RNA–Protein interactions for RNA: ENST00000396832.5

CSNK1E-203, Transcript of casein kinase 1 epsilon, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CSNK1E, Length 2,791 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-203ENST00000396832 BBC3Q96PG8 261 aaPredicted RBP17.21■□□□□ 0.35
CSNK1E-203ENST00000396832 FAM222AQ5U5X8 452 aa17.2■□□□□ 0.34
CSNK1E-203ENST00000396832 ZNF702PQ9H963 129 aa17.2■□□□□ 0.34
CSNK1E-203ENST00000396832 C11orf44Q8N8P7 122 aa17.2■□□□□ 0.34
CSNK1E-203ENST00000396832 SMIM1B2RUZ4 78 aa17.18■□□□□ 0.34
CSNK1E-203ENST00000396832 J3KT08 172 aa17.18■□□□□ 0.34
CSNK1E-203ENST00000396832 LRRC75A-AS1Q8N1F1 130 aa17.18■□□□□ 0.34
CSNK1E-203ENST00000396832 MALP21145 153 aa17.18■□□□□ 0.34
CSNK1E-203ENST00000396832 PIK3CD-AS1Q5SR53 167 aa17.18■□□□□ 0.34
CSNK1E-203ENST00000396832 TMEM89A2RUT3 159 aa17.17■□□□□ 0.34
CSNK1E-203ENST00000396832 CRYGAP11844 174 aa17.17■□□□□ 0.34
CSNK1E-203ENST00000396832 C11orf72Q8NBR9 251 aa17.17■□□□□ 0.34
CSNK1E-203ENST00000396832 MAP6D1Q9H9H5 199 aa17.17■□□□□ 0.34
CSNK1E-203ENST00000396832 HIST1H4AP62805 103 aaKnown RBP17.16■□□□□ 0.34
CSNK1E-203ENST00000396832 HIST2H2BCQ6DN03 193 aa17.16■□□□□ 0.34
CSNK1E-203ENST00000396832 FAM19A5Q7Z5A7 132 aaPredicted RBP17.16■□□□□ 0.34
CSNK1E-203ENST00000396832 DYNLRB2Q8TF09 96 aa17.16■□□□□ 0.34
CSNK1E-203ENST00000396832 SETXQ7Z333 2677 aaKnown RBP17.15■□□□□ 0.34
CSNK1E-203ENST00000396832 TRGV1A0A0A0MS02 117 aa17.15■□□□□ 0.34
CSNK1E-203ENST00000396832 A0A1B0GX51 115 aa17.15■□□□□ 0.34
CSNK1E-203ENST00000396832 ATOX1O00244 68 aa17.15■□□□□ 0.34
CSNK1E-203ENST00000396832 LINC01356Q8N9X3 169 aa17.15■□□□□ 0.34
CSNK1E-203ENST00000396832 hADV29S1A0JD25 119 aa17.15■□□□□ 0.34
CSNK1E-203ENST00000396832 RS1O15537 224 aa17.12■□□□□ 0.33
CSNK1E-203ENST00000396832 IGKV3OR2-268A0A0C4DH90 116 aa17.12■□□□□ 0.33
CSNK1E-203ENST00000396832 A0A1W2PRX2 142 aa17.11■□□□□ 0.33
CSNK1E-203ENST00000396832 CYSTM1Q9H1C7 97 aa17.11■□□□□ 0.33
CSNK1E-203ENST00000396832 RPL28P46779 137 aaKnown RBP17.1■□□□□ 0.33
CSNK1E-203ENST00000396832 FN1P02751 2386 aaKnown RBP17.1■□□□□ 0.33
CSNK1E-203ENST00000396832 DNAL4O96015 105 aa17.1■□□□□ 0.33
CSNK1E-203ENST00000396832 INSP01308 110 aa17.09■□□□□ 0.33
