RNA–Protein interactions for RNA: ENST00000397406.5

TSPAN4-205, Transcript of tetraspanin 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSPAN4, Length 1,426 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-205ENST00000397406 CRPP02741 224 aa11.38□□□□□ -0.59
TSPAN4-205ENST00000397406 COX6A2Q02221 97 aa11.38□□□□□ -0.59
TSPAN4-205ENST00000397406 SS18Q15532 418 aa11.38□□□□□ -0.59
TSPAN4-205ENST00000397406 UBE2WQ96B02 151 aa11.38□□□□□ -0.59
TSPAN4-205ENST00000397406 HECTD4Q9Y4D8 3996 aa11.38□□□□□ -0.59
TSPAN4-205ENST00000397406 K7EP13 123 aa11.37□□□□□ -0.59
TSPAN4-205ENST00000397406 ZNF22P17026 224 aaPredicted RBP11.37□□□□□ -0.59
TSPAN4-205ENST00000397406 SEC11AP67812 179 aa11.37□□□□□ -0.59
TSPAN4-205ENST00000397406 C10orf126Q8N4M7 172 aa11.37□□□□□ -0.59
TSPAN4-205ENST00000397406 IGLV5-45A0A087WSX0 123 aa11.36□□□□□ -0.59
TSPAN4-205ENST00000397406 TRAV9-2A0A087WT02 112 aa11.36□□□□□ -0.59
TSPAN4-205ENST00000397406 HERVK_113P63121 156 aa11.36□□□□□ -0.59
TSPAN4-205ENST00000397406 MIAQ16674 131 aa11.36□□□□□ -0.59
TSPAN4-205ENST00000397406 KRTAP1-5Q9BYS1 174 aa11.36□□□□□ -0.59
TSPAN4-205ENST00000397406 GEMIN7Q9H840 131 aaKnown RBP11.36□□□□□ -0.59
TSPAN4-205ENST00000397406 IGLV10-54A0A075B6I4 117 aa11.35□□□□□ -0.59
TSPAN4-205ENST00000397406 CHCHD10Q8WYQ3 142 aaPredicted RBP11.35□□□□□ -0.59
TSPAN4-205ENST00000397406 TRAV8-4A0A0B4J246 113 aa11.35□□□□□ -0.59
TSPAN4-205ENST00000397406 MAJINQ3KP22 176 aa11.35□□□□□ -0.59
TSPAN4-205ENST00000397406 CDKN2A-AS1Q9UH64 79 aa11.35□□□□□ -0.59
TSPAN4-205ENST00000397406 DNAH17Q9UFH2 4485 aa11.34□□□□□ -0.59
TSPAN4-205ENST00000397406 IGHV3OR16-9A0A0B4J2B5 98 aa11.34□□□□□ -0.59
TSPAN4-205ENST00000397406 hDV102S1A0JD36 115 aa11.34□□□□□ -0.59
TSPAN4-205ENST00000397406 XCL1P47992 114 aa11.34□□□□□ -0.59
TSPAN4-205ENST00000397406 TMEM170BQ5T4T1 132 aa11.34□□□□□ -0.59
TSPAN4-205ENST00000397406 LINC00469Q8N7U9 141 aa11.34□□□□□ -0.59
TSPAN4-205ENST00000397406 HERC2O95714 4834 aa11.33□□□□□ -0.6
TSPAN4-205ENST00000397406 KRTAP26-1Q6PEX3 210 aa11.33□□□□□ -0.6
TSPAN4-205ENST00000397406 CD164L2Q6UWJ8 174 aa11.33□□□□□ -0.6
TSPAN4-205ENST00000397406 STPG4Q8N801 248 aa11.33□□□□□ -0.6
TSPAN4-205ENST00000397406 TRAV8-3A0A0A6YYJ7 113 aa11.32□□□□□ -0.6
TSPAN4-205ENST00000397406 NBDYA0A0U1RRE5 68 aa11.32□□□□□ -0.6
TSPAN4-205ENST00000397406 TMEM223A0PJW6 202 aa11.31□□□□□ -0.6
TSPAN4-205ENST00000397406 FOXI1Q12951 378 aa11.31□□□□□ -0.6
TSPAN4-205ENST00000397406 TTC32Q5I0X7 151 aa11.31□□□□□ -0.6
TSPAN4-205ENST00000397406 LINC00518Q8N0U6 118 aa11.31□□□□□ -0.6
TSPAN4-205ENST00000397406 Q9HAA7 133 aa11.31□□□□□ -0.6
TSPAN4-205ENST00000397406 GAGE12HA6NDE8 117 aa11.3□□□□□ -0.6
TSPAN4-205ENST00000397406 ANKRD39Q53RE8 183 aa11.3□□□□□ -0.6
TSPAN4-205ENST00000397406 C12orf57Q99622 126 aa11.3□□□□□ -0.6
TSPAN4-205ENST00000397406 VAMP8Q9BV40 100 aa11.3□□□□□ -0.6
TSPAN4-205ENST00000397406 C1orf43Q9BWL3 253 aa11.3□□□□□ -0.6
TSPAN4-205ENST00000397406 A0A087WZ39 114 aa11.29□□□□□ -0.6
TSPAN4-205ENST00000397406 H3BRM9 83 aa11.29□□□□□ -0.6
TSPAN4-205ENST00000397406 C5orf38Q86SI9 138 aa11.29□□□□□ -0.6
TSPAN4-205ENST00000397406 IGKV2D-24A0A075B6R9 120 aa11.28□□□□□ -0.6
TSPAN4-205ENST00000397406 PAM16Q9Y3D7 125 aa11.28□□□□□ -0.6
TSPAN4-205ENST00000397406 KIAA1109Q2LD37 5005 aa11.28□□□□□ -0.6
TSPAN4-205ENST00000397406 SMIM1B2RUZ4 78 aa11.27□□□□□ -0.6
TSPAN4-205ENST00000397406 HSBP1L1C9JCN9 74 aa11.27□□□□□ -0.6
TSPAN4-205ENST00000397406 SPINK8P0C7L1 97 aa11.27□□□□□ -0.6
TSPAN4-205ENST00000397406 IGKV2D-26A0A0A0MRZ7 120 aa11.26□□□□□ -0.61
TSPAN4-205ENST00000397406 A0A1B0GVY2 172 aa11.26□□□□□ -0.61
TSPAN4-205ENST00000397406 E9PLD3 99 aa11.26□□□□□ -0.61
TSPAN4-205ENST00000397406 COX7A2LO14548 114 aa11.26□□□□□ -0.61
TSPAN4-205ENST00000397406 RTL8CO15255 209 aa11.26□□□□□ -0.61
TSPAN4-205ENST00000397406 HERVK_113P61574 105 aa11.26□□□□□ -0.61
TSPAN4-205ENST00000397406 SPATA45Q537H7 98 aa11.26□□□□□ -0.61
TSPAN4-205ENST00000397406 Q6ZR54 194 aa11.26□□□□□ -0.61
TSPAN4-205ENST00000397406 LINC01561Q8N1V8 128 aa11.26□□□□□ -0.61
TSPAN4-205ENST00000397406 RMI2Q96E14 147 aa11.26□□□□□ -0.61
TSPAN4-205ENST00000397406 IGLV5-39A0A0G2JS06 123 aa11.26□□□□□ -0.61
TSPAN4-205ENST00000397406 M0R2N4 97 aa11.26□□□□□ -0.61
TSPAN4-205ENST00000397406 S100A12P80511 92 aa11.26□□□□□ -0.61
TSPAN4-205ENST00000397406 IGHV3-64A0A075B6Q5 118 aa11.25□□□□□ -0.61
TSPAN4-205ENST00000397406 IGHV1-58A0A0C4DH39 117 aa11.25□□□□□ -0.61
TSPAN4-205ENST00000397406 LEPROTO15243 131 aa11.24□□□□□ -0.61
TSPAN4-205ENST00000397406 DYNC1H1Q14204 4646 aaKnown RBP11.24□□□□□ -0.61
TSPAN4-205ENST00000397406 PKD1P98161 4303 aa11.24□□□□□ -0.61
TSPAN4-205ENST00000397406 TSPEAR-AS2P59090 65 aa11.23□□□□□ -0.61
TSPAN4-205ENST00000397406 COX11Q9Y6N1 276 aa11.23□□□□□ -0.61
TSPAN4-205ENST00000397406 PKHD1P08F94 4074 aa11.23□□□□□ -0.61
TSPAN4-205ENST00000397406 MAPKAPK5-AS1Q8N8E1 139 aa11.22□□□□□ -0.61
TSPAN4-205ENST00000397406 KRTAP17-1Q9BYP8 105 aa11.22□□□□□ -0.61
TSPAN4-205ENST00000397406 MALP21145 153 aa11.21□□□□□ -0.61
TSPAN4-205ENST00000397406 NMUP48645 174 aa11.21□□□□□ -0.61
TSPAN4-205ENST00000397406 PLEKHB2Q96CS7 222 aa11.21□□□□□ -0.61
TSPAN4-205ENST00000397406 TM2D2Q9BX73 214 aa11.21□□□□□ -0.61
TSPAN4-205ENST00000397406 DNAH11Q96DT5 4516 aa11.21□□□□□ -0.62
TSPAN4-205ENST00000397406 J3QQQ9 107 aa11.2□□□□□ -0.62
TSPAN4-205ENST00000397406 Q6ZRN7 208 aaPredicted RBP11.2□□□□□ -0.62
TSPAN4-205ENST00000397406 APOMO95445 188 aa11.19□□□□□ -0.62
TSPAN4-205ENST00000397406 C15orf56Q8N910 161 aa11.19□□□□□ -0.62
TSPAN4-205ENST00000397406 ORAOV1Q8WV07 137 aa11.19□□□□□ -0.62
TSPAN4-205ENST00000397406 TTTY13Q9BZ97 58 aa11.19□□□□□ -0.62
TSPAN4-205ENST00000397406 PCP2Q8IVA1 136 aa11.18□□□□□ -0.62
TSPAN4-205ENST00000397406 COX7B2Q8TF08 81 aa11.18□□□□□ -0.62
TSPAN4-205ENST00000397406 COX8AP10176 69 aa11.18□□□□□ -0.62
TSPAN4-205ENST00000397406 KIAA0087Q14695 138 aa11.18□□□□□ -0.62
TSPAN4-205ENST00000397406 LINC00336Q6ZUF6 198 aa11.18□□□□□ -0.62
TSPAN4-205ENST00000397406 Q8IZM0 81 aa11.18□□□□□ -0.62
TSPAN4-205ENST00000397406 C14orf144Q96I85 54 aa11.18□□□□□ -0.62
TSPAN4-205ENST00000397406 LGALS3P17931 250 aaKnown RBP11.17□□□□□ -0.62
TSPAN4-205ENST00000397406 C6orf223Q8N319 242 aa11.17□□□□□ -0.62
TSPAN4-205ENST00000397406 TOMM7Q9P0U1 55 aa11.17□□□□□ -0.62
TSPAN4-205ENST00000397406 BOD1L2Q8IYS8 172 aa11.16□□□□□ -0.62
TSPAN4-205ENST00000397406 PRO1933Q9H354 126 aa11.16□□□□□ -0.62
TSPAN4-205ENST00000397406 TP73-AS1Q9UF72 201 aa11.16□□□□□ -0.62
TSPAN4-205ENST00000397406 PSCAO43653 123 aa11.15□□□□□ -0.62
TSPAN4-205ENST00000397406 SPAG11BQ08648 103 aa11.15□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 65.4 ms