RNA–Protein interactions for RNA: ENST00000396603.6

CLTA-203, Transcript of clathrin light chain A, humanhuman

TSL 1 (best) BASIC

Gene CLTA, Length 1,090 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTA-203ENST00000396603 YPEL4Q96NS1 127 aa10.4□□□□□ -0.74
CLTA-203ENST00000396603 IGLV10-54A0A075B6I4 117 aa10.39□□□□□ -0.75
CLTA-203ENST00000396603 PANO1I0J062 215 aa10.39□□□□□ -0.75
CLTA-203ENST00000396603 RPL39P62891 51 aaKnown RBP10.39□□□□□ -0.75
CLTA-203ENST00000396603 MRPS36P82909 103 aaKnown RBP10.39□□□□□ -0.75
CLTA-203ENST00000396603 FA2HQ7L5A8 372 aa10.39□□□□□ -0.75
CLTA-203ENST00000396603 PYGO1Q9Y3Y4 419 aa10.39□□□□□ -0.75
CLTA-203ENST00000396603 NPSP0C0P6 89 aa10.38□□□□□ -0.75
CLTA-203ENST00000396603 CFAP161Q6P656 301 aa10.38□□□□□ -0.75
CLTA-203ENST00000396603 LINC00959A0A1B0GUT2 108 aa10.37□□□□□ -0.75
CLTA-203ENST00000396603 C1orf196B1AJZ1 125 aa10.37□□□□□ -0.75
CLTA-203ENST00000396603 MT1HL1P0DM35 61 aa10.37□□□□□ -0.75
CLTA-203ENST00000396603 RAB5BP61020 215 aa10.37□□□□□ -0.75
CLTA-203ENST00000396603 PAPPA-AS1Q5QFB9 102 aa10.37□□□□□ -0.75
CLTA-203ENST00000396603 C2orf66Q6UXQ4 117 aa10.37□□□□□ -0.75
CLTA-203ENST00000396603 Q6ZN92 141 aa10.37□□□□□ -0.75
CLTA-203ENST00000396603 SPACA4Q8TDM5 124 aa10.37□□□□□ -0.75
CLTA-203ENST00000396603 CHCHD10Q8WYQ3 142 aaPredicted RBP10.37□□□□□ -0.75
CLTA-203ENST00000396603 Q6ZUT4 128 aa10.36□□□□□ -0.75
CLTA-203ENST00000396603 A0A087WYN8 130 aa10.35□□□□□ -0.75
CLTA-203ENST00000396603 GAGE12HA6NDE8 117 aa10.35□□□□□ -0.75
CLTA-203ENST00000396603 LINC01546A6NGU7 62 aa10.35□□□□□ -0.75
CLTA-203ENST00000396603 TMEM141Q96I45 108 aa10.35□□□□□ -0.75
CLTA-203ENST00000396603 C2orf88Q9BSF0 95 aa10.35□□□□□ -0.75
CLTA-203ENST00000396603 PLAC8Q9NZF1 115 aa10.35□□□□□ -0.75
CLTA-203ENST00000396603 SLPIP03973 132 aa10.34□□□□□ -0.75
CLTA-203ENST00000396603 XCL1P47992 114 aa10.34□□□□□ -0.75
CLTA-203ENST00000396603 CD164L2Q6UWJ8 174 aa10.34□□□□□ -0.75
CLTA-203ENST00000396603 TRAV13-1A0A0B4J241 112 aa10.33□□□□□ -0.76
CLTA-203ENST00000396603 IFITM10A6NMD0 228 aa10.33□□□□□ -0.76
CLTA-203ENST00000396603 TEX43Q6ZNM6 134 aa10.33□□□□□ -0.76
CLTA-203ENST00000396603 C18orf32Q8TCD1 76 aa10.33□□□□□ -0.76
CLTA-203ENST00000396603 C7orf33Q8WU49 177 aa10.33□□□□□ -0.76
CLTA-203ENST00000396603 TOMM6Q96B49 74 aa10.33□□□□□ -0.76
CLTA-203ENST00000396603 PKIGQ9Y2B9 76 aa10.33□□□□□ -0.76
CLTA-203ENST00000396603 IGLV4-3A0A075B6K6 122 aa10.32□□□□□ -0.76
CLTA-203ENST00000396603 LINC00614P0C842 121 aa10.32□□□□□ -0.76
CLTA-203ENST00000396603 RNASE13Q5GAN3 156 aaKnown RBP10.32□□□□□ -0.76
CLTA-203ENST00000396603 C15orf56Q8N910 161 aa10.32□□□□□ -0.76
CLTA-203ENST00000396603 DPH3Q96FX2 82 aa10.32□□□□□ -0.76
CLTA-203ENST00000396603 TIMM17AQ99595 171 aa10.32□□□□□ -0.76
CLTA-203ENST00000396603 S100A1P23297 94 aa10.31□□□□□ -0.76
CLTA-203ENST00000396603 ERASQ7Z444 233 aa10.31□□□□□ -0.76
CLTA-203ENST00000396603 SCGB3A1Q96QR1 104 aa10.31□□□□□ -0.76
CLTA-203ENST00000396603 VCX2Q9H322 139 aa10.31□□□□□ -0.76
CLTA-203ENST00000396603 TNXBP22105 4242 aa10.3□□□□□ -0.76
CLTA-203ENST00000396603 COX7A2LO14548 114 aa10.3□□□□□ -0.76
CLTA-203ENST00000396603 FOXI1Q12951 378 aa10.3□□□□□ -0.76
CLTA-203ENST00000396603 GVQW2A0A096LPI5 108 aaPredicted RBP10.29□□□□□ -0.76