CSNK1E-203ENST00000396832 C5orf47Q569G3 176 aa17.09■□□□□ 0.33
CSNK1E-203ENST00000396832 C9orf129Q5T035 196 aaKnown RBP17.09■□□□□ 0.33
CSNK1E-203ENST00000396832 TRAV13-2A0A0B4J235 113 aa17.09■□□□□ 0.33
CSNK1E-203ENST00000396832 SMIM9A6NGZ8 99 aa17.09■□□□□ 0.33
CSNK1E-203ENST00000396832 IGKV3D-7A0A0C4DH55 119 aa17.08■□□□□ 0.33
CSNK1E-203ENST00000396832 C14orf132Q9NPU4 83 aa17.08■□□□□ 0.33
CSNK1E-203ENST00000396832 RPL18AQ02543 176 aaKnown RBP17.08■□□□□ 0.32
CSNK1E-203ENST00000396832 F5H768 121 aa17.07■□□□□ 0.32
CSNK1E-203ENST00000396832 CRPP02741 224 aa17.07■□□□□ 0.32
CSNK1E-203ENST00000396832 Q6ZTI0 123 aa17.07■□□□□ 0.32
CSNK1E-203ENST00000396832 FAM19A3Q7Z5A8 133 aa17.07■□□□□ 0.32
CSNK1E-203ENST00000396832 RPS28P62857 69 aaKnown RBP17.06■□□□□ 0.32
CSNK1E-203ENST00000396832 LINC00337Q8N6G1 96 aa17.06■□□□□ 0.32
CSNK1E-203ENST00000396832 A0A087WYN8 130 aa17.06■□□□□ 0.32
CSNK1E-203ENST00000396832 PF4P02776 101 aa17.06■□□□□ 0.32
CSNK1E-203ENST00000396832 NTM-AS1Q6ZSK4 140 aa17.05■□□□□ 0.32
CSNK1E-203ENST00000396832 Q6YL49 198 aa17.05■□□□□ 0.32
CSNK1E-203ENST00000396832 UBR5O95071 2799 aaPredicted RBP17.03■□□□□ 0.32
CSNK1E-203ENST00000396832 LINC00846Q9NV44 126 aa17.03■□□□□ 0.32
CSNK1E-203ENST00000396832 MTORP42345 2549 aa17.03■□□□□ 0.32
CSNK1E-203ENST00000396832 Q96MF0 132 aa17.03■□□□□ 0.32
CSNK1E-203ENST00000396832 CR1P17927 2039 aa17.02■□□□□ 0.32
CSNK1E-203ENST00000396832 IGKV2-28A0A075B6P5 120 aa17.02■□□□□ 0.32
CSNK1E-203ENST00000396832 IGKV2D-28P01615 120 aa17.02■□□□□ 0.32
CSNK1E-203ENST00000396832 TOMM7Q9P0U1 55 aa17.02■□□□□ 0.32
CSNK1E-203ENST00000396832 A8MTW9 85 aa17.02■□□□□ 0.31
CSNK1E-203ENST00000396832 A0A087WVE0 104 aa17.01■□□□□ 0.31
CSNK1E-203ENST00000396832 ODF3L2Q3SX64 289 aa17.01■□□□□ 0.31
CSNK1E-203ENST00000396832 MIR7-3HGQ8N6C7 128 aa17.01■□□□□ 0.31
CSNK1E-203ENST00000396832 SMIM11BQ8TCY0 68 aa17.01■□□□□ 0.31
CSNK1E-203ENST00000396832 DEFB114Q30KQ6 69 aa17.01■□□□□ 0.31
CSNK1E-203ENST00000396832 OVOL2Q9BRP0 275 aa17.01■□□□□ 0.31
CSNK1E-203ENST00000396832 SND1-IT1Q9HBX3 110 aa17.01■□□□□ 0.31
CSNK1E-203ENST00000396832 A0A096LNT2 108 aa17■□□□□ 0.31
CSNK1E-203ENST00000396832 LOC100131303A0A0U1RQF7 123 aa17■□□□□ 0.31
