humanhuman

APPRIS P1 TSL 2 BASIC

Gene TSPAN4, Length 1,025 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-207ENST00000397411 ZC2HC1BQ5TFG8 222 aa16.39■□□□□ 0.21
TSPAN4-207ENST00000397411 LINC00526Q96FQ7 95 aa16.39■□□□□ 0.21
TSPAN4-207ENST00000397411 RYR1P21817 5038 aa16.38■□□□□ 0.21
TSPAN4-207ENST00000397411 Q8N1X5 172 aa16.38■□□□□ 0.21
TSPAN4-207ENST00000397411 AMELXQ99217 191 aa16.38■□□□□ 0.21
TSPAN4-207ENST00000397411 SMR3BP02814 79 aaPredicted RBP16.37■□□□□ 0.21
TSPAN4-207ENST00000397411 Q6ZSA8 131 aa16.37■□□□□ 0.21
TSPAN4-207ENST00000397411 HERC2O95714 4834 aa16.37■□□□□ 0.21
TSPAN4-207ENST00000397411 IGHV3OR16-9A0A0B4J2B5 98 aa16.36■□□□□ 0.21
TSPAN4-207ENST00000397411 UBE2D1P51668 147 aa16.36■□□□□ 0.21
TSPAN4-207ENST00000397411 LINC00242Q5T6M2 205 aa16.36■□□□□ 0.21
TSPAN4-207ENST00000397411 DPH3Q96FX2 82 aa16.36■□□□□ 0.21
TSPAN4-207ENST00000397411 SDIM1Q6ZPB5 146 aa16.35■□□□□ 0.21
TSPAN4-207ENST00000397411 IGLV4-69A0A075B6H9 119 aa16.34■□□□□ 0.21
TSPAN4-207ENST00000397411 SYCNQ0VAF6 134 aa16.34■□□□□ 0.21
TSPAN4-207ENST00000397411 LINC00173Q6ZV60 143 aa16.34■□□□□ 0.21
TSPAN4-207ENST00000397411 CHAC1Q9BUX1 264 aa16.34■□□□□ 0.21
TSPAN4-207ENST00000397411 APOBP04114 4563 aaKnown RBP16.33■□□□□ 0.21
TSPAN4-207ENST00000397411 COX6A2Q02221 97 aa16.33■□□□□ 0.2
TSPAN4-207ENST00000397411 ORAOV1Q8WV07 137 aa16.33■□□□□ 0.2
TSPAN4-207ENST00000397411 CARD19Q96LW7 228 aa16.33■□□□□ 0.2
TSPAN4-207ENST00000397411 SEC11AP67812 179 aa16.32■□□□□ 0.2
TSPAN4-207ENST00000397411 SPAG11BQ08648 103 aa16.32■□□□□ 0.2
TSPAN4-207ENST00000397411 CAMK2N2Q96S95 79 aa16.32■□□□□ 0.2
TSPAN4-207ENST00000397411 EPM2AB3EWF7 344 aa16.31■□□□□ 0.2
TSPAN4-207ENST00000397411 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP16.31■□□□□ 0.2
TSPAN4-207ENST00000397411 SCXQ7RTU7 201 aa16.31■□□□□ 0.2
TSPAN4-207ENST00000397411 OR10D4PQ8NGN7 298 aa16.31■□□□□ 0.2
TSPAN4-207ENST00000397411 URB1-AS1Q96HZ7 61 aa16.31■□□□□ 0.2
TSPAN4-207ENST00000397411 GEMIN7Q9H840 131 aaKnown RBP16.31■□□□□ 0.2
TSPAN4-207ENST00000397411 FAM229AH3BQW9 127 aa16.3■□□□□ 0.2
TSPAN4-207ENST00000397411 HSPG2P98160 4391 aa16.29■□□□□ 0.2