CLTA-203ENST00000396603 IGIPA6NJ69 53 aa10.29□□□□□ -0.76
CLTA-203ENST00000396603 COLCA2A8K830 154 aa10.29□□□□□ -0.76
CLTA-203ENST00000396603 TRGC2P03986 189 aa10.29□□□□□ -0.76
CLTA-203ENST00000396603 CHTF8P0CG12 524 aa10.29□□□□□ -0.76
CLTA-203ENST00000396603 MALP21145 153 aa10.29□□□□□ -0.76
CLTA-203ENST00000396603 OPRPNQ99935 248 aaPredicted RBP10.29□□□□□ -0.76
CLTA-203ENST00000396603 LINC00474Q9P2X8 69 aa10.29□□□□□ -0.76
CLTA-203ENST00000396603 IGHV1-58A0A0C4DH39 117 aa10.28□□□□□ -0.76
CLTA-203ENST00000396603 APOMO95445 188 aa10.28□□□□□ -0.76
CLTA-203ENST00000396603 SEC11AP67812 179 aa10.28□□□□□ -0.76
CLTA-203ENST00000396603 CHCHD1Q96BP2 118 aaKnown RBP10.28□□□□□ -0.76
CLTA-203ENST00000396603 HBDP02042 147 aa10.27□□□□□ -0.77
CLTA-203ENST00000396603 COX6A2Q02221 97 aa10.27□□□□□ -0.77
CLTA-203ENST00000396603 BAGE3Q86Y29 109 aa10.27□□□□□ -0.77
CLTA-203ENST00000396603 FAM104AQ969W3 186 aa10.27□□□□□ -0.77
CLTA-203ENST00000396603 AMELXQ99217 191 aa10.27□□□□□ -0.77
CLTA-203ENST00000396603 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP10.25□□□□□ -0.77
CLTA-203ENST00000396603 LINC01600Q96MT4 127 aa10.25□□□□□ -0.77
CLTA-203ENST00000396603 ZNF561-AS1K7EIQ3 104 aa10.24□□□□□ -0.77
CLTA-203ENST00000396603 SCO1O75880 301 aa10.24□□□□□ -0.77
CLTA-203ENST00000396603 ATP5LO75964 103 aa10.24□□□□□ -0.77
CLTA-203ENST00000396603 UBE2D1P51668 147 aa10.24□□□□□ -0.77
CLTA-203ENST00000396603 PRR3P79522 188 aaKnown RBP10.24□□□□□ -0.77
CLTA-203ENST00000396603 MAJINQ3KP22 176 aa10.24□□□□□ -0.77
CLTA-203ENST00000396603 HSBP1O75506 76 aa10.23□□□□□ -0.77
CLTA-203ENST00000396603 HIGD2BQ4VC39 106 aa10.23□□□□□ -0.77
CLTA-203ENST00000396603 STPG4Q8N801 248 aa10.23□□□□□ -0.77
CLTA-203ENST00000396603 URB1-AS1Q96HZ7 61 aa10.23□□□□□ -0.77
CLTA-203ENST00000396603 IGHV3OR16-9A0A0B4J2B5 98 aa10.22□□□□□ -0.77
CLTA-203ENST00000396603 LINC00242Q5T6M2 205 aa10.22□□□□□ -0.77
CLTA-203ENST00000396603 LINC00173Q6ZV60 143 aa10.22□□□□□ -0.77
CLTA-203ENST00000396603 C5orf38Q86SI9 138 aa10.22□□□□□ -0.77
CLTA-203ENST00000396603 GEMIN7Q9H840 131 aaKnown RBP10.22□□□□□ -0.77
CLTA-203ENST00000396603 IGKV2-24A0A0C4DH68 120 aa10.21□□□□□ -0.77
CLTA-203ENST00000396603 ATP6V1G1O75348 118 aa10.21□□□□□ -0.77
CLTA-203ENST00000396603 HERVK_113P63121 156 aa10.21□□□□□ -0.77
CLTA-203ENST00000396603 PMVKQ15126 192 aa10.21□□□□□ -0.77
CLTA-203ENST00000396603 FAM19A3Q7Z5A8 133 aa10.21□□□□□ -0.77
CLTA-203ENST00000396603 LINC01561Q8N1V8 128 aa10.21□□□□□ -0.77
CLTA-203ENST00000396603 OR10D4PQ8NGN7 298 aa10.21□□□□□ -0.77
CLTA-203ENST00000396603 A0A087WZ39 114 aa10.2□□□□□ -0.78
CLTA-203ENST00000396603 F8WDY8 70 aa10.2□□□□□ -0.78
CLTA-203ENST00000396603 SPINK6Q6UWN8 80 aa10.2□□□□□ -0.78
CLTA-203ENST00000396603 LRP2P98164 4655 aa10.2□□□□□ -0.78
CLTA-203ENST00000396603 A0A096LNI7 61 aa10.19□□□□□ -0.78
CLTA-203ENST00000396603 PMCHL1Q16048 86 aa10.19□□□□□ -0.78
CLTA-203ENST00000396603 PDZD11Q5EBL8 140 aa10.19□□□□□ -0.78
CLTA-203ENST00000396603 CST9LQ9H4G1 147 aa10.19□□□□□ -0.78
CLTA-203ENST00000396603 A0A096LNJ9 63 aa10.18□□□□□ -0.78
CLTA-203ENST00000396603 A0A0J9YXV3 536 aa10.18□□□□□ -0.78
CLTA-203ENST00000396603 REG3GQ6UW15 175 aa10.18□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms