RNA–Protein interactions for RNA: ENST00000397099.1

SEC13-204, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 4

Gene SEC13, Length 555 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-204ENST00000397099 IGLV4-69A0A075B6H9 119 aa8.86□□□□□ -0.99
SEC13-204ENST00000397099 IFITM10A6NMD0 228 aa8.86□□□□□ -0.99
SEC13-204ENST00000397099 PANO1I0J062 215 aa8.86□□□□□ -0.99
SEC13-204ENST00000397099 OXTP01178 125 aa8.86□□□□□ -0.99
SEC13-204ENST00000397099 COX19Q49B96 90 aa8.86□□□□□ -0.99
SEC13-204ENST00000397099 RNASE13Q5GAN3 156 aaKnown RBP8.86□□□□□ -0.99
SEC13-204ENST00000397099 PRSS3P2Q8NHM4 247 aa8.86□□□□□ -0.99
SEC13-204ENST00000397099 CYSLTR1Q9Y271 337 aa8.86□□□□□ -0.99
SEC13-204ENST00000397099 TGIF2-C20orf24A0A0A6YYL0 155 aa8.85□□□□□ -0.99
SEC13-204ENST00000397099 CHTF8P0CG12 524 aa8.85□□□□□ -0.99
SEC13-204ENST00000397099 MAJINQ3KP22 176 aa8.85□□□□□ -0.99
SEC13-204ENST00000397099 PAPPA-AS1Q5QFB9 102 aa8.85□□□□□ -0.99
SEC13-204ENST00000397099 Q6ZN92 141 aa8.85□□□□□ -0.99
SEC13-204ENST00000397099 TMEM141Q96I45 108 aa8.85□□□□□ -0.99
SEC13-204ENST00000397099 C2orf88Q9BSF0 95 aa8.85□□□□□ -0.99
SEC13-204ENST00000397099 IGHV3OR16-9A0A0B4J2B5 98 aa8.84□□□□□ -0.99
SEC13-204ENST00000397099 IGKV2-24A0A0C4DH68 120 aa8.84□□□□□ -0.99
SEC13-204ENST00000397099 LOC107984640A0A0U1RRK4 108 aa8.84□□□□□ -0.99
SEC13-204ENST00000397099 LOC389332A0A1B0GUA5 103 aa8.84□□□□□ -0.99
SEC13-204ENST00000397099 LINC01549A6NIU2 74 aa8.84□□□□□ -0.99
SEC13-204ENST00000397099 ADCYAP1P18509 176 aa8.84□□□□□ -0.99
SEC13-204ENST00000397099 RNF151Q2KHN1 245 aa8.84□□□□□ -0.99
SEC13-204ENST00000397099 TEX43Q6ZNM6 134 aa8.84□□□□□ -0.99
SEC13-204ENST00000397099 C5orf38Q86SI9 138 aa8.84□□□□□ -0.99
SEC13-204ENST00000397099 CAMK2N2Q96S95 79 aa8.84□□□□□ -0.99
SEC13-204ENST00000397099 STPG4Q8N801 248 aa8.83□□□□□ -1
SEC13-204ENST00000397099 FAM104AQ969W3 186 aa8.83□□□□□ -1
SEC13-204ENST00000397099 GNB1LQ9BYB4 327 aa8.83□□□□□ -1
SEC13-204ENST00000397099 IGLV4-3A0A075B6K6 122 aa8.82□□□□□ -1
SEC13-204ENST00000397099 A0A096LNI7 61 aa8.82□□□□□ -1
SEC13-204ENST00000397099 SPAG11BQ08648 103 aa8.82□□□□□ -1
SEC13-204ENST00000397099 RHEBQ15382 184 aa8.82□□□□□ -1
SEC13-204ENST00000397099 C2orf66Q6UXQ4 117 aa8.82□□□□□ -1
SEC13-204ENST00000397099 COMMD7Q86VX2 200 aa8.82□□□□□ -1
SEC13-204ENST00000397099 LINC01561Q8N1V8 128 aa8.82□□□□□ -1
SEC13-204ENST00000397099 MT-ND6P03923 174 aa8.81□□□□□ -1
SEC13-204ENST00000397099 SEC11AP67812 179 aa8.81□□□□□ -1
SEC13-204ENST00000397099 C10orf91Q5T1B1 145 aa8.81□□□□□ -1
SEC13-204ENST00000397099 LINC00526Q96FQ7 95 aa8.81□□□□□ -1
SEC13-204ENST00000397099 VCX2Q9H322 139 aa8.81□□□□□ -1
SEC13-204ENST00000397099 A0A087WZ39 114 aa8.8□□□□□ -1
SEC13-204ENST00000397099 NDUFA1O15239 70 aa8.8□□□□□ -1
SEC13-204ENST00000397099 PTTG1IPP53801 180 aa8.8□□□□□ -1
SEC13-204ENST00000397099 Q6ZRU5 148 aa8.8□□□□□ -1
SEC13-204ENST00000397099 ORAOV1Q8WV07 137 aa8.8□□□□□ -1
SEC13-204ENST00000397099 OPRPNQ99935 248 aaPredicted RBP8.8□□□□□ -1
SEC13-204ENST00000397099 MRPL35Q9NZE8 188 aaKnown RBP8.8□□□□□ -1
SEC13-204ENST00000397099 CARHSP1Q9Y2V2 147 aaKnown RBP8.8□□□□□ -1
SEC13-204ENST00000397099 FAT3Q8TDW7 4589 aa8.79□□□□□ -1
SEC13-204ENST00000397099 TIMM17AQ99595 171 aa8.79□□□□□ -1