TSPAN4-207ENST00000397411 A0A087WZ39 114 aa16.29■□□□□ 0.2
TSPAN4-207ENST00000397411 HBDP02042 147 aa16.29■□□□□ 0.2
TSPAN4-207ENST00000397411 TRGC2P03986 189 aa16.29■□□□□ 0.2
TSPAN4-207ENST00000397411 C2orf48Q96LS8 159 aa16.29■□□□□ 0.2
TSPAN4-207ENST00000397411 PKIGQ9Y2B9 76 aa16.29■□□□□ 0.2
TSPAN4-207ENST00000397411 HERVK_113P63121 156 aa16.28■□□□□ 0.2
TSPAN4-207ENST00000397411 PMCHL1Q16048 86 aa16.28■□□□□ 0.2
TSPAN4-207ENST00000397411 BAGE3Q86Y29 109 aa16.28■□□□□ 0.2
TSPAN4-207ENST00000397411 NDUFA6P56556 154 aa16.27■□□□□ 0.2
TSPAN4-207ENST00000397411 CIRBP-AS1Q8TBR5 109 aa16.27■□□□□ 0.2
TSPAN4-207ENST00000397411 KRTAP17-1Q9BYP8 105 aa16.27■□□□□ 0.2
TSPAN4-207ENST00000397411 A0A0J9YXV3 536 aa16.26■□□□□ 0.19
TSPAN4-207ENST00000397411 COLCA2A8K830 154 aa16.26■□□□□ 0.19
TSPAN4-207ENST00000397411 PMVKQ15126 192 aa16.26■□□□□ 0.19
TSPAN4-207ENST00000397411 CST9LQ9H4G1 147 aa16.26■□□□□ 0.19
TSPAN4-207ENST00000397411 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP16.26■□□□□ 0.19
TSPAN4-207ENST00000397411 Q6ZRU5 148 aa16.25■□□□□ 0.19
TSPAN4-207ENST00000397411 FAM19A3Q7Z5A8 133 aa16.25■□□□□ 0.19
TSPAN4-207ENST00000397411 LINC01561Q8N1V8 128 aa16.25■□□□□ 0.19
TSPAN4-207ENST00000397411 CHCHD1Q96BP2 118 aaKnown RBP16.25■□□□□ 0.19
TSPAN4-207ENST00000397411 PACRGQ96M98 296 aaPredicted RBP16.24■□□□□ 0.19
TSPAN4-207ENST00000397411 KRTAP4-5Q9BYR2 181 aa16.24■□□□□ 0.19
TSPAN4-207ENST00000397411 IGKV2-24A0A0C4DH68 120 aa16.23■□□□□ 0.19
TSPAN4-207ENST00000397411 F8WDY8 70 aa16.23■□□□□ 0.19
TSPAN4-207ENST00000397411 SCO1O75880 301 aa16.23■□□□□ 0.19
TSPAN4-207ENST00000397411 ATP5LO75964 103 aa16.23■□□□□ 0.19
TSPAN4-207ENST00000397411 CHTF8P0CG12 524 aa16.23■□□□□ 0.19
TSPAN4-207ENST00000397411 S100A1P23297 94 aa16.23■□□□□ 0.19
TSPAN4-207ENST00000397411 Q5VSD8 79 aa16.23■□□□□ 0.19
TSPAN4-207ENST00000397411 DNAH8Q96JB1 4490 aa16.23■□□□□ 0.19
TSPAN4-207ENST00000397411 A0A096LNJ9 63 aa16.22■□□□□ 0.19
TSPAN4-207ENST00000397411 PRSS2P07478 247 aa16.22■□□□□ 0.19
TSPAN4-207ENST00000397411 PANO1I0J062 215 aa16.21■□□□□ 0.19
TSPAN4-207ENST00000397411 NDUFA1O15239 70 aa16.21■□□□□ 0.19
TSPAN4-207ENST00000397411 MAJINQ3KP22 176 aa16.21■□□□□ 0.19