CSNK1E-203ENST00000396832 STHQ8IWL8 128 aa17■□□□□ 0.31
CSNK1E-203ENST00000396832 C1orf158Q8N1D5 194 aa17■□□□□ 0.31
CSNK1E-203ENST00000396832 CDC42SE2Q9NRR3 84 aa17■□□□□ 0.31
CSNK1E-203ENST00000396832 Q6JHZ5 121 aa17■□□□□ 0.31
CSNK1E-203ENST00000396832 KIR2DL5BQ8NHK3 375 aa17■□□□□ 0.31
CSNK1E-203ENST00000396832 SERP2Q8N6R1 65 aa17■□□□□ 0.31
CSNK1E-203ENST00000396832 NBEAL2Q6ZNJ1 2754 aa16.99■□□□□ 0.31
CSNK1E-203ENST00000396832 PLA2G2AP14555 144 aa16.99■□□□□ 0.31
CSNK1E-203ENST00000396832 OR13C6PQ8NH95 151 aa16.98■□□□□ 0.31
CSNK1E-203ENST00000396832 WFDC10AQ9H1F0 79 aa16.98■□□□□ 0.31
CSNK1E-203ENST00000396832 NOP10Q9NPE3 64 aaKnown RBP16.98■□□□□ 0.31
CSNK1E-203ENST00000396832 TENM4Q6N022 2769 aa16.98■□□□□ 0.31
CSNK1E-203ENST00000396832 RPL36AP83881 106 aaKnown RBP16.98■□□□□ 0.31
CSNK1E-203ENST00000396832 RPL36ALQ969Q0 106 aaKnown RBP16.98■□□□□ 0.31
CSNK1E-203ENST00000396832 DPH3Q96FX2 82 aa16.97■□□□□ 0.31
CSNK1E-203ENST00000396832 ACANP16112 2415 aa16.97■□□□□ 0.31
CSNK1E-203ENST00000396832 K7EQD1 137 aa16.97■□□□□ 0.31
CSNK1E-203ENST00000396832 OBSCN-AS1Q96MR7 158 aa16.97■□□□□ 0.31
CSNK1E-203ENST00000396832 LINC01561Q8N1V8 128 aa16.96■□□□□ 0.31
CSNK1E-203ENST00000396832 ITPR3Q14573 2671 aa16.96■□□□□ 0.31
CSNK1E-203ENST00000396832 KRTAP10-9P60411 292 aa16.96■□□□□ 0.31
CSNK1E-203ENST00000396832 UPK3BQ9BT76 320 aa16.96■□□□□ 0.31
CSNK1E-203ENST00000396832 IGHV4-31P0DP07 118 aa16.95■□□□□ 0.3
CSNK1E-203ENST00000396832 TMEM258P61165 79 aa16.95■□□□□ 0.3
CSNK1E-203ENST00000396832 NCR3O14931 201 aa16.95■□□□□ 0.3
CSNK1E-203ENST00000396832 GCN1Q92616 2671 aaKnown RBP16.94■□□□□ 0.3
CSNK1E-203ENST00000396832 FLNAP21333 2647 aaKnown RBP16.94■□□□□ 0.3
CSNK1E-203ENST00000396832 H0YGX0 51 aa16.94■□□□□ 0.3
CSNK1E-203ENST00000396832 UBE2L6O14933 153 aa16.94■□□□□ 0.3
CSNK1E-203ENST00000396832 ZNF843Q8N446 348 aa16.94■□□□□ 0.3
CSNK1E-203ENST00000396832 USP17L23D6RBM5 183 aa16.94■□□□□ 0.3
CSNK1E-203ENST00000396832 LECT2O14960 151 aa16.94■□□□□ 0.3
CSNK1E-203ENST00000396832 LINC00158P58513 81 aa16.94■□□□□ 0.3
CSNK1E-203ENST00000396832 C11orf68Q9H3H3 251 aaKnown RBP16.94■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 78.9 ms