SEC13-204ENST00000397099 IGIPA6NJ69 53 aa8.78□□□□□ -1
SEC13-204ENST00000397099 UBE2D1P51668 147 aa8.78□□□□□ -1
SEC13-204ENST00000397099 LINC00242Q5T6M2 205 aa8.78□□□□□ -1
SEC13-204ENST00000397099 FAM19A3Q7Z5A8 133 aa8.78□□□□□ -1
SEC13-204ENST00000397099 AMELXQ99217 191 aa8.78□□□□□ -1
SEC13-204ENST00000397099 LRP1Q07954 4544 aaKnown RBP8.78□□□□□ -1
SEC13-204ENST00000397099 TLX1NBP0CAT3 122 aa8.76□□□□□ -1.01
SEC13-204ENST00000397099 GAGE2BQ13066 116 aa8.76□□□□□ -1.01
SEC13-204ENST00000397099 NDUFA5Q16718 116 aa8.76□□□□□ -1.01
SEC13-204ENST00000397099 ERASQ7Z444 233 aa8.76□□□□□ -1.01
SEC13-204ENST00000397099 TOMM6Q96B49 74 aa8.76□□□□□ -1.01
SEC13-204ENST00000397099 RPS10P5Q9NQ39 176 aa8.76□□□□□ -1.01
SEC13-204ENST00000397099 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP8.75□□□□□ -1.01
SEC13-204ENST00000397099 HNRNPA3P51991 378 aaKnown RBP8.75□□□□□ -1.01
SEC13-204ENST00000397099 HERVK_113P63121 156 aa8.75□□□□□ -1.01
SEC13-204ENST00000397099 KIAA1644Q3SXP7 199 aa8.75□□□□□ -1.01
SEC13-204ENST00000397099 SERTAD4-AS1Q5TG53 156 aa8.75□□□□□ -1.01
SEC13-204ENST00000397099 ALKBH7Q9BT30 221 aaPredicted RBP8.75□□□□□ -1.01
SEC13-204ENST00000397099 TRBV30A0A0K0K1B3 111 aa8.74□□□□□ -1.01
SEC13-204ENST00000397099 LINC01546A6NGU7 62 aa8.74□□□□□ -1.01
SEC13-204ENST00000397099 RPL18AQ02543 176 aaKnown RBP8.74□□□□□ -1.01
SEC13-204ENST00000397099 PRSS2P07478 247 aa8.73□□□□□ -1.01
SEC13-204ENST00000397099 PRR3P79522 188 aaKnown RBP8.73□□□□□ -1.01
SEC13-204ENST00000397099 FABP9Q0Z7S8 132 aa8.73□□□□□ -1.01
SEC13-204ENST00000397099 Q6ZRP5 223 aa8.73□□□□□ -1.01
SEC13-204ENST00000397099 LINC00173Q6ZV60 143 aa8.73□□□□□ -1.01
SEC13-204ENST00000397099 SVBPQ8N300 66 aa8.73□□□□□ -1.01
SEC13-204ENST00000397099 PACRGQ96M98 296 aaPredicted RBP8.73□□□□□ -1.01
SEC13-204ENST00000397099 SCGB3A1Q96QR1 104 aa8.73□□□□□ -1.01
SEC13-204ENST00000397099 MRPL18Q9H0U6 180 aaKnown RBP8.73□□□□□ -1.01
SEC13-204ENST00000397099 GEMIN7Q9H840 131 aaKnown RBP8.73□□□□□ -1.01
SEC13-204ENST00000397099 SMCO4Q9NRQ5 59 aa8.73□□□□□ -1.01
SEC13-204ENST00000397099 SNAPINO95295 136 aa8.72□□□□□ -1.01
SEC13-204ENST00000397099 KIAA0087Q14695 138 aa8.72□□□□□ -1.01
SEC13-204ENST00000397099 FA2HQ7L5A8 372 aa8.72□□□□□ -1.01
SEC13-204ENST00000397099 CKS1BP61024 79 aa8.7□□□□□ -1.02
SEC13-204ENST00000397099 C9orf116Q5BN46 136 aaPredicted RBP8.7□□□□□ -1.02
SEC13-204ENST00000397099 C6orf226Q5I0X4 101 aa8.7□□□□□ -1.02
SEC13-204ENST00000397099 SPINK6Q6UWN8 80 aa8.7□□□□□ -1.02
SEC13-204ENST00000397099 UNQ6190/PRO20217Q6UXQ8 127 aa8.7□□□□□ -1.02
SEC13-204ENST00000397099 Q8IZM0 81 aa8.7□□□□□ -1.02
SEC13-204ENST00000397099 C6orf48Q9UBA6 75 aa8.7□□□□□ -1.02
SEC13-204ENST00000397099 A0A0J9YXV3 536 aa8.69□□□□□ -1.02
SEC13-204ENST00000397099 APOC3P02656 99 aa8.69□□□□□ -1.02
SEC13-204ENST00000397099 CXCL5P42830 114 aa8.69□□□□□ -1.02
SEC13-204ENST00000397099 TINCRA0A1B0GVN0 87 aa8.68□□□□□ -1.02
SEC13-204ENST00000397099 NDUFC2-KCTD14E9PQ53 114 aa8.68□□□□□ -1.02
SEC13-204ENST00000397099 C10orf25Q5T742 122 aa8.68□□□□□ -1.02
SEC13-204ENST00000397099 PLA2G2DQ9UNK4 145 aa8.68□□□□□ -1.02
SEC13-204ENST00000397099 TRAPPC1Q9Y5R8 145 aa8.68□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 71.1 ms