TSPAN4-207ENST00000397411 LINC00469Q8N7U9 141 aa16.21■□□□□ 0.19
TSPAN4-207ENST00000397411 TINCRA0A1B0GVN0 87 aa16.2■□□□□ 0.18
TSPAN4-207ENST00000397411 PDZD11Q5EBL8 140 aa16.2■□□□□ 0.18
TSPAN4-207ENST00000397411 LINC00528Q8N1L1 170 aa16.2■□□□□ 0.18
TSPAN4-207ENST00000397411 TOMM7Q9P0U1 55 aa16.2■□□□□ 0.18
TSPAN4-207ENST00000397411 CDKN2A-AS1Q9UH64 79 aa16.2■□□□□ 0.18
TSPAN4-207ENST00000397411 LOC107984640A0A0U1RRK4 108 aa16.19■□□□□ 0.18
TSPAN4-207ENST00000397411 HSBP1O75506 76 aa16.19■□□□□ 0.18
TSPAN4-207ENST00000397411 LINC00474Q9P2X8 69 aa16.18■□□□□ 0.18
TSPAN4-207ENST00000397411 GAGE2BQ13066 116 aa16.17■□□□□ 0.18
TSPAN4-207ENST00000397411 CIRBPQ14011 172 aaKnown RBP16.17■□□□□ 0.18
TSPAN4-207ENST00000397411 RNF151Q2KHN1 245 aa16.17■□□□□ 0.18
TSPAN4-207ENST00000397411 C6orf226Q5I0X4 101 aa16.17■□□□□ 0.18
TSPAN4-207ENST00000397411 SPACA4Q8TDM5 124 aa16.17■□□□□ 0.18
TSPAN4-207ENST00000397411 A0A096LNI7 61 aa16.16■□□□□ 0.18
TSPAN4-207ENST00000397411 PLA2G1BP04054 148 aaKnown RBP16.16■□□□□ 0.18
TSPAN4-207ENST00000397411 UNQ6190/PRO20217Q6UXQ8 127 aa16.16■□□□□ 0.18
TSPAN4-207ENST00000397411 MRPL35Q9NZE8 188 aaKnown RBP16.16■□□□□ 0.18
TSPAN4-207ENST00000397411 A0A087WYN8 130 aa16.15■□□□□ 0.18
TSPAN4-207ENST00000397411 CKS1BP61024 79 aa16.15■□□□□ 0.18
TSPAN4-207ENST00000397411 KIAA0087Q14695 138 aa16.15■□□□□ 0.18
TSPAN4-207ENST00000397411 H3BRM9 83 aa16.13■□□□□ 0.17
TSPAN4-207ENST00000397411 RPL18AQ02543 176 aaKnown RBP16.13■□□□□ 0.17
TSPAN4-207ENST00000397411 FAM19A2Q8N3H0 131 aa16.13■□□□□ 0.17
TSPAN4-207ENST00000397411 STPG4Q8N801 248 aa16.13■□□□□ 0.17
TSPAN4-207ENST00000397411 C10orf25Q5T742 122 aa16.12■□□□□ 0.17
TSPAN4-207ENST00000397411 ATP6V1G1O75348 118 aa16.11■□□□□ 0.17
TSPAN4-207ENST00000397411 SERF1AO75920 110 aa16.11■□□□□ 0.17
TSPAN4-207ENST00000397411 C2orf82Q6UX34 121 aa16.11■□□□□ 0.17
TSPAN4-207ENST00000397411 Q8IZM0 81 aa16.11■□□□□ 0.17
TSPAN4-207ENST00000397411 IFI27L1Q96BM0 104 aa16.11■□□□□ 0.17
TSPAN4-207ENST00000397411 IGLV5-45A0A087WSX0 123 aa16.1■□□□□ 0.17
TSPAN4-207ENST00000397411 PTTG1IPP53801 180 aa16.1■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms